# RNA - Cobalamin
>null(cobT) Score=95.9 Pos=-429 [Clostridium phytofermentans ISDg]
AAAATATAATGTAGAGAGGTGCCTTGGCATGATTTATAGCCAAGGATAATAGGGAAATGGGTGAAAAATCCCATGCGGTCCCGCCGCTGTAATGGAAGAGCATACTTCACTTACGAATGTAGGACATGTCACTGAGTAATCGGGAAGACTGTAGTATGTGCTGAAGCCAAAGCCAGAAGACCTGCCTCACTATAAGAAATAACACA
>null(btuF) Score=107.9 Pos=-401 [Clostridium phytofermentans ISDg]
AATAATTGCGACCATGTGGTGCTTCTTAATATAAGTTAAAAGGGAATGTGGTGAAAATCCACAGCAGCCCCCGTTACTGTCAATGGAATGAAAATTGCGGAAGTGTCATTGTATCTTCTTTAGCGTTAAGGATACGGCTCCTAGCCTTAAAAAGCGAAGAATGATATGAGAAGACAGCAATGAGTAAAATGACCATGAGCCAGGAAACCTGCCATATGAGAATGAATCATCTG
>null(cbiQ) Score=50.2 Pos=-371 [Clostridium phytofermentans ISDg]
GAAGTTGGGTGCAATTCCCACACAGGAGCGCTACTGTGATAACGGAGCAGTTTTCGAAAAGAACCTGAATAGTATGTTCTTTGACCACTGGAAGTAATTCTGGGAAGGTGAAAAATTTGCGGTGATGTTTAAGTCAGAATACAT
>null(hemA) Score=109.4 Pos=-362 [Clostridium phytofermentans ISDg]
ACAATTTAGATCTTTAAGGTGCTTGGTGTCATGCCGTTAGGTATTGAAGTCCAAGATAATAGGGAAATGGGTGAAAATCCCATACGGTCTCGCCGCTGTGAAGGAAGAATCATATCTTGAATATCACTGTGTAAAATTACATGGGAAGATGAGATATGGTGTTGACGCCTGAGTCAGAAGACCTGCCTTAAGATAGTTTTTACACTT
# RNA - FMN
>null(ribU) Score=94.2 Pos=-395 [Clostridium phytofermentans ISDg]
AAGTTCTTCGGGGCAGGGGGTAGTTCCCGACCGGCGGTATAGTCCGCGACCGAGTTAATCTCGTTGATTTGGTGACAGTAAGGAAAGATTACTGAATTCCAAAACCGACAGTATAGTCTGGATGAAAGAAGAAGTTTGT
# RNA - GEMM_RNA_motif
>null(CLOBOL_02760) Score=62.8 Pos=-99 [Clostridium phytofermentans ISDg]
AACGATAATAGCAAACCTAGTGAAAACTAGCGACGCAAAACTATAGGGTCTTCCTTAGATATTCTAAGATGATAGCCAGTTACCGAAAG
>null(Cphy_1136) Score=67.3 Pos=-229 [Clostridium phytofermentans ISDg]
TATAAATTTAGCAAACTAATTGAAAGATTAGGACGCAAAGCTATGGGTCTAAGGATATCATAATATCAACGATTGCCAGGTTACAGAAAA
# RNA - L10_leader
>null(rplJ) Score=84.5 Pos=-180 [Clostridium phytofermentans ISDg]
GCTTAATTCTCACAAACTGCCGAAGACAGTAGGTGCCGTAATGGCATAAGGTGAGACCGCCTACCGAGGAATAGATTAATCAAGCTAATATGCTAGACTAATAATCTGTCTCCTGTTTTCGCAGGAGGCAGTTTTTTTTATTCCGT
# RNA - L20_leader
>null(infC) Score=26.5 Pos=-218 [Clostridium phytofermentans ISDg]
