# TF - NagR: LSL_1263
>LSL_1466(nagA) Score=5.5 Pos=-146 [Lactobacillus salivarius subsp. salivarius UCC118]
GTTTTGGTCTATACCAATTA
>LSL_1466(nagA) Score=5.2 Pos=-93 [Lactobacillus salivarius subsp. salivarius UCC118]
TTCATGGTCTATACCATTTA
>LSL_1627(glmS) Score=5.1 Pos=-58 [Lactobacillus salivarius subsp. salivarius UCC118]
ATCAAGGTCTATACCAATTT
>LSL_1465(nagB) Score=5.2 Pos=-92 [Lactobacillus salivarius subsp. salivarius UCC118]
TAAATGGTATAGACCATGAA
>LSL_1465(nagB) Score=5.5 Pos=-39 [Lactobacillus salivarius subsp. salivarius UCC118]
TAATTGGTATAGACCAAAAC
# TF - CcpA: LSL_0420
>LSL_1296(LSL_1296) Score=4.3 Pos=-76 [Lactobacillus salivarius subsp. salivarius UCC118]
AAGGAAGCGGTAACAA
>LSL_0137(hcaD) Score=3.8 Pos=-56 [Lactobacillus salivarius subsp. salivarius UCC118]
GTGAAAACGTTCTATA
>LSL_0153(pdhA) Score=4 Pos=-216 [Lactobacillus salivarius subsp. salivarius UCC118]
GTGATAACGATAACAA
>LSL_0110(glpK) Score=4.4 Pos=-149 [Lactobacillus salivarius subsp. salivarius UCC118]
GAATAAGCGTTTTCAT
>LSL_0110(glpK) Score=4.8 Pos=-43 [Lactobacillus salivarius subsp. salivarius UCC118]
AAGAAAACGTTTTCTT
>LSL_1806(rpiA) Score=4.1 Pos=-18 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGAAAGGGGTATAAT
>LSL_1633(dhaK) Score=5 Pos=-64 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGAAAGCGTTTATAT
>LSL_0560(manO) Score=4.2 Pos=-71 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGTAAGCATTTACGA
>LSL_0654(manL) Score=4.3 Pos=-131 [Lactobacillus salivarius subsp. salivarius UCC118]
TAGTAAGTGTTTTCAA
>LSL_0654(manL) Score=4.1 Pos=-61 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGAAAAGGCTTTATT
>LSL_0086(manL) Score=4.3 Pos=-109 [Lactobacillus salivarius subsp. salivarius UCC118]
TAGAAATCGTTTACAC
>LSL_0153(pdhA) Score=4.5 Pos=-67 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGTAAGCGTTATATA
>LSL_1294(glgB) Score=4 Pos=-88 [Lactobacillus salivarius subsp. salivarius UCC118]
GTGAAAGCTATTTCTT
>LSL_0135(adc) Score=4.3 Pos=-140 [Lactobacillus salivarius subsp. salivarius UCC118]
TAGTAATCGTTTTCAC
>LSL_0381(galK) Score=4.3 Pos=-44 [Lactobacillus salivarius subsp. salivarius UCC118]
AATAAAACGTTTTCTT
>LSL_1881(sufC) Score=4.2 Pos=-181 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGTAAGCGTTATTCT
>LSL_1620(mtlA) Score=4.2 Pos=-56 [Lactobacillus salivarius subsp. salivarius UCC118]
CAGTAAACGTTATCAT
>LSL_1751(rhaY) Score=4.6 Pos=-73 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGAAAACGGTTAATA
>LSL_1372(spxB) Score=4.6 Pos=-53 [Lactobacillus salivarius subsp. salivarius UCC118]
AAGAAAACGTTTGCAA
>LSL_1613(pmi) Score=4.2 Pos=-39 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGAAAGTGTATACAT
>LSL_0395(pck) Score=4.4 Pos=-46 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGAAAGCGTATTATA
