# TF - NsrR: MED297_17612, MED297_07531
>MED297_07531(nsrR) Score=5.5 Pos=-44 [Reinekea sp. MED297]
AGATGTATATTAAATGCATCT
>MED297_17612(nsrR) Score=4.1 Pos=-193 [Reinekea sp. MED297]
AAATGTAATTTAATTACATAA
# TF - HexR: MED297_14205
>MED297_12237(oxlT) Score=5.1 Pos=-167 [Reinekea sp. MED297]
TTGAAATTTTACTACAA
>MED297_14205(hexR) Score=4.5 Pos=-54 [Reinekea sp. MED297]
TTGTGAATTTCCTACAA
>MED297_14210(glk) Score=4.5 Pos=-419 [Reinekea sp. MED297]
TTGTAGGAAATTCACAA
>MED297_14210(glk) Score=4.1 Pos=-223 [Reinekea sp. MED297]
TTGTAGTAAAGTTACTC
>MED297_12602(gpmM) Score=5.2 Pos=-36 [Reinekea sp. MED297]
TTGTAATTTTCCTACAT
>MED297_17772(gapB) Score=4.8 Pos=-138 [Reinekea sp. MED297]
TGGTAATAAAAATACAA
>MED297_14225(ugpC) Score=5.5 Pos=-122 [Reinekea sp. MED297]
CTGTAATAAAACTACAA
>MED297_10216(pgk) Score=5.4 Pos=-95 [Reinekea sp. MED297]
TTGTAATAAAATTACAT
>MED297_13507(eno) Score=5.2 Pos=-101 [Reinekea sp. MED297]
TTGTAAGAAAACTACAT
>MED297_03767(pflA) Score=5 Pos=-143 [Reinekea sp. MED297]
TTGTAATTTTGTTACAT
>MED297_17617(pykF) Score=4.9 Pos=-346 [Reinekea sp. MED297]
ATGTAATTAAATTACAT
>MED297_08611(adhE) Score=4.9 Pos=-196 [Reinekea sp. MED297]
TTGTAGTTTTCTTACAC
>MED297_14320(gapA) Score=4.4 Pos=-136 [Reinekea sp. MED297]
TTGTAGTTTACTTTCAT
>MED297_14320(gapA) Score=4.7 Pos=-60 [Reinekea sp. MED297]
TTGTAATTTTACTACGT
>MED297_15774(gltA) Score=4.3 Pos=-222 [Reinekea sp. MED297]
TCGTAATATTCCTACGA
>MED297_10936(pckA) Score=4.9 Pos=-478 [Reinekea sp. MED297]
TCGTAATATCACTACAA
>MED297_10936(pckA) Score=4.2 Pos=-223 [Reinekea sp. MED297]
CTGTAGTTTAGTTTCAG
# TF - BirA: MED297_06733
>MED297_08751(bioB) Score=6.8 Pos=-83 [Reinekea sp. MED297]
ATGTAAAGT---------------AATTGACAA
>MED297_08746(COG1040) Score=6.8 Pos=-231 [Reinekea sp. MED297]
TTGTCAATT---------------ACTTTACAT
# TF - NrdR: MED297_09496
>MED297_18987(nrdA) Score=4.9 Pos=-366 [Reinekea sp. MED297]
GCCCTATATGTTGTGT
>MED297_18987(nrdA) Score=4.8 Pos=-397 [Reinekea sp. MED297]
ACACAATATATGGTTT
>MED297_14097(nrdJa) Score=4.8 Pos=-165 [Reinekea sp. MED297]
CCACTACAGGTTGTGT
>MED297_14097(nrdJa) Score=4.5 Pos=-133 [Reinekea sp. MED297]
ACACTACAGGTAGTGC
# TF - SahR: MED297_05504
>MED297_05504(sahR) Score=7 Pos=-61 [Reinekea sp. MED297]
ATATCAAAATATTTTGATAT
>MED297_01810(metH) Score=7 Pos=-87 [Reinekea sp. MED297]
ATATCAAAATATTTTGATAT