ATAGCAAGTAGAGTATCCACTCTCACCCCAAGCAATAGGCGAACGGGTTACAATTTTCTTAAGTACACAATGATAGAACTAGGTTCTAAGATAGATTGTGTCGTTTATGAGATTTGAAAGTGGATAGCGTGCTATTCACTTTTTTTGTATGTTAA
# RNA - Lysine
>null(dapA) Score=108.2 Pos=-298 [Clostridium phytofermentans ISDg]
AACAATTGGTAGAGGTGCATCAATTATCAGTAAACAATCGGATATGTCAGGCATAGATGAGGATTTGTTGAAAGGATGAGATGCCGAAGCTTTAGATATCCTGAGTATGTAAGGCTGGTCGTATGATGAAGAATCATGGGACTGTCATCAAGTTATTGATGGAGAGCTACCTAAAGA
>null(lysW) Score=100.1 Pos=-312 [Clostridium phytofermentans ISDg]
ACATTGATAGAGGTGCAACAATTATGAGTACCCCATCCGTAATCAGGCTTTGGATGATGGGAAAGGAATTGCTGCCGAAGTGGTCTTTCGCTGCCTGTGAGTAAAGACTGCTGGTCTAATGCAGAATATGTATCAGACTGTCACATGATATAAAACAAGCAAAGAACAAATCCTTGCTTGTATGTGGAGCGCTATCATTACTGA
# RNA - PreQ1
>null(queT) Score=19.3 Pos=-55 [Clostridium phytofermentans ISDg]
TTAAACCGTGTGTTCGGGACCTTCCACACGTAAAACAAAACTAAAGGAGA
# RNA - SAM
>null(metK) Score=62 Pos=-242 [Clostridium phytofermentans ISDg]
TCTCTTATTCAGAGTGACGGAGAGTAAAGACTCAGTGAAGTCACGGCAACCCCCTATGGGAAGGTGCTAAGTTGAGCGAGCAATCGAACAATGAGAG
# RNA - T-box(Ala)
>null(alaS) Score=100.8 Pos=-307 [Clostridium phytofermentans ISDg]
AAAAGGCAAGGAAGAGAAATAGTATATATCGTGGAAGTTTCAGAGAGAGGATGAAAGGTGCGAATCCTTACAGAAATGATATAGAAGCAGTCTTGGAGCTGTGAACCGAACAGAGTAATCTAAGTAGATTTCACCGGATTTCCACCGTTATAGGGAAAAAGTATCGGAGCAATCCCGTACTGGTGAGAGCAGAGTAAAATCTGAAATTAGGTGGTAACACGGACAGAATAGTTCGCCCTAAGCTA
# RNA - T-box(Asn)
>null(aspS2) Score=57.2 Pos=-442 [Clostridium phytofermentans ISDg]
GAAAGGCAATGAAGGAGACTTTAGTACACAGATGTGTTTAGCGACAGGAATGATACGTCACCGACTGAGAGCGTGTCTTTGACTCTATGTGTATTACGGAACACTCTGGAGCTCGTGAATTGAATCGATATCGGTCGGTAGTAGGTTCATGCGTCGCACGCGTTAAGTGTCAAGAGTGGAGAAGCAAGGTGTTTCTCAACGTGGGTGGTACCGCGGGAATCTTTGGGCAATTATGTGGCTTGTGATTTTTATAAAGTCTGCTTGCCTTATGTACATAGAATTCTCGTCCCGGAATA
# RNA - T-box(Cys)
>null(cysE) Score=114.4 Pos=-370 [Clostridium phytofermentans ISDg]
GTGAAAAGCATTGATCGGAAAGAGTAGCTTATTCTGAAATCACAGAGAGGGAATGTCACCGGCTGAAAGCATTCTTGAATTTCTTATAAGCGAAGTGCATCCGTGAGCTGGTTAGGCGAAGAGAGTAGCTTAACTCGGTTACAGCCGTTACCTGTTTTGAGCTCGCTATTATGCGAATTTGAGTGGAACCGCGGATTACTTCGTCTCTTAG