>LSL_1117(lulA) Score=4.5 Pos=-69 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGAAAGCGAATTTAA
>LSL_1748(adhX) Score=4.4 Pos=-31 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGTAAACGATGTCAA
>LSL_1298(gabD) Score=4.3 Pos=-37 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGTAAGCGTACTCAA
>LSL_0388(ptsH) Score=4.2 Pos=-68 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGTAAACGTGTTCTT
>LSL_0388(ptsH) Score=4.1 Pos=-91 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGTTATCGTTTGCAT
>LSL_0065(scrB) Score=4.5 Pos=-33 [Lactobacillus salivarius subsp. salivarius UCC118]
AAGAATACGTTTACAA
>LSL_0065(scrB) Score=4.1 Pos=-121 [Lactobacillus salivarius subsp. salivarius UCC118]
ATTTAACCGCTTTTTT
>LSL_0419(pepQ) Score=4 Pos=-125 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGCAAGCGTTTCATA
>LSL_1300(lp_0827) Score=4.3 Pos=-200 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGACACCGCTTACAG
>LSL_1513(treR) Score=4.2 Pos=-130 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGAAATTGTTTACAA
>LSL_1512(treP) Score=4.1 Pos=-27 [Lactobacillus salivarius subsp. salivarius UCC118]
AAGAAAAGGTTTTCAG
>LSL_1512(treP) Score=4.5 Pos=-96 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGTAAACAATTTCAT
>LSL_0376(lacLM) Score=4.5 Pos=-32 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGTAAGCATTTTCTT
>LSL_0066(scrA) Score=4.2 Pos=-52 [Lactobacillus salivarius subsp. salivarius UCC118]
CATTAAGCGTTTTCAA
>LSL_0134(ydgI) Score=4.9 Pos=-150 [Lactobacillus salivarius subsp. salivarius UCC118]
TTTAAAACGTTTTCAT
>LSL_0134(ydgI) Score=4.5 Pos=-43 [Lactobacillus salivarius subsp. salivarius UCC118]
GTGAAAACGATTACTA
>LSL_0135(adc) Score=5 Pos=-33 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGAAAACGTTTTAAA
>LSL_1894(sorD) Score=4.3 Pos=-63 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGTAACCGTTAACAC
>LSL_1538(coaA) Score=4.2 Pos=-75 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGAAAGCGTAATATT
>LSL_1282(malT) Score=4.5 Pos=-59 [Lactobacillus salivarius subsp. salivarius UCC118]
AAGAATGCGATTTCAT
# TF - PurR: LSL_0315
>LSL_0515(purE) Score=4.1 Pos=-68 [Lactobacillus salivarius subsp. salivarius UCC118]
AAATTCGAATTTT
>LSL_0315(purR) Score=5.4 Pos=-116 [Lactobacillus salivarius subsp. salivarius UCC118]
AAAAACGAACTTT
>LSL_0663(purC) Score=5.2 Pos=-27 [Lactobacillus salivarius subsp. salivarius UCC118]
AAAGACGAACAAT
>LSL_1139(guaC) Score=5.6 Pos=-130 [Lactobacillus salivarius subsp. salivarius UCC118]
AAACACGAACATT
# RNA - L10_leader
>LSL_1238(rplJ) Score=75.1 Pos=-156 [Lactobacillus salivarius subsp. salivarius UCC118]
GGTCAAGTTAATAATTCTACCTAAGACTCAGGTGGCTAACGCCTTAAATTTATGCCTGCCGAGGAGTAAACGTATCTCTCTCTGTGTCTTGGTGTGGACATAGAGCTTTTTATTTATAAAA