# TF - Zur: MED297_11305, MED297_00400
>MED297_11280(znuA) Score=5.6 Pos=-61 [Reinekea sp. MED297]
GTTATGATACATCATATCATTTA
>MED297_11285(znuC) Score=5.4 Pos=-124 [Reinekea sp. MED297]
TAAATGATATGATGTATCATAAC
>MED297_11285(znuC) Score=5.2 Pos=-119 [Reinekea sp. MED297]
GATATGATGTATCATAACAAATA
>MED297_00400(zur2) Score=5.9 Pos=-77 [Reinekea sp. MED297]
TTAATGATATATCATATCATTTA
# TF - PrpR: MED297_14280
>MED297_04744(prpE) Score=4.9 Pos=-93 [Reinekea sp. MED297]
ATTGTTAACAAT
>MED297_14280(prpR) Score=4.9 Pos=-77 [Reinekea sp. MED297]
ATTGTTAACAAT
>MED297_14280(prpR) Score=4.2 Pos=-14 [Reinekea sp. MED297]
ATTGTTAACAAA
>MED297_04744(prpE) Score=4.9 Pos=-31 [Reinekea sp. MED297]
ATTGTTAACAAT
# TF - HutC: MED297_04899
>MED297_04904(hutI) Score=5.4 Pos=-35 [Reinekea sp. MED297]
CAAGTTGTATATACAACTAA
>MED297_04899(hutC) Score=5.2 Pos=-52 [Reinekea sp. MED297]
TTAGTTGTATATACAACTTG
# TF - IscR: MED297_14930
>MED297_14062(ydhD) Score=5.4 Pos=-25 [Reinekea sp. MED297]
ATATCTGAGCGATTTGGTAGGTTAT
>MED297_01820(nfuA) Score=6.2 Pos=-86 [Reinekea sp. MED297]
AAAGCTGACTAAATTACTCAGGTAT
>MED297_14930(iscR) Score=6.3 Pos=-107 [Reinekea sp. MED297]
ATAGTTGACTGTTTTGCTCAGGTAT
>MED297_10476(erpA) Score=6.3 Pos=-63 [Reinekea sp. MED297]
ATAGTTGACTGTTTTGCTCAGGTAT
# TF - NagC: MED297_06339
>MED297_06344(nagE) Score=5.8 Pos=-154 [Reinekea sp. MED297]
ATTTAATTCATTCTGAAAATTAT
>MED297_06339(nagC) Score=5.8 Pos=-121 [Reinekea sp. MED297]
ATAATTTTCAGAATGAATTAAAT
>MED297_19597(nagF) Score=6 Pos=-100 [Reinekea sp. MED297]
ATCTGATTTAAGTCAAAAAAAAT
>MED297_09986(mcp) Score=5.6 Pos=-50 [Reinekea sp. MED297]
ATTTGATTCATAAAAAATAAAAT
>MED297_10246(mcp2) Score=5.4 Pos=-149 [Reinekea sp. MED297]
ATTATTTTTGACTTAAATCAATT
# TF - NagQ: MED297_03120
>MED297_20052 Score=4.9 Pos=-78 [Reinekea sp. MED297]
TGGTTTTGTGGTGGTATC
>MED297_03115(nagK) Score=6.1 Pos=-73 [Reinekea sp. MED297]
TGGTATTAAATTGGTATT
>MED297_05914(MED297_05914) Score=5.9 Pos=-44 [Reinekea sp. MED297]
AGGTATTATATTGGTATT
>MED297_11870(cdxA) Score=5.8 Pos=-51 [Reinekea sp. MED297]
AGGTATTTAATTGGTATT
>MED297_00800(chiA) Score=-2.1 Pos=-144 [Reinekea sp. MED297]
AATGCCAAAGAGATACCA
# TF - NtrC: MED297_03702
>MED297_10311(glnK) Score=4.8 Pos=-332 [Reinekea sp. MED297]
CGCACCTATACGGTGCG
>MED297_10311(glnK) Score=4.3 Pos=-314 [Reinekea sp. MED297]
CGCCCTAAACTGGTGCG
>MED297_12572(glnA) Score=4.9 Pos=-245 [Reinekea sp. MED297]
CGCACCAAAACAGCGCA
