# TF - SdhR: Daci_2428 3602871 Daci_2429 mdh 3602872 Daci_2430 tam 3602873 Daci_2431 citE 3602874 Daci_2432 Aave_2209 3602875 Daci_2433 acnB 3602870 Daci_2428 sdhR 3602869 Daci_2427 sdhC 3602868 Daci_2426 sdhD 3602867 Daci_2425 sdhA 3602866 Daci_2424 sdhB 3602865 Daci_2423 COG2938 3602864 Daci_2422 gltA 3605086 Daci_4617 aceA # TF - HexR: Daci_5676 3601261 Daci_0828 pgk 3606098 Daci_5599 zwf 3601363 Daci_0930 pykA 3606097 Daci_5598 pgi # TF - NadQ: Daci_1540 3601977 Daci_1541 nadC 3601978 Daci_1542 null 3602591 Daci_2150 nadA 3602590 Daci_2149 nadB # TF - NrtR: Daci_5757 3606257 Daci_5758 nrtX 3606258 Daci_5759 nrtY 3606256 Daci_5757 nrtR # TF - NrdR: Daci_4956 3601936 Daci_1501 nrdA 3601935 Daci_1500 nrdB # TF - NikR: Daci_3111 3603575 Daci_3112 omp_Ni 3603576 Daci_3113 nikK # TF - Zur: Daci_3951 3604413 Daci_3951 zur 3604412 Daci_3950 Aave_2810 3604411 Daci_3949 COG4531 3604410 Daci_3948 omr # TF - LldR: Daci_3345 3603808 Daci_3344 lldP 3603809 Daci_3345 lldR 3603810 Daci_3346 lldD 3603811 Daci_3347 dld # TF - NorR: Daci_1078 3601512 Daci_1078 norR 3601513 Daci_1079 hmp # TF - HutC: Daci_0148 3600563 Daci_0149 hutH 3600564 Daci_0150 hutU 3600565 Daci_0151 hutD 3600566 Daci_0152 hutI 3600567 Daci_0153 COG277 (GlcD) 3600568 Daci_0154 hisC 3600569 Daci_0155 hutF 3600570 Daci_0156 hutG 3600559 Daci_0145 hisX 3600560 Daci_0146 hisY 3600561 Daci_0147 hisZ 3600562 Daci_0148 hutC 3600508 Daci_0094 hisT # TF - IscR: Daci_4000 3604466 Daci_4000 iscR 3604465 Daci_3999 iscS 3604464 Daci_3998 iscU 3604463 Daci_3997 iscA 3604462 Daci_3996 hscB 3604461 Daci_3995 hscA 3604460 Daci_3994 fdx # TF - NtrC: Daci_4999 3605492 Daci_5002 glnA 3605491 Daci_5001 ntrZ 3605490 Daci_5000 ntrB 3605489 Daci_4999 ntrC 3602813 Daci_2371 nasD 3602812 Daci_2370 nasA 3602811 Daci_2369 ybiB 3602810 Daci_2368 cysG 3602819 Daci_2377 nrtA 3602818 Daci_2376 nrtB 3602817 Daci_2375 nrtC 3600715 Daci_0301 CHP02001 3600716 Daci_0302 glnK 3600717 Daci_0303 amtB # TF - ModE: Daci_1521 3601956 Daci_1521 modE 3601955 Daci_1520 modA 3601954 Daci_1519 modB 3601953 Daci_1518 modC # TF - LexA: Daci_3565 3604028 Daci_3565 lexA 3604730 Daci_4263 imuA 3604729 Daci_4262 imuB 3604728 Daci_4261 dnaE2 3606313 Daci_5814 PF08774 3606312 Daci_5813 PF06733 3602845 Daci_2403 PF04055 3601307 Daci_0874 recA 3601306 Daci_0873 recX # TF - LiuR: Daci_5993 3606491 Daci_5992 paaI 3606490 Daci_5991 liuA 3606489 Daci_5990 cah 