# TF - HisR: Csac_2311
>Csac_2027(hisZ) Score=5.6 Pos=-37 [Caldicellulosiruptor saccharolyticus DSM 8903]
CACTTCATCATGATAAAGCA
# TF - Rex: Csac_1220
>Csac_1534(echA) Score=5 Pos=-45 [Caldicellulosiruptor saccharolyticus DSM 8903]
TTGTTAACAAATTAACTT
>Csac_1220(rex) Score=5.2 Pos=-39 [Caldicellulosiruptor saccharolyticus DSM 8903]
ATGTCAAAAAAATATCAA
>Csac_1860(hydC) Score=5.2 Pos=-38 [Caldicellulosiruptor saccharolyticus DSM 8903]
ATGTTAAATTTCTAACAA
>Csac_2425 Score=5.5 Pos=-187 [Caldicellulosiruptor saccharolyticus DSM 8903]
ATGTTATAATATTAACAA
>Csac_0622(adhA3) Score=5.1 Pos=-30 [Caldicellulosiruptor saccharolyticus DSM 8903]
ATGTTAATTTTTTAACAG
>Csac_0622(adhA3) Score=4.7 Pos=-53 [Caldicellulosiruptor saccharolyticus DSM 8903]
ATGTTTATATAATAATAA
>Csac_0622(adhA3) Score=4.8 Pos=-70 [Caldicellulosiruptor saccharolyticus DSM 8903]
TTGACAAAAAACAAACAA
>Csac_0407(adhA2) Score=5.6 Pos=-46 [Caldicellulosiruptor saccharolyticus DSM 8903]
ATGTTAAAATTATAACAA
# RNA - FMN
>Csac_0794(ribD) Score=114.9 Pos=-248 [Caldicellulosiruptor saccharolyticus DSM 8903]
GTCCATCCTTCGGGGCGGGGTGAAATTCCCCACTGGCGGTAAAAGCCCGCGAGCAAAAGCCTTTCTGGCTTTTGCAGAACCGGTGGAATTCCGGTGCCAACGGTTACAGTCCGGATGGGAGAAGGAATGG
# RNA - TPP
>Csac_0250(thiS) Score=61.9 Pos=-296 [Caldicellulosiruptor saccharolyticus DSM 8903]
TGGTTTTAAGGGGGAGCTGAGCGGGGCAAAGCTCGGCTGAGAGTAGGCACTAAAAAATCCCCGTGCCTTGACCCTTTGAACCTGATCCGGGTAATGCCGGCGAAGGGAGGAAAAGTGCAAAAAATAA
# TF - Csac_2497: Csac_2497
>Csac_2497(Csac_2497) Score=6.1 Pos=-45 [Caldicellulosiruptor saccharolyticus DSM 8903]
TGTATATACTGTATATATACAGTATGCAAAAGGGGAAAG
>Csac_2497(Csac_2497) Score=7.6 Pos=-54 [Caldicellulosiruptor saccharolyticus DSM 8903]
AATTAAAACTGTATATACTGTATATATACAGTATGCAAA
# TF - MalR2: Csac_1228
>Csac_0427(malF) Score=5.6 Pos=-46 [Caldicellulosiruptor saccharolyticus DSM 8903]
AAGAGCAAACGATTGCACAC
>Csac_0426(amyB) Score=5.8 Pos=-93 [Caldicellulosiruptor saccharolyticus DSM 8903]
TTATGCAAACATTTGCATTA
# TF - KojR: Csac_0443
>Csac_0438(pgmB) Score=4.8 Pos=-71 [Caldicellulosiruptor saccharolyticus DSM 8903]
TATTGAAAACAATTCGAAAA
>Csac_0440(kojE) Score=5.2 Pos=-53 [Caldicellulosiruptor saccharolyticus DSM 8903]
TGTCGAAAACATTTCCGAAA
# TF - IolR: Csac_1171
>Csac_1172(iolG3) Score=6 Pos=-38 [Caldicellulosiruptor saccharolyticus DSM 8903]
TTATGTAATCAATTACACTA
>Csac_1172(iolG3) Score=4.8 Pos=-72 [Caldicellulosiruptor saccharolyticus DSM 8903]
CGTTGTAATTGATTACACTA
# TF - Csac_2166: Csac_2166
>Csac_2166(Csac_2166) Score=7.5 Pos=-50 [Caldicellulosiruptor saccharolyticus DSM 8903]
