# TF - FabR: AHA_0367
>AHA_3493(hyIII) Score=5.5 Pos=-64 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGCTAACACTTGTACTCT
>AHA_2280(fabA) Score=6.1 Pos=-57 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGCGAACAACTGTACGCT
>AHA_0722(lcfH) Score=5.8 Pos=-98 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGCGAACACTTGTAAGCT
>AHA_0722(lcfH) Score=4.5 Pos=-33 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGCGTACAACTGTTACTT
>AHA_2144(fadL) Score=4.3 Pos=-192 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGCGTACACCTGTAGTAA
>AHA_2144(fadL) Score=5 Pos=-179 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGTAAACAACTGTACGCT
>AHA_3740(plsC) Score=5.1 Pos=-65 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGCGAACGCTTGTTCGCT
>AHA_0367(fabR) Score=5.4 Pos=-131 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGCGAACAGCTGTGCGCC
>AHA_0366(OLE1) Score=5.4 Pos=-35 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGCGCACAGCTGTTCGCT
# TF - HexR: AHA_1350
>AHA_0821(eno) Score=4.4 Pos=-34 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTTGTTTTTTTACGA
>AHA_0891(ackA) Score=4.7 Pos=-219 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTTATTTTTCAACAA
>AHA_0591(ppc) Score=4.6 Pos=-205 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATGTAAGTAAGTTACAT
>AHA_1350(hexR) Score=4.6 Pos=-209 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTTGCTTTGCAACAT
>AHA_1350(hexR) Score=4.8 Pos=-26 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CTGAAGCTAAATTACAA
>AHA_1349(pykA) Score=5.4 Pos=-111 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTAATTTAGTAACAA
>AHA_1351(glk) Score=4.8 Pos=-331 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTAATTTAGCTTCAG
>AHA_1351(glk) Score=4.6 Pos=-148 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATGTTGCAAAGCAACAA
>AHA_1650(glpT) Score=4.9 Pos=-151 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTAATAAAACTGCAA
>AHA_1942(focA) Score=5.2 Pos=-106 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTAGTAAAATTACAT
>AHA_1689(pflA) Score=4.4 Pos=-42 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATGTAATAAAATAACGG
>AHA_2703(gltB) Score=4.4 Pos=-310 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGGTAAAATTACTACAA
>AHA_2816(aceB) Score=4.8 Pos=-314 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTAATTTTATTACGT
>AHA_3140(tal) Score=4.4 Pos=-375 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACGTAATAAAATTTCAA
>AHA_3140(tal) Score=4.8 Pos=-85 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTAATTTTATTTCAG
>AHA_3143(grcA) Score=4.6 Pos=-289 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATGTAGTTAAATTACTA
>AHA_4080(pntA) Score=5 Pos=-195 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTAATAAAACTCCAA
>AHA_4100(mglB) Score=4.7 Pos=-149 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTTGCTATGTAACAG
>AHA_4145(ldhA) Score=5.3 Pos=-39 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTAATTTAACTACAT
>AHA_3618(gapA) Score=4.3 Pos=-58 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTCTAGTAAATTTACAA
>AHA_3039(ptsH) Score=4.3 Pos=-97 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TCGTTACTTTACAACAT
# TF - BirA: AHA_4040
>AHA_1488(bioA) Score=7.2 Pos=145 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
cTGTcAACa----------------aaTTgACAA
>AHA_1489(bioB) Score=7.2 Pos=-180 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTCAATT----------------TGTTGACAG
# TF - NrtR: AHA_4210
>AHA_4211(pncA) Score=5.9 Pos=-44 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGGTAGATAATATCACACGA
>AHA_4210(nrtR) Score=5.9 Pos=-52 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TCGTGTGATATTATCTACCAA
# TF - NrdR: AHA_3334
>AHA_0870(nrdJa) Score=5.1 Pos=-96 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATACTACATATAGTGT
>AHA_1231(nrdD) Score=4.1 Pos=-202 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACACCACATATAGGGC
>AHA_1231(nrdD) Score=5.3 Pos=-171 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TCCCTATATGTTGTGT
>AHA_2333(nrdA) Score=5.4 Pos=-79 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACACTATATCTTGTGA
>AHA_2333(nrdA) Score=4.2 Pos=-110 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CCTCACTATCTTGTAG
# TF - Zur: AHA_3674
>AHA_1911(rpmE) Score=5.9 Pos=-41 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TATTTGTTATGTTATAACAACTA
>AHA_3729(znuC) Score=6.7 Pos=-74 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGTGTGTGATAATATAACAAACC
>AHA_3728(znuA) Score=6.3 Pos=-70 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGAGAGTTATAATATAACAATAA
# TF - PdhR: AHA_3864
>AHA_3864(pdhR) Score=6.3 Pos=-31 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTGGTAATACCAAT
>AHA_3864(pdhR) Score=5.7 Pos=-170 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTGGTCTGACCAAT
# TF - FadR: AHA_2443
>AHA_1573(fadE) Score=5.8 Pos=-70 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AACAGGTCAGACCTCTG
>AHA_2153(fadI) Score=5.3 Pos=-50 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATGAGGTCAGACCTCTC
>AHA_2145(fadL) Score=4.8 Pos=-148 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CACTGGTCTGATTTCTT
# TF - NorR: AHA_0118
>AHA_0119(norV) Score=5.6 Pos=-122 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGTTGTCTAAATGACAATG
>AHA_0118(norR) Score=5.6 Pos=-67 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CATTGTCATTTAGACAACC
>AHA_0118(norR) Score=4.6 Pos=-42 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TATAGTCAAAAACACAAAC
>AHA_0118(norR) Score=5.3 Pos=-22 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CACTGTCATTTGGACAATC
>AHA_0119(norV) Score=5.2 Pos=-167 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GATTGTCCAAATGACAGTG
>AHA_0119(norV) Score=4.6 Pos=-147 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTTTGTGTTTTTGACTATA
# TF - HutC: AHA_0376
>AHA_0377(hutI) Score=4.9 Pos=-90 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTAATTGTATATACAAACTC
# TF - HypR: AHA_0564
>AHA_0776(putA) Score=4.9 Pos=-78 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTGTATACATT
>AHA_0564(hypR) Score=4.4 Pos=-47 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACTTTATACAAT
>AHA_0776(putA) Score=5.2 Pos=-205 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTGTATACAAA
# TF - IscR: AHA_1746
>AHA_1746(iscR) Score=7.5 Pos=-70 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATACTTGACTGATTTAGTCGGGTAT
>AHA_3517(erpA) Score=6.6 Pos=-24 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATACTTGAACTGAATGGTCGGGTAT
# TF - NagC: AHA_1524
>AHA_1526(nagB) Score=5.8 Pos=-86 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTTATTTACGCTATAAAACAA
>AHA_3039(ptsH) Score=6.1 Pos=-228 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTATTTTTCGTTATAAAATAA
>AHA_1527(nagE) Score=5.8 Pos=-208 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTTTTATAGCGTAAATAAA
# TF - NtrC: AHA_0274
>AHA_0277(glnA) Score=4.3 Pos=-163 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGCACTACTTTGAGGCG
>AHA_0277(glnA) Score=5.5 Pos=-197 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CGCACCATTTTAGTGCA
>AHA_3695(amtB2) Score=5.1 Pos=-247 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGCGCCAATCTGGTGCG
>AHA_0649(glnK2) Score=4.9 Pos=-194 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGCTCTTGTTTGGTGCA
>AHA_0275(ntrB) Score=5.7 Pos=-52 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGCACCACATTGGTGCA
# TF - Fur: AHA_1530
>AHA_4252(PE36_02307) Score=5.4 Pos=-59 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CAATGAGAATAGTTATCATTG
>AHA_2544 Score=5.5 Pos=-80 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AATTGATAACTCTTTTCATTA
>AHA_2481 Score=5.1 Pos=-71 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAATGCACACCATTCTCATTT
>AHA_3578(COG3205) Score=6.1 Pos=-70 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGATGAGAATAGTTTTCATTT
>AHA_0966(hutB) Score=5 Pos=-92 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AATTGATAATCGCTTTCATTC
>AHA_0967(hutX) Score=5 Pos=-97 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GAATGAAAGCGATTATCAATT
>AHA_4275 Score=5.3 Pos=-134 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGATGCAAATGATTAGCAATT
>AHA_2479 Score=6 Pos=-44 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AACTGATAATCATTATCATTT
>AHA_0709(mntH) Score=6.3 Pos=-46 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AATTGATAATAATTATCATTT
>AHA_2992 Score=6.3 Pos=-60 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AATTGATAATAATTTTCATTT
>AHA_0514 Score=6.2 Pos=-90 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAATAATAATTATTATCATTT
>AHA_0461 Score=5.8 Pos=-112 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAATGAAAATCAATATCATTA
>AHA_1970(AHA_1970) Score=5.7 Pos=109 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAATAAAAATGATTACCATTT
>AHA_1663(hutR) Score=5.9 Pos=-88 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAATGATAATGATTATCAATC
>AHA_1663(hutR) Score=5.8 Pos=-20 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAATAATAATTATTCTCAATA
>AHA_0972(hutR) Score=4.7 Pos=-90 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAATGAGAATGATTCCGTTTA
>AHA_0972(hutR) Score=4.8 Pos=-31 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTTTGATAACAGTTCTCAATA
>AHA_1965 Score=5.8 Pos=-84 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAATGATAAGAATTGTCATTT
>AHA_1964 Score=5.8 Pos=-93 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAATGACAATTCTTATCATTT
>AHA_1982 Score=5.3 Pos=-42 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TATTGATAGTGGTTATCATTT
>AHA_2744(feoA) Score=5 Pos=-38 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAAAGAGAATTATTATTGTTT
>AHA_1987(tonB1) Score=4.6 Pos=-123 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GATTGATAATGGTTGTTGTTT
>AHA_3963 Score=6 Pos=-189 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAATGAGATTAATTATCATTT
>AHA_1953 Score=4.9 Pos=-43 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAATGAGATTTGTTACTATTC
>AHA_0469(hemC) Score=4.8 Pos=-105 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAATAAAAATCATTTTCAGCG
>AHA_0971(Ping_1736) Score=4.8 Pos=-178 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TATTGAGAACTGTTATCAAAC
>AHA_0971(Ping_1736) Score=4.7 Pos=-119 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAAACGGAATCATTCTCATTT
# TF - TyrR: AHA_1886
>AHA_1654(aroF) Score=4.8 Pos=-59 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTGTAAATAAAAATGAACGG
>AHA_1654(aroF) Score=4.5 Pos=-238 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GCGTAATCATATGTTTACGT
>AHA_1980(aroG) Score=5.7 Pos=-82 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATGTAATTTTCTATTTACAC
>AHA_1883(phhA) Score=5.4 Pos=-146 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGTCACAAATTATTTACAA
>AHA_2663(hpd) Score=5.3 Pos=-180 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATGTCACAATCTATTTACAT
>AHA_2663(hpd) Score=4.4 Pos=-91 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATGAAACAAGTTGTTAACAA
# TF - FruR: AHA_2349
>AHA_2349(fruR) Score=5.3 Pos=-156 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GCTGAATCGTTTCACT
>AHA_2349(fruR) Score=5.2 Pos=-131 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACTGAATCGTTTCAGC
>AHA_2348(fruB) Score=5.5 Pos=-193 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GCTGAAACGATTCAGT
>AHA_2348(fruB) Score=4.8 Pos=-168 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGTGAAACGATTCAGC
# TF - RbsR: AHA_2314
>AHA_2309(rbsD) Score=5.4 Pos=-72 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGACGCAACCGGTTGCGTAA
# TF - ArgR: AHA_0654
>AHA_0655(artP) Score=4 Pos=-131 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTTGCATTCATATGCCTA
>AHA_0655(artP) Score=4.3 Pos=-89 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TCTGCATATTGATTCAAA
>AHA_0655(artP) Score=4 Pos=-26 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTTGAAAACTTATTCAAT
>AHA_0592(argE) Score=4.3 Pos=-52 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTTGCATTTGTATTTTCT
>AHA_0592(argE) Score=3.9 Pos=-73 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACAGAATATTCATGCACT
>AHA_2569(argA) Score=4.6 Pos=-58 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGTGCATTTATTTTCATA
>AHA_2569(argA) Score=3.5 Pos=-79 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AATCAATATTTAATCTTG
>AHA_0593(argC) Score=3.9 Pos=-234 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGAAAATACAAATGCAAA
>AHA_0593(argC) Score=4.3 Pos=-213 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGTGCATGAATATTCTGT
>AHA_3376(proV) Score=3.8 Pos=-137 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AATTAATTATGATTTTCT
>AHA_3376(proV) Score=4.7 Pos=-226 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTGAATTTGTTTGCATT
>AHA_0654(argR) Score=3.8 Pos=-88 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAGGCATATGAATGCAAA
>AHA_0654(argR) Score=4.5 Pos=-130 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTTGAATCAATATGCAGA
>AHA_0654(argR) Score=4.7 Pos=-193 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTGAATAAGTTTTCAAA
>AHA_2724(carA) Score=4.8 Pos=-174 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTGAATTTAGATGCATT
# TF - AgaR: AHA_0813
>AHA_0812(agaZ) Score=5.6 Pos=-134 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CTTTCGATTCATTTC
>AHA_0812(agaZ) Score=4.9 Pos=-88 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CTTTTATTTCGTTTC
>AHA_0813(agaR) Score=0.1 Pos=-50 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTAACGAAGTGAAAG
>AHA_0812(agaZ) Score=4.7 Pos=-237 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CTTTCACTTCGTTAC
>AHA_0813(agaR) Score=-0.2 Pos=-199 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GAAACGAAATAAAAG
>AHA_0813(agaR) Score=-0.7 Pos=-153 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GAAATGAATCGAAAG
# TF - LexA: AHA_0183
>AHA_2107(polB) Score=4.8 Pos=-52 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CACTGTATGAACGTACAATA
>AHA_0284(recG) Score=5 Pos=-35 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATCTGGACATATTTACAGTG
>AHA_2277(yebG) Score=4.7 Pos=-53 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACTGTATATCCATACATAT
>AHA_3955(uvrA) Score=5.2 Pos=-72 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACCTGTCTATTCATCCAGTA
>AHA_0220(uvrD) Score=5.4 Pos=-26 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GCCTGTATAAATAAACAGGA
>AHA_1145(dinB) Score=4.9 Pos=-22 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACCTGTTTATTCGTACAGTG
>AHA_4047(topB) Score=5.8 Pos=-34 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACTGTTCACATATACAGTA
>AHA_3648(ruvA) Score=5.1 Pos=-74 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGCTGGATACTTATCCAGTT
>AHA_0183(lexA) Score=5.3 Pos=-29 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGCTGTATAAAAAGACAGGT
>AHA_0183(lexA) Score=5.3 Pos=-49 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CACTGTATATACTGCCAGTG
>AHA_3716(recA) Score=5.9 Pos=-68 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACTGTATGAATAGACAGTA
>AHA_2986(recN) Score=5.8 Pos=-45 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACTGGATACATACACAGTA
>AHA_2986(recN) Score=5.6 Pos=-67 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACTGTATGGAAAACCAGTA
# TF - LiuR: AHA_2073, AHA_2141
>AHA_2079(ivdB) Score=6.2 Pos=-159 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTTTACGTTAGCGTAAAC
>AHA_2079(ivdB) Score=4.8 Pos=-153 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTTAGCGTAAACGTAAAT
>AHA_2078(liuA) Score=4.8 Pos=-111 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTTACGTTTACGCTAAC
>AHA_2078(liuA) Score=6.2 Pos=-105 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTTTACGCTAACGTAAAC
>AHA_2141(liuR2) Score=5 Pos=-17 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTTGACGTTTGGGTAAGG
>AHA_1975(etfD) Score=6.3 Pos=-58 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CTTTACGTTTACGTAAAC
>AHA_1976(etfB) Score=6.3 Pos=-75 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTTTACGTAAACGTAAAG
>AHA_2143(ivdA) Score=5 Pos=-89 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CCTTACCCAAACGTCAAC
>AHA_2265(prpB) Score=5.8 Pos=-60 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTGACGTTAACGTAAAC
>AHA_2265(prpB) Score=4.6 Pos=-54 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTTAACGTAAACGTGATA
# TF - PsrA: AHA_1345
>AHA_0139(fadB) Score=5.1 Pos=-123 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGTTAAACGAATGTTTTAAA
>AHA_0139(fadB) Score=4.8 Pos=-110 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTTTAAATAGGTGTTGAAAT
>AHA_1345(psrA) Score=5.4 Pos=-30 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTTTAAACATTCGTTTAAGT
>AHA_2153(fadI) Score=4.8 Pos=-100 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTTCAATCAGCCGTATGAAA
>AHA_3357(fadH) Score=5 Pos=-182 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTCCAAACATTTGTTTGAAA
# TF - PhnR: AHA_1937
>AHA_1937(phnR) Score=6 Pos=-18 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CTTTTGGTATATACCAGAAT
>AHA_1936(phnS) Score=5.6 Pos=-39 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AATCTGGTTTATACCAAGCC
>AHA_1935(phnT) Score=6.1 Pos=-36 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAACTGGTATATACCAAATC
>AHA_1938(phnW) Score=4.2 Pos=-166 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACGTTGGTAGATACCAGTAT
>AHA_1938(phnW) Score=6.4 Pos=-30 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTCTGGTATATACCAAAAG
# TF - NarP: AHA_1581
>AHA_1584(napF) Score=4.2 Pos=-125 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TATCTCCCTGGTGGTA
>AHA_1917(dcuC) Score=5 Pos=-121 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCCCTTATTGGATA
>AHA_4118(nirB) Score=4.4 Pos=-115 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCTATTTATGTATA
>AHA_4118(nirB) Score=4.7 Pos=-80 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCCCTGAGGGGATA
>AHA_1942(focA) Score=4.7 Pos=-285 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCTCTTAGGGGGTT
>AHA_4048(torY) Score=4.8 Pos=-56 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCTCTCAATGGATA
>AHA_3208(frdA) Score=4.3 Pos=-19 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TATCCCTAAGGAGGCA
>AHA_2464(nrfA) Score=4.5 Pos=-160 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCCATTTGGTAATA
>AHA_1136(nqrA) Score=4.8 Pos=-297 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCTATTTTTGGGTA
>AHA_0431(nhaP) Score=4.4 Pos=-100 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACTCATAAATAGGTA
>AHA_3953(ompW) Score=4.3 Pos=-107 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TATCTATTTCTTGGTA
>AHA_0251(napF2) Score=4.6 Pos=-28 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAACCCCTAATAGGTA
>AHA_0565(pckA) Score=4.7 Pos=-66 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCACCTAAGTGATA
>AHA_1485(dcuB) Score=4.7 Pos=-90 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAACCCTTTAGGGCTA
>AHA_3208(frdA) Score=4 Pos=-315 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAATTCTTATTAAATA
>AHA_4048(torY) Score=4.4 Pos=-42 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACTACTATATTGGTA
>AHA_2526(hybO) Score=4.9 Pos=-205 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCCCCTAGTGGGTA
>AHA_3864(pdhR) Score=4.8 Pos=-124 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCCCTTAAGTGGCA
>AHA_1463(adhB) Score=4.8 Pos=-33 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TACCACTTAATGGCTA
