# TF - HexR: Mmwyl1_1082
>Mmwyl1_1080(edd) Score=5.4 Pos=-145 [Marinomonas sp. MWYL1]
TTGTAAAAAAATTACAA
>Mmwyl1_1080(edd) Score=5.1 Pos=-74 [Marinomonas sp. MWYL1]
ATGTAGTAATATTACAT
>Mmwyl1_1079(gapA) Score=5.1 Pos=-310 [Marinomonas sp. MWYL1]
ATGTAATATTACTACAT
>Mmwyl1_1079(gapA) Score=5.4 Pos=-239 [Marinomonas sp. MWYL1]
TTGTAATTTTTTTACAA
>Mmwyl1_1079(gapA) Score=4.1 Pos=-74 [Marinomonas sp. MWYL1]
ATGTAGTATTTTTACGT
>Mmwyl1_1037(glk) Score=5.4 Pos=-101 [Marinomonas sp. MWYL1]
TTGTAATTTTATTACAT
>Mmwyl1_1037(glk) Score=4.4 Pos=-39 [Marinomonas sp. MWYL1]
TTGTTGTAAAATTTCAA
>Mmwyl1_0723(gpmM) Score=5.4 Pos=-69 [Marinomonas sp. MWYL1]
CTGTAATTAAATTACAA
>Mmwyl1_3958(gapB) Score=5.3 Pos=-90 [Marinomonas sp. MWYL1]
TTGTAGTGTTCTTACAA
>Mmwyl1_1405(ppsA) Score=4.7 Pos=-192 [Marinomonas sp. MWYL1]
TTGAAATAAAACTACAT
>Mmwyl1_2926(prpB) Score=4.8 Pos=-122 [Marinomonas sp. MWYL1]
TCGTAATTTACTTACAA
>Mmwyl1_2805(gltA) Score=4.6 Pos=-163 [Marinomonas sp. MWYL1]
CTGTCAGATAATTACAA
>Mmwyl1_3504(pckA) Score=4.3 Pos=-281 [Marinomonas sp. MWYL1]
TGGTAGAAAGCCTACAG
>Mmwyl1_3504(pckA) Score=4.3 Pos=-133 [Marinomonas sp. MWYL1]
TGGTAATAAAATAACAT
>Mmwyl1_2307(aceE) Score=4 Pos=-219 [Marinomonas sp. MWYL1]
TgGaAATAAaATTAaAA
# TF - BirA: Mmwyl1_4292
>Mmwyl1_3458(COG1040) Score=8.4 Pos=15 [Marinomonas sp. MWYL1]
CTGTCAACA--------------GGTTTACAA
>Mmwyl1_3457(bioB) Score=8.4 Pos=-85 [Marinomonas sp. MWYL1]
TTGTAAACC--------------TGTTGACAG
# TF - NrdR: Mmwyl1_4051
>Mmwyl1_2996(nrdA) Score=5.6 Pos=-87 [Marinomonas sp. MWYL1]
ACACTACATATAGTGT
>Mmwyl1_2996(nrdA) Score=4.6 Pos=-55 [Marinomonas sp. MWYL1]
ACACTACATACAGTAA
# TF - Zur: Mmwyl1_0292
>Mmwyl1_1446(yciC) Score=6.6 Pos=-39 [Marinomonas sp. MWYL1]
GAAATGTTATATCATAACATTTT
>Mmwyl1_0929(PF08856) Score=5.8 Pos=-18 [Marinomonas sp. MWYL1]
AAAATGTTATAACGTAACATGTT
>Mmwyl1_0929(PF08856) Score=4.6 Pos=-23 [Marinomonas sp. MWYL1]
TTTGTAAAATGTTATAACGTAAC
>Mmwyl1_0291 Score=5.2 Pos=-51 [Marinomonas sp. MWYL1]
TACTTGTTATATCATAACAAAAT
>Mmwyl1_1122 Score=5.9 Pos=-40 [Marinomonas sp. MWYL1]
GTATTGTTACGTTATAACATTAA