>MED297_12572(glnA) Score=4.8 Pos=-232 [Reinekea sp. MED297]
CGCACTTAGTTGGTGCA
>MED297_03707(ntrB) Score=5.3 Pos=-217 [Reinekea sp. MED297]
TGCACTATAATAGTGCT
# TF - TrpR: MED297_18498
>MED297_18498(trpR) Score=4.5 Pos=-19 [Reinekea sp. MED297]
TGTTATAGCATACTAGTACA
# TF - FruR: MED297_11620
>MED297_11620(fruR) Score=4.5 Pos=-63 [Reinekea sp. MED297]
AAGCTGAATGCATTCAGCAA
>MED297_11615(fruB) Score=4.4 Pos=-41 [Reinekea sp. MED297]
CTGCTGAACCGTTTCAGTAT
>MED297_11620(fruR) Score=4.4 Pos=-197 [Reinekea sp. MED297]
ATACTGAAACGGTTCAGCAG
>MED297_11615(fruB) Score=4.5 Pos=-175 [Reinekea sp. MED297]
TTGCTGAATGCATTCAGCTT
# TF - LexA: MED297_16754
>MED297_13572(recA) Score=5 Pos=-31 [Reinekea sp. MED297]
TACTGGTCATTCATACAGCA
>MED297_09676(recN) Score=5.8 Pos=-82 [Reinekea sp. MED297]
AACTGTATATATATACATAT
>MED297_04849(imuA) Score=6.3 Pos=-35 [Reinekea sp. MED297]
TACTGTATATACATACAGTT
>MED297_16639(sulA) Score=5.7 Pos=-30 [Reinekea sp. MED297]
TACTGTTTATTTATACAGGC
>MED297_16754(lexA) Score=5.8 Pos=-28 [Reinekea sp. MED297]
TACTGTATATATTAACAGGC
>MED297_03315(dinB) Score=5.4 Pos=-28 [Reinekea sp. MED297]
AACTGTATAAGCATACAGGT
>MED297_19917(uvrD) Score=5.1 Pos=-27 [Reinekea sp. MED297]
CCCTGTTTTTTTATACAGTT
>MED297_04517(intIA) Score=5.9 Pos=-45 [Reinekea sp. MED297]
TACTGTATAAATATACATAT
>MED297_12852(uvrA) Score=5.7 Pos=-188 [Reinekea sp. MED297]
GACTGTACACATATACAGTA
# TF - LiuR: MED297_07471
>MED297_07476(mmgB) Score=5.2 Pos=-79 [Reinekea sp. MED297]
GTTAACGTAAACGAAAAC
>MED297_07476(mmgB) Score=6.2 Pos=-85 [Reinekea sp. MED297]
GTTGACGTTAACGTAAAC
>MED297_19182(liuA) Score=4.9 Pos=-60 [Reinekea sp. MED297]
GTTTACGTCAACGTCACT
>MED297_19182(liuA) Score=5.7 Pos=-66 [Reinekea sp. MED297]
GTTGACGTTTACGTCAAC
>MED297_07471(liuR) Score=6.2 Pos=-99 [Reinekea sp. MED297]
GTTTACGTTAACGTCAAC
>MED297_07471(liuR) Score=5.2 Pos=-105 [Reinekea sp. MED297]
GTTTTCGTTTACGTTAAC
# TF - PsrA: MED297_15989
>MED297_16324(etfD) Score=5.8 Pos=-157 [Reinekea sp. MED297]
TTTCAAACAGTTGTTTTAAT
>MED297_12452(acdH1) Score=6.3 Pos=-122 [Reinekea sp. MED297]
TTTCAAACGATCGTTTGAAT
>MED297_16784(scp) Score=5.1 Pos=-112 [Reinekea sp. MED297]
TTTTATACGTCTGTTTCAAA
>MED297_16784(scp) Score=6.1 Pos=-99 [Reinekea sp. MED297]
TTTCAAACAATTGTTTGATT
>MED297_16319(etfB) Score=5.9 Pos=-205 [Reinekea sp. MED297]
ATTAAAACAACTGTTTGAAA
>MED297_00330 Score=5.8 Pos=-67 [Reinekea sp. MED297]