AGTGTTATATAATTATATAACACT
# RNA - MOCO_RNA_motif
>Csac_0972(tupB) Score=77.9 Pos=-216 [Caldicellulosiruptor saccharolyticus DSM 8903]
TTTGAAAATCTTTCCGAGCCATTGCAACCTAAAAAGAGGGGTTTTTCCCTCTTCATGGTGCTTTGGCCGATAGGGTGCAGGTTTGGGAAACCACTGCGCCTCCCGCTTTGGAAAGGAAAGATTTAAAGGATACTCT
# TF - BirA: Csac_0109
>Csac_0304(bioY3) Score=7.6 Pos=-73 [Caldicellulosiruptor saccharolyticus DSM 8903]
TAGTAAAC----------------GTTGACAT
>Csac_0198(bioY2) Score=7 Pos=-48 [Caldicellulosiruptor saccharolyticus DSM 8903]
TAGTAAAC----------------GTTTACTT
>Csac_0307(bioB) Score=6.3 Pos=-102 [Caldicellulosiruptor saccharolyticus DSM 8903]
CAGTAAAT----------------GTTTACTA
# TF - HrcA: Csac_1750
>Csac_1291(groS) Score=7.6 Pos=-54 [Caldicellulosiruptor saccharolyticus DSM 8903]
TTAGCACTCACTCTCAATGAGTGCTAA
>Csac_1750(hrcA) Score=7.4 Pos=-43 [Caldicellulosiruptor saccharolyticus DSM 8903]
TTAGCACTCATCAAATGAGAGTGCTAA
# TF - ArgR: Csac_1897
>Csac_1814(argG) Score=5.4 Pos=-63 [Caldicellulosiruptor saccharolyticus DSM 8903]
TTGAATAATTATTCAT
>Csac_1531(argC) Score=5.2 Pos=-71 [Caldicellulosiruptor saccharolyticus DSM 8903]
TTGTATTTTTATACAC
>Csac_2227(carA) Score=5.2 Pos=-111 [Caldicellulosiruptor saccharolyticus DSM 8903]
TTGTATTTTTATTCAT
# TF - YhcF: Csac_0140
>Csac_0140(yhcF) Score=6.8 Pos=-43 [Caldicellulosiruptor saccharolyticus DSM 8903]
AGTGTATTATTTAATTAACACACT
# TF - PdxR: Csac_1035
>Csac_1035(pdxR) Score=9.9 Pos=-78 [Caldicellulosiruptor saccharolyticus DSM 8903]
CGTATCGATATA-----------------------------------------------------------------------TGTATCGATACA
>Csac_1036(pdxS) Score=11.2 Pos=-108 [Caldicellulosiruptor saccharolyticus DSM 8903]
TGTATCGATACA-----------------------------------------------------------------------TATATCGATACG
# TF - HcpR: Csac_1623
>Csac_1623(hcpR) Score=6.6 Pos=-44 [Caldicellulosiruptor saccharolyticus DSM 8903]
GGTAACATATGTTACA
>Csac_1624(frdX) Score=6.6 Pos=-77 [Caldicellulosiruptor saccharolyticus DSM 8903]
TGTAACATATGTTACC
# TF - Fur: Csac_1741
>Csac_1739(feoA) Score=6.2 Pos=-98 [Caldicellulosiruptor saccharolyticus DSM 8903]
ATTGAGAATAATTCTCAAT
>Csac_0536(ftr) Score=5.8 Pos=-37 [Caldicellulosiruptor saccharolyticus DSM 8903]
AGTGAAAATCAATTTCAAA
>Csac_0536(ftr) Score=5.3 Pos=-43 [Caldicellulosiruptor saccharolyticus DSM 8903]
ATTGAAAGTGAAAATCAAT
# TF - NrdR: Csac_2057
>Csac_0774(nrdD) Score=5.6 Pos=-83 [Caldicellulosiruptor saccharolyticus DSM 8903]
ACACAATATATAGTGG
>Csac_0774(nrdD) Score=5.1 Pos=-115 [Caldicellulosiruptor saccharolyticus DSM 8903]
ATATAATATATTGTGT