# TF - LldR: Mmwyl1_0071
>Mmwyl1_0071(lldR) Score=5.3 Pos=-78 [Marinomonas sp. MWYL1]
AATTGGTTTTACCACTT
>Mmwyl1_0071(lldR) Score=6.1 Pos=-186 [Marinomonas sp. MWYL1]
AATTGGTAAGACCAATT
>Mmwyl1_0072(dld) Score=6.5 Pos=-84 [Marinomonas sp. MWYL1]
AATTGGTCTTACCAATT
>Mmwyl1_0072(dld) Score=5.4 Pos=-192 [Marinomonas sp. MWYL1]
AAGTGGTAAAACCAATT
# TF - NorR: Mmwyl1_0067
>Mmwyl1_0066(hmp) Score=5.1 Pos=-178 [Marinomonas sp. MWYL1]
TCGTGTCAATTTGACTCAA
>Mmwyl1_0066(hmp) Score=4.8 Pos=-134 [Marinomonas sp. MWYL1]
GTGAGTCTTATTGACTCTA
>Mmwyl1_0067(norR) Score=4.8 Pos=-35 [Marinomonas sp. MWYL1]
TAGAGTCAATAAGACTCAC
>Mmwyl1_0067(norR) Score=5.1 Pos=9 [Marinomonas sp. MWYL1]
TTGAGTCAAATTGACACGA
# TF - PrpR: Mmwyl1_0926
>Mmwyl1_0926(prpR) Score=5.4 Pos=-30 [Marinomonas sp. MWYL1]
ATTGTCAACAAT
>Mmwyl1_0926(prpR) Score=4.7 Pos=-268 [Marinomonas sp. MWYL1]
ATTGTCGACACA
>Mmwyl1_0926(prpR) Score=5.8 Pos=-83 [Marinomonas sp. MWYL1]
ATTGTCGACAAT
# TF - HutC: Mmwyl1_3905
>Mmwyl1_2465(COG3314) Score=5.1 Pos=-4 [Marinomonas sp. MWYL1]
TAATATGTATATACATGTTG
>Mmwyl1_2465(COG3314) Score=4 Pos=-212 [Marinomonas sp. MWYL1]
TGCTATGTATAGACAACCTT
>Mmwyl1_3903(hutF) Score=5.3 Pos=-65 [Marinomonas sp. MWYL1]
ATACTTGTATATACATTATA
>Mmwyl1_3903(hutF) Score=5.1 Pos=-249 [Marinomonas sp. MWYL1]
GAACATGTATATACAATTAC
>Mmwyl1_3905(hutC) Score=4.5 Pos=-73 [Marinomonas sp. MWYL1]
CTAGATGTATAGACAAGTTG
>Mmwyl1_3902(hutU) Score=5.6 Pos=-257 [Marinomonas sp. MWYL1]
TATAATGTATATACAAGTAT
>Mmwyl1_3902(hutU) Score=5.1 Pos=-73 [Marinomonas sp. MWYL1]
GTAATTGTATATACATGTTC
# TF - IscR: Mmwyl1_1343
>Mmwyl1_1343(iscR) Score=5.5 Pos=-93 [Marinomonas sp. MWYL1]
ATAACCTACTAAAATAGTCAGGTAA
>Mmwyl1_1343(iscR) Score=5.3 Pos=-68 [Marinomonas sp. MWYL1]
ATACTTGATCAAAACAGTAGGATTT
>Mmwyl1_1012(erpA) Score=6.3 Pos=-66 [Marinomonas sp. MWYL1]
ATACTTGACTAAATTACTCGGATAA
>Mmwyl1_2344(nfuA) Score=5.3 Pos=-93 [Marinomonas sp. MWYL1]
ATACCCTACTTTTTTACTTGGTCTT
# TF - NagQ: Mmwyl1_1647
>Mmwyl1_1651(nagT) Score=-0.9 Pos=-86 [Marinomonas sp. MWYL1]
AATACCTAAAAAATACCA
>Mmwyl1_1651(nagT) Score=-0.5 Pos=-192 [Marinomonas sp. MWYL1]