3606488 Daci_5989 aceK 3606487 Daci_5988 ivdA 3606486 Daci_5987 null 3606485 Daci_5986 null 3606484 Daci_5985 ivdC 3606483 Daci_5984 Daci_5984 3606492 Daci_5993 liuR 3602832 Daci_2390 etfB 3602833 Daci_2391 etfA 3602834 Daci_2392 livK 3602835 Daci_2393 acdH 3605215 Daci_4744 paaH # TF - FadP: Daci_1336 3601770 Daci_1336 fadP 3601771 Daci_1337 acdH 3601772 Daci_1338 null 3601773 Daci_1339 acdB 3601774 Daci_1340 acdA 3601775 Daci_1341 null 3601776 Daci_1342 null 3601777 Daci_1343 echH 3602832 Daci_2390 etfB 3602833 Daci_2391 etfA 3602834 Daci_2392 null 3602835 Daci_2393 acdH2 3602836 Daci_2394 null 3604777 Daci_4310 etfD 3603777 Daci_3313 fadB 3603778 Daci_3314 fadA 3603779 Daci_3315 acdH3 # TF - VanR: Daci_1351 3601785 Daci_1351 vanR 3601786 Daci_1352 vanA # TF - PaaR: Daci_0571, Daci_0807 3601241 Daci_0808 paaZ 3601242 Daci_0809 paaK 3601243 Daci_0810 paaA 3601244 Daci_0811 paaB 3601245 Daci_0812 paaC 3601246 Daci_0813 paaD 3601247 Daci_0814 paaE 3600989 Daci_0568 paaF 3600990 Daci_0569 paaY 3600991 Daci_0570 paaK 3600992 Daci_0571 paaR 3600993 Daci_0572 livK 3600994 Daci_0573 livH 3600995 Daci_0574 livM 3600996 Daci_0575 livF # RNA - FMN 3602637 Daci_2196 ribH2 # RNA - TPP 3602755 Daci_2313 thiC 3603757 Daci_3293 thiO 3603756 Daci_3292 thiS 3603755 Daci_3291 thiG 3603754 Daci_3290 thiE 3604997 Daci_4530 PF04443 3604996 Daci_4529 PF05893 3604995 Daci_4528 thiZ 3604994 Daci_4527 thiX 3604993 Daci_4526 thiY 3604992 Daci_4525 oarX # TF - HrcA: Daci_5419 3602131 Daci_1694 rpoH 3606159 Daci_5660 groS 3606160 Daci_5661 groL # TF - GntR: Daci_3760 3604222 Daci_3760 gntR 3604223 Daci_3761 gntK 3604224 Daci_3762 gntY 3604225 Daci_3763 gntZ 3604226 Daci_3764 gntX 3604227 Daci_3765 edd 3604228 Daci_3766 eda # TF - SoxR: Daci_1189 3604357 Daci_3895 PF07690 3601622 Daci_1188 PF01042 3601621 Daci_1187 PF07690 3601623 Daci_1189 soxR # TF - MerR: Daci_0486 3600900 Daci_0485 merT 3600899 Daci_0484 merP 3600898 Daci_0483 merA # TF - CadR-PbrR: Daci_0478, Daci_2916 3600894 Daci_0479 cadA 3600895 Daci_0480 lspA 3603376 Daci_2915 cadA # RNA - SAH_riboswitch 3606418 Daci_5919 ahcY 3606417 Daci_5918 COG1189 3606416 Daci_5917 metF 3600646 Daci_0232 metH # TF - CueR: Daci_0034 3600449 Daci_0035 copZ 3600448 Daci_0034 cueR 3606223 Daci_5724 copA2 # TF - Aave_3515: Daci_5735 3606231 Daci_5732 null 3606232 Daci_5733 COG3181 3606233 Daci_5734 null 3606234 Daci_5735 Aave_3515 3606230 Daci_5731 