# TF - Tola_2750: AHA_3592
>AHA_3591(PF01810) Score=7.4 Pos=-761 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CATTGTATCGATACAATG
>AHA_3592(AHA_3592) Score=8 Pos=767 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TATTGTCACATGACAATT
>AHA_3592(AHA_3592) Score=7.4 Pos=682 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CATTGTATCGATACAATG
>AHA_3591(PF01810) Score=8 Pos=-847 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AATTGTCATGTGACAATA
# RNA - TPP
>AHA_0876(thiB) Score=64.1 Pos=-143 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CGTTTCTCAAACGGGGTGCGGTTTACCGCTGAGATTATACCCGTGAACCTGATCCAGATAATGCTGGCGGAGGAATTTGAGGCATGGCGCTC
>AHA_0439(thiC) Score=65.1 Pos=-396 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CCATCTTGTCGGAGTGCTGACCGTCGAACGACGCTAAGCTGAGACCGTTAATTCGGGATCCGTGGAACCTGATCAGGTTAAGACCTGCGAAGGGAAACAAGGGTAACTTGCGGGT
# RNA - FMN
>AHA_1311(ribB) Score=110.2 Pos=-259 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CTTATTCTCAGGGCGGGGTGAAATTCCCCACCGGCGGTATCCCGATGTGACTCGGGGAGCCCGCGAGCGCCCGACCCGGTATTGCACCGGGACGGGGTCAGCAGATCCGGTGAGATGCCGGAGCCGACGGTCATAGTCCGGATGAAAGAGGATAAGACA
# TF - GntR: AHA_0290
>AHA_0287(gntK) Score=6.2 Pos=-89 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGTTGTTACCGGTAACATGT
>AHA_0287(gntK) Score=6.4 Pos=-75 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACATGTTACCGGTAACGTGC
>AHA_0290(gntR) Score=5.8 Pos=-35 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAATGTTACGTGTAACATTT
>AHA_0286(gntT) Score=6.4 Pos=-190 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GCACGTTACCGGTAACATGT
>AHA_0286(gntT) Score=6.2 Pos=-176 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACATGTTACCGGTAACAACA
# TF - SoxR: AHA_2710
>AHA_2711 Score=5.3 Pos=-61 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACCTCAAGTTAGCTTTAACT
# TF - ZntR: AHA_0842
>AHA_0629(zntA) Score=6.3 Pos=-3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACCTTGGACTTAACACCAAGGT
# TF - CueR: AHA_4221
>AHA_4222(copA) Score=3.8 Pos=-70 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CCCTTACAGTAAAGGTTAGGG
# TF - EbgR: AHA_0204
>AHA_0204(ebgR) Score=4.9 Pos=-89 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTTTCTTTTAGTAAAAATGCT
>AHA_0205(ebgA) Score=4.9 Pos=-326 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GCTGATTTTAGTAAAATAATC
>AHA_0205(ebgA) Score=4.8 Pos=-65 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CTGATATTTAGTAAATGTTTA
# TF - ScrR: AHA_2977
>AHA_2980(scrK) Score=6.6 Pos=-66 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TGGCTAAAACGGTTTAGCTG
>AHA_2981(scrY) Score=6.5 Pos=-108 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CAGCTGAAACGGTTTAGCTG
>AHA_2981(scrY) Score=6.2 Pos=-77 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAGCTAAATTGGTTTAGCTA
# TF - SgaR: AHA_0174
>AHA_0173(sgaA) Score=6.5 Pos=-127 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAATGATAGCGCTATCACAG
>AHA_0173(sgaA) Score=4.8 Pos=-92 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATCTGGTAGCGCTAACTTTC
>AHA_0174(sgaR) Score=4.8 Pos=-180 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GAAAGTTAGCGCTACCAGAT
>AHA_0174(sgaR) Score=6.5 Pos=-145 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CTGTGATAGCGCTATCATTT
# TF - TreR: AHA_3825
>AHA_3824(treB) Score=7.4 Pos=-48 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAATGGGAACGTTCCCATTT
# RNA - MOCO_RNA_motif
>AHA_1583(moaA) Score=92.5 Pos=-93 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AACTAGATGAACTCCGAGCGGTTTTGCCTAAGTCCTCATGATAGGGGGAAACCGCCGTCAGCCGATGTTCGAGCTGTAAGGGTCAGGAAAGAAATGCCCTGGCCTCCCGTATTTGGAAAGGTGTTTATGTCGCCACTGCAA
# TF - PhnR1: AHA_3982
>AHA_3983(phnS) Score=5.9 Pos=-294 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TTGCTGGAGTAGTCCAGCTT
>AHA_3983(phnS) Score=5.6 Pos=-152 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TAACTGACCTAGTCCAGAGG
>AHA_3982 Score=5.6 Pos=-218 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CCTCTGGACTAGGTCAGTTA