AAAACCAATATAGAACCA
>Mmwyl1_1652(nagB) Score=4.9 Pos=-49 [Marinomonas sp. MWYL1]
TGGTTCTATATTGGTTTT
>Mmwyl1_1652(nagB) Score=6.2 Pos=-155 [Marinomonas sp. MWYL1]
TGGTATTTTTTAGGTATT
# TF - NtrC: Mmwyl1_0734
>Mmwyl1_0735(ntrB) Score=5.4 Pos=-74 [Marinomonas sp. MWYL1]
TGCACTATAATTGTGCA
>Mmwyl1_0736(glnA) Score=4.3 Pos=-252 [Marinomonas sp. MWYL1]
CGCACCAACATGGAACA
>Mmwyl1_0736(glnA) Score=4.8 Pos=-221 [Marinomonas sp. MWYL1]
TGATCTAAAATGGTGCA
>Mmwyl1_3656(glnK) Score=4.5 Pos=-208 [Marinomonas sp. MWYL1]
CGCACCAAGTTAACGCA
# TF - TrpR: Mmwyl1_0659
>Mmwyl1_0659(trpR) Score=4.3 Pos=-45 [Marinomonas sp. MWYL1]
TGTACTAGTACATGAATACA
# TF - UxuR: Mmwyl1_2785
>Mmwyl1_2784(uxuP) Score=4.4 Pos=-136 [Marinomonas sp. MWYL1]
ATTTTGGTCAACTAACTT
>Mmwyl1_2783(uxuQ) Score=4.6 Pos=-90 [Marinomonas sp. MWYL1]
AAGTTAGTTGACCAAAAT
>Mmwyl1_2784(uxuP) Score=5.6 Pos=-114 [Marinomonas sp. MWYL1]
AGATTGGTTGACCAAATT
>Mmwyl1_2783(uxuQ) Score=5.4 Pos=-112 [Marinomonas sp. MWYL1]
AATTTGGTCAACCAATCT
>Mmwyl1_3059(bglX) Score=4.4 Pos=-163 [Marinomonas sp. MWYL1]
TTAAAGGTGGACCAAATT
# TF - ModE: Mmwyl1_0976
>Mmwyl1_0979(modA) Score=6.6 Pos=-73 [Marinomonas sp. MWYL1]
TTCGTTATATAGTTCAATATATAACGAA
# TF - LexA: Mmwyl1_2117
>Mmwyl1_3966(recN) Score=5.6 Pos=-50 [Marinomonas sp. MWYL1]
TACTGTATAAATAACCATAT
>Mmwyl1_3732(recA) Score=6 Pos=-87 [Marinomonas sp. MWYL1]
TACTGTTTTTATATACAGTA
>Mmwyl1_3784(dinB) Score=5.3 Pos=-37 [Marinomonas sp. MWYL1]
AACTGTGTTTTTATACAGTA
>Mmwyl1_2117(lexA) Score=5.8 Pos=-44 [Marinomonas sp. MWYL1]
TGCTGTATATAATAACAGTA
>Mmwyl1_3691(yebG) Score=6.2 Pos=-42 [Marinomonas sp. MWYL1]
AACTGTATATTTATACAGTA
>Mmwyl1_2188(ruvC) Score=5 Pos=-43 [Marinomonas sp. MWYL1]
GGCTGTTGAAATATACAGTA
>Mmwyl1_1981(umuD) Score=6 Pos=-35 [Marinomonas sp. MWYL1]
TACTGTATATCTATACAGTA
>Mmwyl1_2469(umuD) Score=5.6 Pos=-34 [Marinomonas sp. MWYL1]
TACTGTACGAATATACAGTC
>Mmwyl1_0398(PF04055) Score=6 Pos=-34 [Marinomonas sp. MWYL1]
TACTGTTTATATATACAGCA
>Mmwyl1_3275(topB) Score=6.5 Pos=-29 [Marinomonas sp. MWYL1]
TACTGTATATATAAACAGTA