# RNA - TPP
>LSL_1668(thiT) Score=65.9 Pos=-175 [Lactobacillus salivarius subsp. salivarius UCC118]
ACTAGCACAAGGGGAGCCTTTTTGGCTGAGAGTGAAGTTATTCAGACCCTTTGAACCTGTTCGTTAATGCGAGCGTAGGAATGTGTAGTAAATCAGATAT
# RNA - FMN
>LSL_0937(ribU) Score=98.4 Pos=-238 [Lactobacillus salivarius subsp. salivarius UCC118]
TAGGTGTCTTCAGAGGCAGGGTGAAATTCCCGACCGGCGGTGAAAGTCCGAGAGCTGCTATTGTATATAGTGGTTGAACTGGTTCGATTCCAGTACCGACAGTATAGTCTGGATAAAAGAAGATGAGC
# RNA - PyrR
>LSL_0190(pyrB) Score=48.3 Pos=-303 [Lactobacillus salivarius subsp. salivarius UCC118]
AAACCTTTAAGAATAGTCCAGAGAGGCTAAGAAGGAAGCGTCTTTTTTAAGAGCTCGGATAAAGTATACTGATTGAAGCATAGTTAATTACTGTGATCTTCTATTTATACCTACGCTTAGTTTGGACAATTCTAAACTAAGTGTTTTTTTTA
>LSL_0190(pyrB) Score=37.7 Pos=-135 [Lactobacillus salivarius subsp. salivarius UCC118]
AAACCATTTAATTGTTTCCAGAGAGTGCAAAAAGGTTTTATAAGATGCGATATAACTGTATACAAATGGATGTCGTATAAACTTTTACCCCGGAAATGATTATTTCCGGGGTATTTTTTATTA
>LSL_0827(pyrR) Score=39.4 Pos=-176 [Lactobacillus salivarius subsp. salivarius UCC118]
AGTCCTTTAAACTAGTCCCGTGAGGCTGAAAAGGTATAATGCTTATTTAAGCTTATAGTGTATATTAATATAAAAATGAAATTAATACGCGGACTAGGACTGATTTGTTCTAGTCCTTTTATTTTTT
# RNA - L13_leader
>LSL_1403(rplM) Score=46.8 Pos=-79 [Lactobacillus salivarius subsp. salivarius UCC118]
TGGTATTGTTTGCCCCACAGTAAGCCCCGTTAATCTTATTGTATGTCAAACATGTA
# RNA - L19_leader
>LSL_0636(rplS) Score=30.2 Pos=-50 [Lactobacillus salivarius subsp. salivarius UCC118]
CGATATTCCGCTGCAACTGGACATGAATGTCGGTG
# RNA - L20_leader
>LSL_0495(infC) Score=56.1 Pos=-154 [Lactobacillus salivarius subsp. salivarius UCC118]
AGAAAAAGCAGAGGCACCCGCTTCTCGCCTAGGAAATGTAGGTTTCCGGGCAGAAATTATGATATTAATTCTAATTAAAACGGATTATTAAGACGGGCATTCTGATTTTTTGGATGTCCGTTTTCTGCATTTTCTCT
# RNA - L21_leader
>LSL_0956(rplU) Score=59 Pos=-95 [Lactobacillus salivarius subsp. salivarius UCC118]
ATCACATCTGCAACCGCACGTTTTAAGTTTAAGTATCTCTTTAGAGGTCACTACATTACGGCGAGTCTAAGTATTTTA
# RNA - Lysine
>LSL_0188(lysP) Score=120.7 Pos=-294 [Lactobacillus salivarius subsp. salivarius UCC118]
CGTCGAACAGAGGTCGCAGTTTTTATCAGTAAATATTTGGAGCTGAAAAAGCAGCAATGAAAATTATTGAAAGGAAAAACTGCCGAAGTAAGATATTGCTTTTTCAATATTTTGCTGGGGCCTGGCTCAACAAGTCAGGAACTGTCGTAGTTTAATAGTTGACTACGGAGCGCTATCGAATGCTT
# RNA - PreQ1
>LSL_1528(iunH) Score=50.2 Pos=-61 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGGACTGGTTCGTAAACTTCCCAGTATAAAAAACCAAGAATCTCA
>LSL_1470(queT) Score=46.9 Pos=-56 [Lactobacillus salivarius subsp. salivarius UCC118]
TTCCACACTGGTTCGTAAACATCCCAGTTAAAAAAACTAGAAAGCA
# RNA - Purine
>LSL_1309(xpt) Score=59.5 Pos=-166 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGTTATCTTTAAATATATACTTATATATCGTCATAATATGGGTGACAGTTTCTACCCAGGACCTTAAATCTTGGACTATAAGTAATTAAGCATAGTAT