# RNA - T-box(Gly)
>null(glyS) Score=104 Pos=-394 [Clostridium phytofermentans ISDg]
AAACAGCGTTGATAAGGAATATTATATATTCACTTGATTTCAGAGAGAGAATGGTTGGTGCGAATTCTTAAGATGGTGATATAAAAGGCGCCTTTGAGCTATGGATTGAACAGGAAATTCCTTAGTAGATACCATCGGAATCCCACCGTTATCTTCGGGAACAGCATAAAGATGATACACTTTCTCGTGCTGATAAAGTGCAGATTAAGCAAGATAAACCAGTAACTGATTTACTTGTAAATATCTGAATTTAGGTGGTACCGCGGATTATATTCGCCCTAAGCTA
# RNA - T-box(Ile)
>null(ileS) Score=68.6 Pos=-380 [Clostridium phytofermentans ISDg]
TGTAAAGACGTTGACGAAGAGAGTAAGAATTCTTAAAAATCACAGCGAGCTGCAGAGAGTGTGAGTGCAGTAGGAGTAGGGAATTTCTGAAAATCACTTTATCAGTTGCAACATTGAACCGTAGTTAGTAGGTGTTGTCGGGTTCTACCGTTATATAGATAATGTATAACAGACTTAGTCTGCGTACGTGAAATAGGTGGTATAATGAAGCATTCCTGCTCTCATCCTGTTT
# RNA - T-box(Leu)
>Cphy_3171(leuA2) Score=109.9 Pos=-421 [Clostridium phytofermentans ISDg]
GAAAAATACTTGGAAAAGGAATAGTAACCGTACTAGGATTTTCAGAGACTTGCTGGTTGGTGCGAAGCAAGAATCAAAATAGGGTGAACTCGCCTTGGAGTAGCTGACTGAAAAATTACAGTAGGTTAAGCCGGAATCCCACCGTTATAAGGGATAGATATTGACCATAAATGATGTATCGAAGGAACACGTAAGAGTGGTATAGCAGAGTAACTTCTGTCTCTTTG
>null(leuS) Score=127.6 Pos=-266 [Clostridium phytofermentans ISDg]
AAAAAGTTATGATTAGAAGTAGTAAAAGTAGGTTCCAGTAACAGAGAGTTATCGGTAGGTGGAAGATAATCTGGGAAGCTTTGAACTCGTCTATGAACTCTGAGGTTGAACATAAGTAGACCTTAGCGGGAATTCCCGTTATAGAATTTAAGTGCAGGGTTAGCCCTGAATTAGAGTGGTACCGCGGTAGGTTTATCCTTTCGTCTCTTTATT
# RNA - T-box(Met)
>null(metS) Score=87.1 Pos=-416 [Clostridium phytofermentans ISDg]
AAAATGCTGAGAAAAGAAGAGTATATATGGAATGCTGAACAGAGAACCTTGCCGGAAGAAATTCTTAAGTGCTGAGAGCAGGGGACAGTGGAACATATAGAAGATGGTCTTGGAGCTGCGTAGCTGAGGTTTTAAGCTTAGGTTACGACGTATTCACACGTTAACGTGAGAGACTGTGTTAGCAGTCGGTAAGATACTAGCTGAAAAGTTAGTATGAATTAAAGTGGCACCACGGGAGATACTCTCGTCTTTAAATA
# RNA - T-box(Phe)
>null(pheS) Score=86.4 Pos=-499 [Clostridium phytofermentans ISDg]
GAAAAAGGCTATGAAGGTGTTGCCACAGGCAACCAGATTAAACTTTTCTATCAGAGAGAGGAAGTCATCGGCTGAAAGCTTCCTTAAGTTCAAAGTTTAGTTGATTTTCTCACCGGAGCCGCATATTTGAATTTGTTAATCAACCTCCACAAAATTAAAGTCACAGGGTTAACATTAGTAGGATATGACGTATATGCACGTTACGCATGACTTAAGTGCCTATGATAATTTTTGTTTTTATTATAGGAATTAGGGTGGTACCGCGGGTAGCTTTTATACTCCGTCCCTGTT