>Mmwyl1_4249(uvrA) Score=5.7 Pos=-73 [Marinomonas sp. MWYL1]
TACTGTAAAAATAGACAGTT
# TF - RutR: Mmwyl1_1423
>Mmwyl1_1566(pbuT) Score=4.9 Pos=-117 [Marinomonas sp. MWYL1]
TACTGACCAAATGATCAGTT
>Mmwyl1_1677(guaD) Score=4 Pos=-62 [Marinomonas sp. MWYL1]
GTATAACCATTCGGTCAAAC
>Mmwyl1_1926(ppuA) Score=4.5 Pos=-185 [Marinomonas sp. MWYL1]
TATTAACTAGTCGGTCAGAT
>Mmwyl1_0632(ppuB) Score=4.1 Pos=-64 [Marinomonas sp. MWYL1]
TTTTGACCAGTTAGGCAGGG
>Mmwyl1_2699(xdhA) Score=5 Pos=-83 [Marinomonas sp. MWYL1]
ATTTGTACGATTGGTCAGGT
# TF - VanR: Mmwyl1_1295
>Mmwyl1_1295(vanR) Score=5.5 Pos=-195 [Marinomonas sp. MWYL1]
ATTGGATCCAAT
>Mmwyl1_1295(vanR) Score=5.4 Pos=-143 [Marinomonas sp. MWYL1]
ATTGGATCCATT
>Mmwyl1_1295(vanR) Score=3.7 Pos=-134 [Marinomonas sp. MWYL1]
ATTTGATGCATA
>Mmwyl1_1295(vanR) Score=5.5 Pos=-74 [Marinomonas sp. MWYL1]
ATTGGATCCAAT
>Mmwyl1_1296(vanA) Score=5.5 Pos=-161 [Marinomonas sp. MWYL1]
ATTGGATCCAAT
>Mmwyl1_1296(vanA) Score=3.7 Pos=-101 [Marinomonas sp. MWYL1]
TATGCATCAAAT
>Mmwyl1_1296(vanA) Score=5.4 Pos=-92 [Marinomonas sp. MWYL1]
AATGGATCCAAT
>Mmwyl1_1296(vanA) Score=5.5 Pos=-40 [Marinomonas sp. MWYL1]
ATTGGATCCAAT
# RNA - TPP
>Mmwyl1_2392(thiC) Score=79.8 Pos=-287 [Marinomonas sp. MWYL1]
GCCCTACTTGTCGGAGTGCCATTTGGCTGAGATCGCATAATTAAATGCGGGATCCGCAGAACCTGATCGGGCTAATACCCGCGTAGGAAACAAGAAAGTATCTATT
>Mmwyl1_3472(thiB) Score=72.8 Pos=-200 [Marinomonas sp. MWYL1]
TCATTATCTCATGGGGTGCTTTAGCATTTGGTAAATGTTAGAGCTGAGAAGCAGATTGTCTGCTAACCCACCGAACCTGATCCAGATCATGCTGGCGTAGGAATCGAGATAGCAAGTTGAA
# RNA - FMN
>Mmwyl1_1372(ribH) Score=121.1 Pos=-284 [Marinomonas sp. MWYL1]
ACTTCGTTCTCGGGGCGGGGTGTAATTCCCCACCGGCGGTAAAGACTTTACATAAGTTAAATTCTAAGCCCGCGAGCGCCTTCAAGAAACTTTTCTTTTAGGGTCAGCAGATCTGGTGTAATTCCAGAGCCGACGGTTATAGTCCGGATGATAGAGAGCGCGT
>Mmwyl1_0168(emrE) Score=106.5 Pos=-295 [Marinomonas sp. MWYL1]
TCGAACTTCGGGGCGGGGCGAAATTCCCCACCGGCGGTGATTTGCTTGATTGAATAATCCAGTAAACAGCCCGCGAGCGCCTTGTTGCTTAAAGATATGTCTTTTTAGCAACAAGGGTCAGCAGATCTGGTGAGACTCCAGAGCCGACGGTTACAGTCCGGATGATAGAAGATCGACCA
# TF - GntR: Mmwyl1_0694
>Mmwyl1_0698(gntX) Score=5.6 Pos=-123 [Marinomonas sp. MWYL1]