# RNA - S15
>LSL_0638(rpsO) Score=14.6 Pos=-75 [Lactobacillus salivarius subsp. salivarius UCC118]
CTTTTTACTGAGTTTGGCGGGTCACCGTCGTCTTATCTCGGATTAAGGCAACTATTATGAAAGGTGGGAAATACATTGGCTATTTCACAAGAAAAGAAAAACGAAATTATGAAGAAGTATGCTCGTCATGAAGG
# TF - Rex: LSL_1214
>LSL_1214(rex) Score=5 Pos=-33 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGTTAAATATTTCACGA
>LSL_1748(adhB2) Score=5.1 Pos=-64 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGAGAAAGAATTCACAA
>LSL_1901(adhE) Score=5.4 Pos=-99 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGTGAATTAATTCACGA
# RNA - T-box(Ala)
>LSL_1111(alaS) Score=64.9 Pos=-242 [Lactobacillus salivarius subsp. salivarius UCC118]
TACTTTGACTTGAATTAGGACATACTGCTAAGTACCTCTATTACAGAGAGAGTTCGGTGCTGGAAGGACTTATAGGTTGGCTTAGACAGTGCTACCTAAATGTTTATAACAAAAGAATATTATTTAATGAAGTGGTTAACGATGACATCGTTGCAAGTAAGGTGGTACCGCGTAGTAATTGCGTCCTTACT
# RNA - T-box(Asp)
>LSL_0852(hisS) Score=76.3 Pos=-243 [Lactobacillus salivarius subsp. salivarius UCC118]
TAAAGCCGAATGAAAGAAGAGTATCTAAACAATCGTTGACAGAGAATGGATGATTGGTGAAAATTCCAGCTATGATTTTTAGAGAAAGACACTTTTTAGGTATATATGTAATGTATATCGTTAGCCGCGTTAACGCTAGAGAGCATAAAATCAAGGTGGTACCGTGCAACTAGCACCCTTGTTGT
# RNA - T-box(Arg)
>LSL_0677(argS) Score=73.2 Pos=-215 [Lactobacillus salivarius subsp. salivarius UCC118]
ACTATTCTATGATAGAAATTAGTAGTTTATGAAAGTTCTAAGCGAGTCCAAGTTGGTGTGAGTTGGATAATGGAAGTAAATGAATCGCGTTTCTTAGAATAACAATTTAATATTTTTTGAGTGGATTACTAATCAAGTAGAGTGGTACCGCGGGAATTTCTCGTCTCTTGCAT
# RNA - T-box(Gly)
>LSL_0912(glyQ) Score=55.5 Pos=-259 [Lactobacillus salivarius subsp. salivarius UCC118]
AAAGTAAACATTGATGAAAAAGGGACTATTCATAAGGATAGGTACAGCGAGTCTGGATAGTGTAAGCAGATGCTATCCTGAATAGTTTGGCGTTTTCGGAGTTTATACGAATTAAGTTGCTAGTTTAACTAGAAGTAGGGTGGAACCGCGATGATGAAAGATCGTCCCTATG
# RNA - T-box(Ile)
>LSL_1636(brnQ) Score=97.8 Pos=-378 [Lactobacillus salivarius subsp. salivarius UCC118]
AAAGAACGCAATGAGAAAGAAGAGTAATTTGTTTGCCCTTTAAGCGAGCTTCGTTTGGTGAGAGGAAGTAAGACAGTAAGCAGATGAAAATCACTTTCGAGTGTTGTACCGAAATCTTAGTGAGAGTAAGGTGCATTGGGAACACCCATTACAGTGTTAGCGTATCGCCTAGACGTAGGCTGTACGTGAAAGGTAGCTGCAGCGATGTAGCTATAAATGCAGGGTGGTACCACGCGATAGGCGTCCTTGAA
>LSL_1042(ileS) Score=77.3 Pos=-274 [Lactobacillus salivarius subsp. salivarius UCC118]
TAATTTATTTCTGAAAGAACGCGAAAATCATATTATATAGGCAGCGAGTCGATGGTCGGTGAAAGTTCGATATATCCCTGATATGATTTTTATCATCTTTCAAATACTTTCCTGAAATAATAGTAGGGTAAGTCGTTTCATCGCGTTAATGATGACTAAAGAAACTACTAATTAATGATAGTTAAAATTTGGGTGGTACCACGGAAATCTCGTCCCTTGC
# RNA - T-box(Leu)
>LSL_0442(leuS) Score=123.8 Pos=-279 [Lactobacillus salivarius subsp. salivarius UCC118]
TATGAACGTAGATAAGGAATAGTAGAGTCTGTATTTTAATTTAAGAGAGTGCATGGTTGGTGTGAATGTACTAAATAGAGATTTGAACTCGCCTTAGATGTTTCTTCATTGAAATTAGTAGGTGAAGACGGTACTTTCCGTTAGAAAAGAAGAGAGCTAATCATTTGATTGGAATATAGGTGGTACCGCGAGTTTTTCGTCCTATACGG