COG3819 3606229 Daci_5730 COG3817 3606228 Daci_5729 pcp 3606227 Daci_5728 COG1540 3606226 Daci_5727 alhAB 3606225 Daci_5726 alhC # TF - Daci_3836: Daci_3836 3604298 Daci_3836 Daci_3836 # TF - UreR: Daci_5075, Daci_0231 3605567 Daci_5077 ureH 3600645 Daci_0231 ureR 3600644 Daci_0230 ureA 3600643 Daci_0229 ureB 3600642 Daci_0228 ureC 3600641 Daci_0227 ureD 3605566 Daci_5076 ureT 3605565 Daci_5075 ureR2 # TF - MetR: Daci_5860 3606359 Daci_5860 metR # TF - FruR2: Daci_2662 3603118 Daci_2663 fruB 3603119 Daci_2664 fruK 3603120 Daci_2665 fruA 3603117 Daci_2662 fruR2 # TF - PdxW: Daci_2817 3603273 Daci_2818 PF00583 # TF - Daci_1890: Daci_1890 3602327 Daci_1891 COG697 # TF - ModE2: Daci_4259 3604345 Daci_3883 modA 3604344 Daci_3882 modB 3604726 Daci_4259 modE2 3604727 Daci_4260 COG1720 # TF - PdxQ3: Daci_2843 3603299 Daci_2844 COG2050 # TF - PdxQ2: Daci_5878 3606376 Daci_5877 COG0346 3606375 Daci_5876 phzF 3606377 Daci_5878 pdxQ2 # TF - Daci_0595: Daci_0595, Daci_3668 3604129 Daci_3667 PF01810 3601015 Daci_0594 PF01810 3601014 Daci_0593 COG1167 # TF - YdcR: Daci_2454 3602891 Daci_2449 COG0348 # TF - GabR: Daci_5048 3605539 Daci_5049 gabT 3605540 Daci_5050 gabD # TF - Daci_3053: Daci_3053, Daci_3062 3603516 Daci_3053 Daci_3053 3603517 Daci_3054 dld2 3603515 Daci_3052 sgaA 3603514 Daci_3051 tctC 3603513 Daci_3050 tctB 3603512 Daci_3049 tctA # TF - PdxQ: Daci_2224 3602665 Daci_2223 pdxO2 # TF - PdxR: Daci_3711 3604172 Daci_3710 PF03594 3604171 Daci_3709 PF01168 3604170 Daci_3708 PF00202 3604169 Daci_3707 glyA # TF - Daci_4286: Daci_4286 3604754 Daci_4287 PF00797 # TF - Aave_3430: Daci_5367 3605862 Daci_5368 null 3605861 Daci_5367 Aave_3430 # TF - Daci_0288: Daci_0288 3600701 Daci_0287 mvaA 3600700 Daci_0286 null 3600699 Daci_0285 null # TF - TauR: Daci_2022, Daci_5672 3606170 Daci_5671 odpA 3606169 Daci_5670 oppB 3606168 Daci_5669 oppC 3606167 Daci_5668 oppD 3606166 Daci_5667 oppF 3606165 Daci_5666 COG1574 3606164 Daci_5665 COG0523 3602457 Daci_2019 tauY 3602458 Daci_2020 tauX 3602459 Daci_2021 gabP # TF - GguR: Daci_0253 3600668 Daci_0254 gudD2 3600669 Daci_0255 tctC2 3600670 Daci_0256 garD 3600671 Daci_0257 uxuL2 3600666 Daci_0252 tctC1 3600665 Daci_0251 kdgD 3600664 Daci_0250 tctC3 3600663 Daci_0249 serA 3600662 Daci_0248 gudD 3600661 Daci_0247 kgsD 3600667 Daci_0253 gguR # TF - TalR: Daci_4288 3604755 Daci_4288 talR 3604756 Daci_4289 tctC 3604757 Daci_4290 talD