# TF - CymR: CBO1178
>CBO1179(cysK) Score=5.9 Pos=-303 [Clostridium botulinum A str. ATCC 3502]
GAATACCTAGTAAACAAATAAGAATAA
>CBO1178(cymR) Score=5.7 Pos=-45 [Clostridium botulinum A str. ATCC 3502]
ATAATCATAGTAAATAGATAGGAATAC
# RNA - THF
>CBO0790(folT) Score=70.5 Pos=-195 [Clostridium botulinum A str. ATCC 3502]
ACAGAGTAGGTAATCACACGTTAAGGTTTAGAGGACGGGAAGTTGTCTCTAAAAGAAAAGTCTTTAAAAGATTTGCGATGTGTTACCGCATTCCGCTGTTAC
# TF - CBO1205: CBO1205
>CBO1205(CBO1205) Score=6.6 Pos=-50 [Clostridium botulinum A str. ATCC 3502]
TATAGTTAGTCATATAAGTAATTAACCAAC
# TF - NagR: CBO2835
>CBO2835(nagR) Score=6.2 Pos=-202 [Clostridium botulinum A str. ATCC 3502]
AAATTGGTATATACAACATA
# TF - ArgR: CBO1878
>CBO2670(argG) Score=4.7 Pos=-256 [Clostridium botulinum A str. ATCC 3502]
GTGCATAATTATAAAG
>CBO2670(argG) Score=4.6 Pos=-139 [Clostridium botulinum A str. ATCC 3502]
TTGCATATTTATTATT
>CBO2670(argG) Score=5.6 Pos=-119 [Clostridium botulinum A str. ATCC 3502]
ATGTATAATTATAAAA
>CBO1788(argT) Score=5.4 Pos=-62 [Clostridium botulinum A str. ATCC 3502]
TTTTATATTTATACAT
>CBO2018(artP) Score=5.2 Pos=-43 [Clostridium botulinum A str. ATCC 3502]
ATGCATAATTATACAG
# TF - LexA: CBO1795
>CBO2405(recA) Score=5.1 Pos=-38 [Clostridium botulinum A str. ATCC 3502]
AAGAACATAAGTTCGG
>CBO1795(lexA) Score=4.3 Pos=-71 [Clostridium botulinum A str. ATCC 3502]
TTGAACATTAGTTTGC
# TF - HrcA: CBO2961
>CBO2961(hrcA) Score=7.6 Pos=-48 [Clostridium botulinum A str. ATCC 3502]
TTAGCACTCGTTGCTAGTGAGTGCTAA
>CBO3299(groES) Score=8.1 Pos=-84 [Clostridium botulinum A str. ATCC 3502]
TTAGCACTCAATATTAATGAGTGCTAA
>CBO1985(htpG) Score=7 Pos=-103 [Clostridium botulinum A str. ATCC 3502]
TTAGCACTCACTAGCTTAAAGTGCTAA
# RNA - Cobalamin
>CBO0914(cbiP) Score=122.7 Pos=-323 [Clostridium botulinum A str. ATCC 3502]
TTTAATAAAAAGATTTAGGTGCCTTTACATAAAAGGTGAAAAGGGAATGTGGTAAAAGCCACAGCAGCCCCCGCTACTGTAATTGAGGACAAATCTTTCATAAACCACTCTTTAAAAAGGGGAAGGGAAAGATTAGGATGAATCATGAGCCAGGAGACCTGCCTAGATTTTTATTAGGGAAAC
# RNA - FMN
>CBO2866(ribD) Score=106.8 Pos=-343 [Clostridium botulinum A str. ATCC 3502]
ATGAATCCTTCAGGGCGGGGCGCAATTCCCCACCGGCGGTAAAGTCCGCGAGCTACTTGTAGCATGATTCGGTGAAACTCCGAAACCGACAGTTAAAGTCTGGATGAAAGATAGGATTAT
>CBO2921(ribB) Score=111.8 Pos=-366 [Clostridium botulinum A str. ATCC 3502]
GTATCCTTCAGGGTTGGGTGAAATTCCCTATCGGCGGTATAGCCCGCAAGCCATAAGGCAGATTCGGTTAAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGGTAAATAC
>CBO0178(ribU) Score=121 Pos=-211 [Clostridium botulinum A str. ATCC 3502]