# RNA - T-box(Met)
>LSL_0129(metE2) Score=73.8 Pos=-319 [Lactobacillus salivarius subsp. salivarius UCC118]
AAATAGCTAAGAAAAGATGAGTAATTAATGTGAGTATCACTAAAGAGAGTCGTGAATGGTGAGATGCGATGTGTTGAAAGCTTAATGAAGATGGTCTTGGAGCTAGATTATCTGTGAGCCATGGCAAGCAGATAACAGGGGTCGCCTGTTATAGCGAACGAGTATAGCTTGTACAGTGTACTTAGTGAGGATATTACTGTGAGGTAGTATCGAATAATGGGTGGTAACACGTGAATTAGATGATAACACGTCCCTAGAAT
# RNA - T-box(Phe)
>LSL_0813(pheS) Score=107 Pos=-280 [Lactobacillus salivarius subsp. salivarius UCC118]
TAAAGATGTAGATGGAAAAGAGTAAGATAAAGTAATATTTTAAGAGAGAAATTAGTTTTGGTGAGATAATTTCAATATTTTTTATCTGAAGTTCACTTCCGGAATCGCTATCGGAATACGATTTAAGTTGAAAGATAGAACGTTGATGCTACGTTAAAGGCATATTAGAGTGTTGTTGTACAATTTTGTATAACAAAACAAGGGTGGTACCGCGAGCCTCGTCCCTTTTGG
# RNA - T-box(Ser)
>LSL_0189(serS) Score=63.1 Pos=-250 [Lactobacillus salivarius subsp. salivarius UCC118]
AAACATCGGAGTTCGCCATAAGTAGGCAGTAAAGAGACGTAGTGGTTGGTGAAAACTATGAGCCGAAAATCCAGCGTTCGTTGTATGGGCAGGTAATGCTGCACGGGAGATCGTTAAATCATTGAGTGTGATGGTTATTTACTGTCGAACTTGGGTGGTACCGCGTAAGAAGAAGTCCTTTCGTCCCAATTTT
# RNA - T-box(Thr)
>LSL_0494(thrS) Score=50.8 Pos=-263 [Lactobacillus salivarius subsp. salivarius UCC118]
TGTAGATTTTGTGAAAGACAAACGGATTACTATGATTCAGGGATGAAAGGCTTGACTGAAAACTTTCAATAATGTAGTATTCTTACCACTTTCATGTATTGTTTAATGAAAAGTTAGACCGGTGCGACCGTTAACAGCACAATGAGTAGTTTGTTTAAAGCTAAAAATTAAAGGTGGAACCACGTTAATAGCGTCCTTAATAC
# RNA - T-box(Trp)
>LSL_0218(trpS) Score=65.5 Pos=-206 [Lactobacillus salivarius subsp. salivarius UCC118]
AATCTTCGTTGAACAAGTAAAGTAGACGAGCAATGACAGAGAGCTTAGGTAGTTGAAAATAAGCAAGTAAATCGAAGTGGAGCTTGGGAGAAGAAAATAAATTTGATATTTAATTAAGTGGCATTTTATGCAAATTAGGTGGTACCACGGCTTTGTTCGTCCTATTCAT
# RNA - T-box(Tyr)
>LSL_0931(tyrT) Score=78.1 Pos=-305 [Lactobacillus salivarius subsp. salivarius UCC118]
TAATTCTAATGGAACCCAGTAGTTAGATACTCCCTGGCTAAGAGAGTTAACGGTAGCTGCAAGTTAAACCATAGTATTCTAATGAATTACAACCATCAAAATTAGAATTGCGTTTGCTTACGATACAGCGATTGAGGTGCAAGTTATTGCATAAATACTGGGTGGTACCACGAGAATTTCGTCCCACGGCT
>LSL_1366(tyrS) Score=107.3 Pos=-242 [Lactobacillus salivarius subsp. salivarius UCC118]
TATTAAAGCGATGAAGTAGATTAGTAGATTTGATAGTCAATTTTTAAGAGACTTGGTGGTGCTGCGAATCAAGATAAACTATCAATCGAATTACACTATGGAGCTTGTCCGGGTCATTCCGATAAAGATGACAGAGCGGCTTTTTAAGCAATCTGGGTGGTAACGCGGAAATAATTTTTCGTCCCTAAT
>LSL_0855(tyrT) Score=58.2 Pos=-317 [Lactobacillus salivarius subsp. salivarius UCC118]
TCTTATTAATGATTTAATTAGACTTTAATCTGGGTGTCAGAAAGCTAATGGGTGATGCGAATTAGTCAGGATTAAATGTTCGAAATACATATAAGTTCGGCTAGTAGGACCGTTATTGCCTACATGGAGTGGAACTTTAATAGTTCAATGTGGGTGGTACCACGGTTATTTAGATCGTCCCAGTTAT
# RNA - T-box(Val)
>LSL_1072(valS) Score=106 Pos=-263 [Lactobacillus salivarius subsp. salivarius UCC118]
CATATAAGCAATGAACAAGAGGATTAAAAGAAGCTTGGATTAGAGAGGAATCGTCTGGTGAAAGATTTTCGATAGCTATTTTAATTGTAGCTTGTGAGCTGTTATCTTGAATAAAGTAGGGATAACCGGATTTCGATTCGTTAACAAGGATTTAAGTGGAGTTAAAAACTCAATTTAGGTGGTACCACGGCATTGTCGTCCTATTA