AAATGTTATCGGTAACATCA
>Mmwyl1_0698(gntX) Score=5.7 Pos=-100 [Marinomonas sp. MWYL1]
TCTAGTTACCGGTAACATTT
# TF - SoxR: Mmwyl1_1995
>Mmwyl1_1994(PF07690) Score=6.3 Pos=-122 [Marinomonas sp. MWYL1]
ACCTCAACTTAAGTTCAGGT
# TF - ZntR: Mmwyl1_3329
>Mmwyl1_1611(zntA) Score=5.4 Pos=-60 [Marinomonas sp. MWYL1]
ACCTTGGACTATTATCCAAGGT
# TF - HpxS: Mmwyl1_0471
>Mmwyl1_0471(hpxS) Score=4.2 Pos=-116 [Marinomonas sp. MWYL1]
TATTGTGCACAATT
>Mmwyl1_0471(hpxS) Score=4.2 Pos=-29 [Marinomonas sp. MWYL1]
CATCGTATACAATT
>Mmwyl1_0471(hpxS) Score=4.4 Pos=-252 [Marinomonas sp. MWYL1]
AATTGTATACAATG
# TF - XltR: Mmwyl1_1984
>Mmwyl1_1985(xltC) Score=5.7 Pos=-124 [Marinomonas sp. MWYL1]
TGATGTTATCGTTAACATTT
>Mmwyl1_1985(xltC) Score=4.8 Pos=-74 [Marinomonas sp. MWYL1]
GAATGTGAATGTTAACGTTA
>Mmwyl1_1985(xltC) Score=6.3 Pos=-68 [Marinomonas sp. MWYL1]
GAATGTTAACGTTAACATTA
>Mmwyl1_1984(xltR) Score=6.3 Pos=-187 [Marinomonas sp. MWYL1]
TAATGTTAACGTTAACATTC
>Mmwyl1_1984(xltR) Score=4.8 Pos=-181 [Marinomonas sp. MWYL1]
TAACGTTAACATTCACATTC
>Mmwyl1_1984(xltR) Score=5.7 Pos=-131 [Marinomonas sp. MWYL1]
AAATGTTAACGATAACATCA
# TF - MetR: Mmwyl1_3390
>Mmwyl1_0387(PF08908) Score=5.4 Pos=-169 [Marinomonas sp. MWYL1]
ATGAATAATATTCAT
>Mmwyl1_0387(PF08908) Score=4 Pos=-149 [Marinomonas sp. MWYL1]
TTAAAATAAATTCAT
>Mmwyl1_2283(glyA) Score=4.8 Pos=-95 [Marinomonas sp. MWYL1]
ATGATCTTTTTTCAT
# TF - Mmwyl1_0258: Mmwyl1_0258
>Mmwyl1_0259(COG697) Score=13.3 Pos=-111 [Marinomonas sp. MWYL1]
AATTGTATTGC-(8)-CCATAACAGTT-(6)-AATTGTGTCGG
# TF - Mmwyl1_0910: Mmwyl1_0910
>Mmwyl1_0911(PF00892) Score=8.3 Pos=-208 [Marinomonas sp. MWYL1]
AATTGTACTCT-------------------ATCTGTGTTCT
# TF - MED92_15328: Mmwyl1_3154
>Mmwyl1_3153 Score=8 Pos=-115 [Marinomonas sp. MWYL1]
ATCTGTGCCTA-------------TATTGTGCCTG
# TF - Mmwyl1_4437: Mmwyl1_4437
>Mmwyl1_4438(COG0235) Score=14.6 Pos=-95 [Marinomonas sp. MWYL1]
ATCTGGACCA-(13)-ATCTGGATGT-(6)-TGGTCCAGAT
# TF - YjiR: Mmwyl1_1450
>Mmwyl1_1451(PF01810) Score=16.1 Pos=-381 [Marinomonas sp. MWYL1]
TACAGAT-(17)-TACAGTG-(13)-CACTGTA-(23)-ATCTGTA