AATATCTTCAGGGCGGGGTGTAATTCCCCACCGGCGGTAAAGCCCGCGAGCTATTTTTAGCATGATTCGGTTAAATTCCGAAGCCGACAGTAAAGTCTGGATGAAAGAAGATTGCAAT
# TF - CzrA: CBO0477
>CBO0477(czrA) Score=6.7 Pos=-68 [Clostridium botulinum A str. ATCC 3502]
CATATGAACAATTATTCATACG
# RNA - Glycine
>CBO1255(grdX) Score=38.9 Pos=-159 [Clostridium botulinum A str. ATCC 3502]
GACAAAACTCTGGAAAGCATTACGCACCGAAGGAGCAAAACTCTCAGGTTAAGATACAGAGATAAAAGTTA
>CBO1255(grdX) Score=20.8 Pos=-239 [Clostridium botulinum A str. ATCC 3502]
TATCCTTATAGGATAGCCGAAGGAACTAAGTGTTATTCCCATAAATAACATGAATATCTCAGGCAAATGGACC
# RNA - L10_leader
>CBO3490(rplJ) Score=59.2 Pos=-161 [Clostridium botulinum A str. ATCC 3502]
TGTAAAAATGAATATATCTCCGTAGACAGTGGGTGTTTTACATAATTAGTGAAAACTAAACCTACCTAGGAGTCCGATATAAAGTATATTGGGTCTCTCTGTCTTACGGAGAGACCTTTATTATTATAAAT
# RNA - L19_leader
>CBO2444(rplS) Score=21.9 Pos=-78 [Clostridium botulinum A str. ATCC 3502]
ACGGGCGGTCCTCTGCTTATATCATTTTATTACATAATTTAAGCAAGAACGTCAA
# RNA - L20_leader
>CBO3137(infC) Score=54.1 Pos=-162 [Clostridium botulinum A str. ATCC 3502]
TTTATGTAAGTAGAAACAGGCCGTTTCTCACCTTACAGCATGGCTAGTAAGGTTAGAGTATATAAATTTAATTTGTATTATTGTTTATGAAGACGGCTTATGCCGTCTTTTATTTATTATA
# RNA - L21_leader
>CBO2989(rplU) Score=32 Pos=-85 [Clostridium botulinum A str. ATCC 3502]
GGCTTTTGTAGACCGCTCAGAAAAGGTGTTAAACATGATTTGCATGTACCTTAATTGGCGAGACTGGAATGAGGA
# RNA - Lysine
>CBO3337(lysC) Score=95 Pos=-332 [Clostridium botulinum A str. ATCC 3502]
CTACTTATGGAGAGGTGCTGTAATTAATAGTATTTATTCTTAGTCGGCAGACTTTGAGGAATAAAAAAAGGAATTATGGCCGAAGGAAAAGGTTTGGCAAAAGTTTTTTCTGGCTTTGCACAAAATATGTGTAGGGCTGTCACTTGAAAAAGTGGAGAGCTGCATAGGTA
>CBO0421(lysW) Score=123 Pos=-334 [Clostridium botulinum A str. ATCC 3502]
AAGTAGATAGAGGTGCGATGTTAATTAGTACTTTTACGAAGGTAAGCGCTATGAAGTAAAAGGAAAGGGAATATCGCCGAAGTACACAGCTGATGCTTTAAGGTTGTATACTGGGGTTGCATAGAATATGTGTAACACTGTCACAAATTTATTTTGTGGAGAGCTATCATTCAAAG
>CBO0250(lysP) Score=112.4 Pos=-305 [Clostridium botulinum A str. ATCC 3502]
ACTGAGGTAGAGGTGCGAATTTTAAGAGTAAAGCTGTGGAGTTAAGCGCTGTGAAACAGTTTGAAAGGAATTTTTGCCGAAGCATACAACTAATGCTTTAATGTTGTATTGCTGGTTTTGTATAAAATATATGCAAGACTGTCACAGAAATAATTTGTGGAGAGCTATCATTTGTTG
# RNA - PreQ1
>CBO3177(queT) Score=24 Pos=-54 [Clostridium botulinum A str. ATCC 3502]
TAATAGACAGTTCGTAACCATCCTGTCTTTAATAAAAACTATGGAGGTAT
>CBO1552(COG1924) Score=23.7 Pos=-417 [Clostridium botulinum A str. ATCC 3502]
TAAAGACAGTTCGTAACCATCCTGTCTATAAATAAAACTAGGACGTAGC
# RNA - Purine
>CBO2901(pbuO) Score=80.2 Pos=-185 [Clostridium botulinum A str. ATCC 3502]