# RNA - T-box(Pro)
>null(proS2) Score=110.3 Pos=-344 [Clostridium phytofermentans ISDg]
GAAAGTTGCGATGAAGAGGAATAGTATATAGGTAAGTCATTTTAGAGAGAGAGTGGCTGGTGAAAACTCTTATGAAGCCGAATAGAACCTACCTTGGAGCACTGTACGCTATAAATATAGCATACGTTATGATAATAACATATCGTATAAAATACAGCGTAAATCGGCGTTAACGATAGGAGTGAATTGCGCAAGCAATTAATTTGGGTGGTACCACCGAAGTTTCGGTCCCTTGT
# RNA - T-box(Ser)
>null(serS) Score=97.5 Pos=-392 [Clostridium phytofermentans ISDg]
TCACGGTGATGATAAAAGCTACGATTTTTGTATTTGTTCAGAGAGCTGATGGTTGGTGTGAATCGGTCAAAGAAAAAATCTATCCACTTTTGGAGCCGGCAGTGAAAGCTGCAAGGTTAGTACCCTTTAGCGTACTTTATTGAGTGGCCGGTTTAACGGCAATTTGGGTGGCAACGCGGAATCCTTTCGTCCCATGTAA
# RNA - T-box(Thr)
>null(thrZ) Score=93.7 Pos=-298 [Clostridium phytofermentans ISDg]
AAGAAAAGCAATGACGGAAAGAGTAGTTTATCGGAAACATACAGAGAGAAAAACATTAGGTGGAAGTTTTTCATGAAGGAAGATAGACGAAAACCATTCCAGAGCTGTAGCGCTGAAACATAGTATGCGCTACCGTATGCCTGCGTTAAAGGATAGGATTTGATAGAATCTGAAGTGAAAAGTTAAGGTGGAACCGTGCAATAGGATTATTTGCACCCTTAAG
>null(thrS) Score=97.1 Pos=-309 [Clostridium phytofermentans ISDg]
ATAATACGTTGATGAGAAGAGTAAATTGTGGAGTATTTCAGAGAGGAATACAGTAGCTGAAAGTATTCTAATGCAGAAGCAATTGAAGACTACCTCGGAGTGGCCCTAATCCGGCCCGGTGATTCCGTTACCATCGAATGAAGCCGGGATATCAAAGCATAGCTTTTATGTCCAATAAGGGTGGAACCGCGAGTGATACTCGTCCCTTTCGA
# RNA - T-box(Trp)
>null(trpS) Score=108.9 Pos=-326 [Clostridium phytofermentans ISDg]
AGATAAACCGATGATCAAGAGGAGTACATAAGTAAGGAGTTTTCAGAGAGCTGTTGTAGGTGGGAATACAGTAACGAGAACTTATGGAATGGACTTGTGAGGGCAACTTGAAACCGTAAGGAAGTAGATGTTGACGGAACCCCGGCCGTTATTAATGGGACTGCAATGAAAAACGTTGCAGATAGAGAGGGTGCTTTTGCACCAATCTGGGTGGTACCGCAGAAGTTTAGGCTTTTGTCCCTGAA
>null(trpB2) Score=85.2 Pos=-446 [Clostridium phytofermentans ISDg]
TTTAAAACCGTTGACGAAGAGTAAGTACTTTTAGAAACTTGCTTTAAAGAGAGCTACAGATGGTGAGATTGTGGTAGGTAAAGGCTAAAAGGAATGGGCTTTGGAGGGCAAACTGAAATTTAGTAGGTGAGCCGGAGATAACCTCCGTTATCAAAGATAAGCATATGTTTGTATGCATAGAGTGGACGTTTAACGTCAAGCTGGGTGGCACCGCAGAAGTTCGATACTTTTGTCCCTGCA
# RNA - T-box(Tyr)
>null(tyrZ) Score=108 Pos=-425 [Clostridium phytofermentans ISDg]