# TF - GlnR: LSL_0557
>LSL_0235(nrgA) Score=5.4 Pos=-94 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGTCATAAAAAGTTACAT
>LSL_0235(nrgA) Score=5.4 Pos=-41 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGTTATAATTTTTGACAT
>LSL_1446(gluQ) Score=5.4 Pos=-201 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGTTAGATTTTCTAACAA
>LSL_0557(glnR) Score=5.4 Pos=-83 [Lactobacillus salivarius subsp. salivarius UCC118]
GTGTAAGAAAATATTACAT
>LSL_1446(gluQ) Score=4.8 Pos=-161 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGTAACCTAATATAACAT
>LSL_0062(glnP) Score=4.6 Pos=-44 [Lactobacillus salivarius subsp. salivarius UCC118]
ATGAGATATATTTTAACAT
>LSL_0581(glnP) Score=4.4 Pos=-157 [Lactobacillus salivarius subsp. salivarius UCC118]
TTGTCACTTTATATAACAT
# TF - CopR: LSL_1318
>LSL_1706(copA2) Score=5.4 Pos=-35 [Lactobacillus salivarius subsp. salivarius UCC118]
GTGATTACAAATGTAAATTA
# TF - ScrR: LSL_0064
>LSL_0065(scrB) Score=5.9 Pos=-81 [Lactobacillus salivarius subsp. salivarius UCC118]
TATGTTATACGATTGACAGT
>LSL_0066(scrA) Score=6.2 Pos=-107 [Lactobacillus salivarius subsp. salivarius UCC118]
TGTGATAAACGATTGACATA
# TF - FabT: LSL_0450
>LSL_0450(fabT) Score=6.3 Pos=-49 [Lactobacillus salivarius subsp. salivarius UCC118]
ATTTTGATAATCAAATT
# TF - MalR: LSL_1283
>LSL_1282(malT) Score=6.3 Pos=-117 [Lactobacillus salivarius subsp. salivarius UCC118]
TATCGCAAACGGTTGCAAAA
# TF - CggR: LSL_1167
>LSL_1167(cggR) Score=6.8 Pos=1 [Lactobacillus salivarius subsp. salivarius UCC118]
TGCGCGAGGAAGTAGAGTTGATTGAGTCAATCGTTCC
# TF - PerR: LSL_1367
>LSL_1367(perR) Score=4.8 Pos=-33 [Lactobacillus salivarius subsp. salivarius UCC118]
TTATAAAAGTTATAA
>LSL_1578(ycnB) Score=4.6 Pos=-64 [Lactobacillus salivarius subsp. salivarius UCC118]
TTACAAAAATTCTAA
>LSL_0409(pcl2) Score=5.5 Pos=-38 [Lactobacillus salivarius subsp. salivarius UCC118]
TTATAATTTTTCTAA
>LSL_1684(ybbL) Score=5.5 Pos=-38 [Lactobacillus salivarius subsp. salivarius UCC118]
TTATAATTTTTCTAA
>LSL_0169(cadA) Score=5.5 Pos=-93 [Lactobacillus salivarius subsp. salivarius UCC118]
TTATAATTTTTCTAA
# TF - TreR: LSL_1513
>LSL_1512(treP) Score=4.8 Pos=-158 [Lactobacillus salivarius subsp. salivarius UCC118]
ATAGATGTATATACAATATA
>LSL_1512(treP) Score=6.3 Pos=-68 [Lactobacillus salivarius subsp. salivarius UCC118]
CAACTTGTATATACAAGTGA
>LSL_1513(treR) Score=6.3 Pos=-162 [Lactobacillus salivarius subsp. salivarius UCC118]
TCACTTGTATATACAAGTTG
# TF - MntR: LSL_1481
>LSL_0904(mntH) Score=5.2 Pos=-87 [Lactobacillus salivarius subsp. salivarius UCC118]
AGTTAAGGTAGACCTAAAAA
# TF - ArgR: LSL_0233, LSL_0538
>LSL_0306(argG) Score=3.5 Pos=-47 [Lactobacillus salivarius subsp. salivarius UCC118]
AATGAATAGATTATGAAT