>AHA_3982 Score=5.9 Pos=-76 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAGCTGGACTACTCCAGCAA
# TF - MetJ: AHA_0588
>AHA_2807(mmuM) Score=7.2 Pos=-81 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGCCGTCTAGATGTTT
>AHA_2807(mmuM) Score=5.9 Pos=-89 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGCATTCTAGCCGTCT
>AHA_2685(metQ2) Score=6.4 Pos=-86 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGCCGTTTGGATGGCT
>AHA_1955(metR) Score=6.4 Pos=-134 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGCCATCCAGATGTTT
>AHA_1955(metR) Score=6 Pos=-126 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGATGTTTACACATCC
>AHA_0506(metY) Score=6.6 Pos=-54 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGACGTCTATCCATCT
>AHA_0074(btuB) Score=6.1 Pos=-266 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGAAATCTGGATGGCT
>AHA_3949(metF) Score=6.9 Pos=-59 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGACGTCCAAACATCC
>AHA_3949(metF) Score=7.5 Pos=-67 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGACGTTTAGACGTCC
>AHA_0588(metJ) Score=7.1 Pos=-97 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ACACCTCTAGACGTCT
>AHA_0588(metJ) Score=7.3 Pos=-89 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGACGTCTAAATGGCT
>AHA_3124(metK) Score=5.2 Pos=-90 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGACGTCCAGATGTAG
>AHA_0589(metB) Score=6.6 Pos=-127 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGACGTCTAGAGGTGT
>AHA_0589(metB) Score=7.4 Pos=-135 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGCCATTTAGACGTCT
>AHA_0489(metA) Score=5.6 Pos=-42 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGATGTCCAGACATAT
>AHA_0489(metA) Score=5.8 Pos=-50 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGGCTTCTGGATGTCC
>AHA_0432(metH) Score=6 Pos=-79 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGACGGCTAGATTTCC
>AHA_1956(metE) Score=6.2 Pos=-55 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAACATCTGGATGGCT
>AHA_1956(metE) Score=6.1 Pos=-63 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGATGTGTAAACATCT
>AHA_0432(metH) Score=6.1 Pos=-87 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGACAGATAGACGGCT
>AHA_2726(metT) Score=6.3 Pos=-138 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATCCATCTGGACGGCT
>AHA_0915(metN) Score=6.6 Pos=-118 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GGCCATCCAGACATCT
>AHA_0915(metN) Score=7.2 Pos=-150 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AGACGTCTAGATGTAT
# TF - ManR: AHA_2344
>AHA_2343(manA1) Score=6.5 Pos=-182 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAGGTATATCGATTAACCTT
>AHA_2343(manA1) Score=6.3 Pos=-50 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
CAGGTTAATCGATTTATCTC
>AHA_2344(manR) Score=6.3 Pos=-191 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GAGATAAATCGATTAACCTG
>AHA_2344(manR) Score=6.5 Pos=-59 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AAGGTTAATCGATATACCTT
>AHA_2345(pgiA) Score=5.7 Pos=-83 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTGGTTAATGGATTAACCCT
# TF - MetR: AHA_1955
>AHA_1955(metR) Score=5 Pos=-82 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
ATTGAATCCTTTTCAAC
>AHA_1956(metE) Score=4.8 Pos=-108 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
GTTGAAAAGGATTCAAT
# TF - YdcR: AHA_1639
>AHA_1640(PF01654) Score=9.1 Pos=-110 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AACTGTTATAGGTGT----------AACTGCATCTGTTAT
# TF - AHA_3778: AHA_3778
>AHA_3777(PF02566) Score=13.4 Pos=-110 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
AATTGGTCTG-(13)-AATTGGTCGG-(6)-AAGGCCATTA
# TF - PhrR: AHA_1100
>AHA_1099(COG3272) Score=6.5 Pos=-65 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TATACAACTTACAATTTTTTGTATA
>AHA_1099(COG3272) Score=6.1 Pos=-18 [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
TATACAAGGAGTGATGATATGTACA