AAGTTAAGTGAATAGTTTTATCCATATAATCTTAACAATACGGGTTAAGAGTTTCTACCAGAGACCGTAAATCTCTGACTATGGGTAAGTCCAGTTTATTT
>CBO2878(purE) Score=83.1 Pos=-193 [Clostridium botulinum A str. ATCC 3502]
TAAAACAAATGAATATATCATCCATATAATCTCAATAATAAGGTTTGAGAGTCTCTACGAGGGAACCATAAATTCCCTGTCTATGGATGAATCTTAGCTATGC
>CBO2189(pbuO) Score=77 Pos=-224 [Clostridium botulinum A str. ATCC 3502]
AGACATAATTAAATAATTTGCTCATATAATTCCTGAATATGGAGGGAAGTTTCTACCAGATAACCGTAAATTGTCTGACTATGAGTGGAATCCTACTTATG
>CBO2006(pbuO) Score=79.1 Pos=-169 [Clostridium botulinum A str. ATCC 3502]
TACAAAATAAAATATTCGCTCTTATATAATTCTGATAATAGGGTTCAGAAGTTTCTACAGAGTAGCCTTAAACTACTTTACTATAGGAGATGTTATTAGGGTG
>CBO0316(pbuX) Score=82.5 Pos=-277 [Clostridium botulinum A str. ATCC 3502]
CATATATCATATAAAAAGCTCGTATATCATCGGTAATATGGTCCGAAAGTTTCTACCTGCTAACCATAAATTAGCAGACTACGGGGTATTGTGTATTTAGTAA
>CBO3296(guaB) Score=66 Pos=-185 [Clostridium botulinum A str. ATCC 3502]
ATCAATATTTTCAAAGTCAACTCATATATCCCCATAATAAGGGTGGGAGTATCTACCGAAAACCATAAATTTTCGACTATGAGTGATTATTAATAATGC
# RNA - PyrR
>CBO1479(pyrP) Score=27.3 Pos=-44 [Clostridium botulinum A str. ATCC 3502]
GCATCTTTTAAAATAGTCCAGAGAGACTAAAAGGGGGAAATAATAT
>CBO1478(pyrR) Score=42.1 Pos=-237 [Clostridium botulinum A str. ATCC 3502]
TTACCTTTAAAATGATCCTGTGAGGTCATAAGGCTATAAATAAATCTACACGGAATTATTATGCCTTTACTCACAGAGTAAAGGCATTTTTTATCT
>CBO3241(pyrB) Score=37 Pos=-195 [Clostridium botulinum A str. ATCC 3502]
TAAGACCTTTAAAATTAGTCCTGTGAGACTAAAAAGGAAGAGAAAAGCATATTTTAT
>CBO2073(codB) Score=37.8 Pos=-197 [Clostridium botulinum A str. ATCC 3502]
TAGTACCTTTAAAATTAGTCCAGAGAGACTAATAAGGTCGTATAGATTTAT
>CBO2821(pyrR) Score=29.8 Pos=-119 [Clostridium botulinum A str. ATCC 3502]
AAAGCCCTTTAAATGATCCTGAGAGATTGTAAGGCAGATATCTAATAAGTCTATACAAATGTCTTGGCGAAGGGTCGAGACATTTTTTGTTG
# RNA - SAM
>CBO3402(metT) Score=88.4 Pos=-248 [Clostridium botulinum A str. ATCC 3502]
ATTCTTATCCAGAGCGGCGGAGGGACTGGCCCTATGAAGCCCGGCAACCACTAAGGTGTTTTATTACTTTAAACGGTGCTAATTCCAGCAGGTTAAACCTGGTAGATAAGAT
>CBO1621(metF) Score=96 Pos=-225 [Clostridium botulinum A str. ATCC 3502]
ACTTATCAAGAGAGGCGGAGGGACTGGCCCTGTGAAGCCCAGCAACCTATATGAAAGTGAATATAAGGTGCTAAATCCTGCAGCATAAGCTGAGAGATGAGGATA
>CBO1876(metY) Score=85.3 Pos=-231 [Clostridium botulinum A str. ATCC 3502]
GCTCTTATCAAGAGTGGTGGAGGGATCAGGCCCTGTGAAGCCCGGCAACAGCTAGTTGAACCTAGAAATGTGCTAATTCCTGCAGTGGATTCACTGAGAGATGAGGG
>CBO1084(metN) Score=96.9 Pos=-206 [Clostridium botulinum A str. ATCC 3502]