>LSL_1541(artPQ) Score=3.5 Pos=-162 [Lactobacillus salivarius subsp. salivarius UCC118]
GTTACATAAATATATTTT
>LSL_1541(artPQ) Score=4.3 Pos=-82 [Lactobacillus salivarius subsp. salivarius UCC118]
CTTGCATAAATAAACAAT
# TF - GalR: LSL_0380
>LSL_0381(galK) Score=5.8 Pos=-101 [Lactobacillus salivarius subsp. salivarius UCC118]
ATATTTTTAGTAAATTTTA
>LSL_0376(lacLM) Score=5.5 Pos=-86 [Lactobacillus salivarius subsp. salivarius UCC118]
AATATTTTAGTAAAAAGTA
>LSL_0381(galK) Score=5.5 Pos=-79 [Lactobacillus salivarius subsp. salivarius UCC118]
AAAAGTTTACTAAAAAGTA
>LSL_0380(galR) Score=5.9 Pos=-89 [Lactobacillus salivarius subsp. salivarius UCC118]
TAAAATTTACTAAAAATAT
# TF - HrcA: LSL_0576
>LSL_0576(hrcA) Score=6.6 Pos=-41 [Lactobacillus salivarius subsp. salivarius UCC118]
TTAGCACTCTAATGTGTTAAGTGCTAA
>LSL_1212(groS) Score=7 Pos=-61 [Lactobacillus salivarius subsp. salivarius UCC118]
TTAGCACTCAAGAGTTGAGAGTGCTAA
>LSL_1212(groS) Score=6.4 Pos=-135 [Lactobacillus salivarius subsp. salivarius UCC118]
TTAGCACTCTAATGTGTCGAGTGATAA
# TF - Zur: LSL_1450
>LSL_1944(rpsN2) Score=7.3 Pos=-42 [Lactobacillus salivarius subsp. salivarius UCC118]
TAAAAAGTAATGATTACTATTTA
>LSL_1587(znuA) Score=7 Pos=-40 [Lactobacillus salivarius subsp. salivarius UCC118]
TAAAAAGTAATGATTACTATATA
>LSL_1944(rpsN2) Score=5.7 Pos=-63 [Lactobacillus salivarius subsp. salivarius UCC118]
TAAATCGTAATTGATATCATTTA
>LSL_1450(zur) Score=6.6 Pos=-35 [Lactobacillus salivarius subsp. salivarius UCC118]
TAGAAAGTAAAGATTACTATTTA
# TF - NrdR: LSL_0491
>LSL_1332(nrdD) Score=5.5 Pos=-108 [Lactobacillus salivarius subsp. salivarius UCC118]
ATACTATATATAGTGT
>LSL_1332(nrdD) Score=5.9 Pos=-76 [Lactobacillus salivarius subsp. salivarius UCC118]
ACACTATATATTGTAT
>LSL_1230(nrdH) Score=5.5 Pos=-84 [Lactobacillus salivarius subsp. salivarius UCC118]
CCACAATATATGGTGT
>LSL_1230(nrdH) Score=4.9 Pos=-51 [Lactobacillus salivarius subsp. salivarius UCC118]
TCTCTATATATTGTAT
# TF - NigR: LSL_1711
>LSL_1716(nigB) Score=7 Pos=-86 [Lactobacillus salivarius subsp. salivarius UCC118]
AACTTGAAACGTTTAAAGTT
>LSL_1716(nigB) Score=7 Pos=-86 [Lactobacillus salivarius subsp. salivarius UCC118]
AACTTGAAACGTTTAAAGTT
# RNA - THF
>LSL_1584(folT) Score=34.5 Pos=-164 [Lactobacillus salivarius subsp. salivarius UCC118]
CTAAGGGGTAGGAATCCTTGCGTAACGGACTAATGGAACGGAATGTGAACATTAGTAGATTAAGTCCGATATGACTTAGCGTTTGGTTTCCGCATTCACCATC
# TF - GutR: LSL_1893
>LSL_1894(gutF) Score=7.5 Pos=-98 [Lactobacillus salivarius subsp. salivarius UCC118]
TTTTCT--------AGAAAT
# TF - MtlR: LSL_1628
>LSL_1620(mtlA) Score=6.9 Pos=-110 [Lactobacillus salivarius subsp. salivarius UCC118]
TTTGACACTGACAACTGTGCCAAA
# TF - FruR: LSL_0163
>LSL_0163(fruR) Score=5 Pos=-71 [Lactobacillus salivarius subsp. salivarius UCC118]