CATAGGCTATGATAAGAAAGAGTAAAAATCATTGTAATCTAACAGAAAGTTGCCGGTAGATGAGAGGCGCAAGAGAGCAGATTTTGAATACATCTTTGAGCTTCACACCGAACGACTATAATAGTTTAAGTAGGCTGTTGACGGTATCCTGCACCCGTTATCGTGCTAGAGTATAACCATCGGTAAGGATGAGTACTCGAAGAGATTAGCTGTGCGAACAGTTAATAAAATTGAGGTGGTAACGCGTGATAATATCCCGCCCTCTGAAG
# RNA - T-box(Val)
>Cphy_3348(ilvD) Score=50.4 Pos=-348 [Clostridium phytofermentans ISDg]
ACTTATAGCCATATGGTACAGGAGTGCTTATGTACCGGGAAGTAGCCTCGGAGCTTTGAACCGAACAGTAGTTACTTAGTAGGCTTCAACGGATGTCCACCGTTAAAAGGAAACAGTATTGGTTCTGCTTCATAAGGAGCAACCTGTACTGTAGAGAGCAGAAGAAATTCTGAAATTAGGTGGTACCACGGATATTACGTTCGCCCTAAGC
>null(valS) Score=90.1 Pos=-455 [Clostridium phytofermentans ISDg]
TAAATGTAGTGATGGAGAGGATTACATAAGTAACCTTGTCAGAGATAACAATCCATTGGCTGTGAGGTTGTTTCAAGTAGTGCTTATCGAAGGTAGCTCCGGAACAGTGTTTCTGAAACTTTAAGTAGCGTGTAGGAAATGCCGGGAAGTCCCGTTATAGACGAGCGTTTTATATGAAATGCGAAAAAGGTGAATATTAGAAAAATTCTTACTGTCACAATTGGCGACAAGATAAGAAATGTTTCTTTTCACAAATTAAGGTGGTACCACGGTTCTTCGTCCTTATCGG
# RNA - glmS
>null(glmS) Score=67 Pos=-209 [Clostridium phytofermentans ISDg]
AGATAAAATTAGCGCCATGTACCTCTATTGGACGGGAAATTTAGAGGTTAACGAGGTAGGGAGTTAGCGAATCTTCGGCGGATGCTCTCTCGTACAGTTTGAGTGCGTAAGGTGCTGAAAAAATGGCAGGTAACTGCAGCACAACAGCAGTACTATCAAACAACA
# RNA - TPP
>null(thiT) Score=71.8 Pos=-145 [Clostridium phytofermentans ISDg]
ATTGTATTGCTGGGGGAGCCGAATTGGCTGAGAAGTAGACACCTACTGACCCTTATTACTTGATCCAGTTAGTACTGGCGTAAGGAAGCACCAAACGTCCTCC
# RNA - ydaO-yuaA
>null(nhaP) Score=75.1 Pos=-273 [Clostridium phytofermentans ISDg]
ATGAAACAAATCCGAATATCTTTATGGTAGTGGGGGAACCAATTTCAGGGGTGAATCTTAGTATTTTAAGAGGGGCAGCTTGGGAGCCCTAATCCGTCAGCTAATCCCATAGGAGAATACCAAGCGAATGACG
# RNA - yybP-ykoY
>null(atcL) Score=27.1 Pos=-437 [Clostridium phytofermentans ISDg]
ATCCAGTATAGTGGGGGAGTAATTCACGTAAACATTTGTTTACGCGGCAATTTCCAACATCATGGCTTCGTGCCTGGCTTGCCTTAGAGAATGAGACTCATGTATAACTT
>null(atcL) Score=45.7 Pos=-321 [Clostridium phytofermentans ISDg]
TAAAATACTCGTGAGGGAGTAGTTTGCGTAGATTTCTACGTGCCAAGTCAACATACTGACTGTAAAAAGTCTGGCTTGTCTTAATAAACGAGACTCATGTATAGCTT
>null(COG1971) Score=43.6 Pos=-199 [Clostridium phytofermentans ISDg]
ATATCTACTGGTAAGGGAGTAGTTAGCAAGATGTGTAGTATAGTCAACACAATGATAGATTCTATCTGGTTATACTTTGAATAACGAGACTTATTTGTGGCAA