ATTCAAACGCGCGTTTAAAT
>MED297_15989(psrA) Score=6.1 Pos=-32 [Reinekea sp. MED297]
TTTAAAACGATCGTTTGAAA
>MED297_17502(fadD) Score=5.7 Pos=-95 [Reinekea sp. MED297]
TATCAAACGACCGTTTTAAT
>MED297_20722 Score=6.2 Pos=-55 [Reinekea sp. MED297]
ATTCAAACGACCGTTTGAAT
>MED297_15730(fadB) Score=6 Pos=-152 [Reinekea sp. MED297]
AATCAAACAATCGTTTGAAA
>MED297_15730(fadB) Score=5.1 Pos=-139 [Reinekea sp. MED297]
TTTGAAACTGGTGTTTGATT
# TF - RutR: MED297_01515
>MED297_21307(ppuA) Score=4.3 Pos=-2 [Reinekea sp. MED297]
TCATGACTGCTCAGACAGAT
>MED297_06818(guaD) Score=4.3 Pos=-156 [Reinekea sp. MED297]
TGTTGACCATGTGGTTAGGA
>MED297_08316(xdhA) Score=5.9 Pos=-147 [Reinekea sp. MED297]
ACCTGACCGCATGGTCAGCT
# TF - FabR2: MED297_12512
>MED297_00660(hyIII) Score=6.2 Pos=-43 [Reinekea sp. MED297]
AATATACACTTGTATATT
>MED297_11585(lcfH) Score=6.2 Pos=-37 [Reinekea sp. MED297]
AATATACATCTGTATATT
# RNA - TPP
>MED297_13137(thiB) Score=66.3 Pos=-128 [Reinekea sp. MED297]
CGTTCTTGCCGGGGTGCTGCCGTATTGCAGCTGAGAAAAACCCGTTGAACCTGAACCAGTTCGTACTGGCGTAGGGAGCAAAGCCCTCTTTGTGTT
>MED297_07781(thiC) Score=70.1 Pos=-204 [Reinekea sp. MED297]
ATTCATCTTGTCGGAGTGCCAACGGTCATCGACCCACGGCTGAGATCGCAATTGCGAAATCCGCAGAACCTGATCCGGTTAATACTGGCGTAGGAATCAAGATTCTGCTCAGC
# RNA - FMN
>MED297_12482(emrE) Score=25.1 Pos=-323 [Reinekea sp. MED297]
GTTGTTTTTGTCAGGAGCCCACGAGCGCCCGAGTCGCCATTCTGGTGGCCCGGGGTCTAGCAGATCAGGTGCGCAAGACAGGCAATCTAAGGATTGGTTGATCGTGCAAGGCCTGAGCCGACGGTGATAGTCCGGATGGAAGAAGTTAACGCA
# TF - SoxR: MED297_19447
>MED297_19452(PF00903) Score=6.7 Pos=-61 [Reinekea sp. MED297]
ACCTCAACTTTAGTTGAGGT
# TF - ZntR: MED297_20437
>MED297_07836(zntA) Score=4.8 Pos=-18 [Reinekea sp. MED297]
ACTCTATAGTAAGCTCGAATGT
# RNA - MOCO_RNA_motif
>MED297_14620(moaA) Score=77.5 Pos=-120 [Reinekea sp. MED297]
ATTAAGCAATACACCGAGTGACAGGGCGCTAAGTGGTCTCCATAAGCCCTTGTCACCTCGCAGTAGCGACAGGGTAGCGATTGGAAACGGCGTTGCCTCCCGTGTTTGGAAAGGTGAATAATGTTACAGGATTC
# TF - MetR: MED297_11750
>MED297_11745(metE) Score=5 Pos=-102 [Reinekea sp. MED297]
ATGAATTTTACTCAT
>MED297_11745(metE) Score=4.6 Pos=-81 [Reinekea sp. MED297]
ATGAATTAATACCAT
>MED297_11750(metR) Score=4.6 Pos=-84 [Reinekea sp. MED297]
ATGGTATTAATTCAT
>MED297_11750(metR) Score=5 Pos=-63 [Reinekea sp. MED297]
ATGAGTAAAATTCAT
# TF - YjiR: MED297_00535
>MED297_00530 Score=16.5 Pos=-142 [Reinekea sp. MED297]
TACAGTT-(28)-TACAGAT-(2)-ATCTGTA-(24)-ATCTGTA