TGATTTTTTTTGACTATTTA
>LSL_0163(fruR) Score=5.7 Pos=-61 [Lactobacillus salivarius subsp. salivarius UCC118]
TGACTATTTATGATTGAATT
# TF - CtsR: LSL_0195
>LSL_1168(clpP) Score=6.3 Pos=-101 [Lactobacillus salivarius subsp. salivarius UCC118]
TTAAATTTGACCATTATTGACCTT
>LSL_0386(clpE) Score=-1.6 Pos=-57 [Lactobacillus salivarius subsp. salivarius UCC118]
AAGGTCAAAGTTGGTCAAAATAAC
>LSL_0863(clpB) Score=-1 Pos=-75 [Lactobacillus salivarius subsp. salivarius UCC118]
AAGGTCAAACTTAGTCAAAGTTTA
>LSL_0195(ctsR) Score=-1 Pos=-42 [Lactobacillus salivarius subsp. salivarius UCC118]
AAAGTCAATGTAGGTCAAACCTAC
# TF - LexA: LSL_0540
>LSL_0540(lexA) Score=4.6 Pos=-74 [Lactobacillus salivarius subsp. salivarius UCC118]
ACGAACGTTAGTTTGA
>LSL_1797(xerC) Score=4.5 Pos=-25 [Lactobacillus salivarius subsp. salivarius UCC118]
TCAAATGAATGTTCGG
# TF - BirA: LSL_0325
>LSL_0074(bioY) Score=8.2 Pos=-91 [Lactobacillus salivarius subsp. salivarius UCC118]
ATTGTTAAC----------------GTTAACAAT
# TF - Lp_2742: LSL_1617
>LSL_1617(lp_2742) Score=6.8 Pos=-52 [Lactobacillus salivarius subsp. salivarius UCC118]
TTAGTTACATAAGTAATTAA
# TF - YwzG: LSL_0105
>LSL_0105(ywzG) Score=6.9 Pos=-59 [Lactobacillus salivarius subsp. salivarius UCC118]
ATATTATATGATATATAATAT
# TF - RpiR: LSL_1438
>LSL_1439(rpiA) Score=5.6 Pos=-42 [Lactobacillus salivarius subsp. salivarius UCC118]
TGAAAATTAATTTCT
>LSL_1438(rpiR) Score=5.6 Pos=-104 [Lactobacillus salivarius subsp. salivarius UCC118]
AGAAATTAATTTTCA
# TF - MleR: LSL_1314
>LSL_1313(mleS) Score=5.7 Pos=-107 [Lactobacillus salivarius subsp. salivarius UCC118]
TATAAATAATATTAATA
>LSL_1314(mleR) Score=5.7 Pos=-51 [Lactobacillus salivarius subsp. salivarius UCC118]
TATTAATATTATTTATA
# TF - FlpA: LSL_1782
>LSL_1786(cadA) Score=5.6 Pos=-210 [Lactobacillus salivarius subsp. salivarius UCC118]
AACTTGATAGCCATAAATTT
>LSL_1782(flpA) Score=5.6 Pos=-89 [Lactobacillus salivarius subsp. salivarius UCC118]
TTCTTGATGTGCATCAATTT
>LSL_1781(dps) Score=5.5 Pos=-118 [Lactobacillus salivarius subsp. salivarius UCC118]
TTCTTGATGAGCGTCAATTT
>LSL_1784(copZ) Score=5.9 Pos=-129 [Lactobacillus salivarius subsp. salivarius UCC118]
AACTTGATATGCGTCAATTT
>LSL_1786(cadA) Score=5.7 Pos=-88 [Lactobacillus salivarius subsp. salivarius UCC118]
AACTTGATGTCAGTCAATTA
# TF - LBA0573: LSL_0031
>LSL_0031(LBA0573) Score=5.8 Pos=-68 [Lactobacillus salivarius subsp. salivarius UCC118]
TAATCTCTATAGGGACTA
>LSL_0031(LBA0573) Score=4.5 Pos=-31 [Lactobacillus salivarius subsp. salivarius UCC118]
AAGTCTACACAAGGACTA
# RNA - SMK_box_riboswitch
>LSL_0441(metK) Score=67.5 Pos=-84 [Lactobacillus salivarius subsp. salivarius UCC118]
ATAGTTACAATCCATTCCCGAAAGGATTCGTTTTAAACGAAGATGCCTTGTAACCAAATTACTTATAATAATGGGGGAATTAAATTGAC