TCTTATCAAGAGCGGTGGAGGGACTGGCCCTATGAAACCCGGCAACCAGTATATATTTTATACATGGTGCTAAATCCTGCAGATTTAACTGAAAGATGAGAAAA
>CBO0168(metK) Score=94.7 Pos=-180 [Clostridium botulinum A str. ATCC 3502]
TCTTATCAAGAGAGGTGGAGGGAAAAGGGCCCTATGAAACCCGGCAACCAGTGATATTCACTAAGGTGCCAATTCCTGCAGTATTATCTGCAAGATAAGAGAG
# RNA - T-box(Ala)
>CBO2564(alaS) Score=90.3 Pos=-234 [Clostridium botulinum A str. ATCC 3502]
ATATATAGTGATGATTAAAAGGAGTAAGTAAAGTAACTTTATATAGAGAGGAAGTGGTTGGTGAAAACTTCCTAAAGTTTGTACTGAAGGCTGTTTAGGAGCTATGCTGCAGGAGTTGTGAATACAGTTTTTGTATTTAAATTAGGGTGGTACCGCGGAATATAACTTTCGTCCCTTTT
# RNA - T-box(Arg)
>CBO1072(argS) Score=28.1 Pos=-236 [Clostridium botulinum A str. ATCC 3502]
GTATTATTATTTAGTCAACTAGAGTGGTACCGCGGATAATCCGTCTCTGT
# RNA - T-box(Asn)
>CBO0597(asnS) Score=97.4 Pos=-301 [Clostridium botulinum A str. ATCC 3502]
CAAAAACTATGAAGAGAAGAGTAGGTATAGATAATATTTTAAAGCGAGTGGATAATGGTGTAAGTTCCATAAATATGCTATATTGAAGAACATCTCGGAGTTTCTAACCGAAATTTTTTAAAAAGTAGGCTTAGAGGTTTCCAAAGCCTTACATTTGGATTGTATGATTATTATAGAGTCATACTTTAAAGTTGGCCTTTTGGCAATTTGGGTGGTACCGCGGAATATATACCTTTCGTCCCTGTAGG
# RNA - T-box(Asp)
>CBO1019(aspS3) Score=110.3 Pos=-387 [Clostridium botulinum A str. ATCC 3502]
ATTAAAATCTTTGATGGGAAGAGTAGATATTATTAAGTATCCGCAGCGAGTAGGGTTGGTGTAAGCCTATGAGAAAAATAATATTGAAAGACATCCCGGAGATGCTTATTTGAATAGAAATATTAAGTAGAATAAGCCGGTTTTCCTCCGTTAAAGGGACTAGAGATAACAAAGTATTAATACGTTGTTAAATTAAGATGGTACCGTGAATGTAAGATTTCACTCCTATA
# RNA - T-box(Cys)
>CBO0727(ubiG) Score=98.6 Pos=-407 [Clostridium botulinum A str. ATCC 3502]
GATAAATGCTATGATAAGAAATAGTAACATAAGGTAATCTATTAGAGAGAAATCCTCTTGGCTGAAAGGGATTTTTAGTGTAACTTATGTGAATGCATCTTTGAGCACTGTCTCGAAATATAGTAGACGACAGCGTGTACGCCCGTTAAAGCGTTGAGGTATTATTGTACCAAAATGAGATGTTATTGTATATTTACTGCAATAATAATTAGAGTGGAATCGCGGAAGTTAACTTCTGCCTCTAAA
>CBO0205(cysK) Score=121.7 Pos=-297 [Clostridium botulinum A str. ATCC 3502]
TAAAAACGTTGAAAAAGGAAAGTAGCATAATTAATCTTTTCAGAGAGGAAATTGTTTTGCTGAAAAATTTCTAAAGAAGATTTATGTGAAGTGCCCTTTGGAGTTGTGTACCGAATAAAGTAGGCTACATCGGGTTCACCCGTTATAGTGATAGGGTATAAATTTATTAAGTACCTGATAAAGTGAGATTTTAATATCTAACTAGAGTGGAACCACGGAGAATATACTTCGTCTCTATATT
>CBO0235(cysP1) Score=87.3 Pos=-395 [Clostridium botulinum A str. ATCC 3502]
ATTAAAAGCTATGAATAGAGAAAGTACGTTAATAGAAACTTTCAGAGAGAAGTCTCCCCTGGCTGAAAGAGACTTTAAGTGAAAATTATCAGAAGTGCCTCTAGGAGCTCTTTTTCGAATTAAGTAGATTTTAGCGTGGACGCCCGTTATAGCGTTAAGGTATGTTTGTGCCTGATATTTTTGAGTTATATGCATGTTTTTTATTTGCATATAAACAGAGTGGAACCGCGGAATATAACTTCTGCCTCTGTA
# RNA - T-box(Gly)
>CBO3517(glyS) Score=92.5 Pos=-220 [Clostridium botulinum A str. ATCC 3502]
ATAATATACGATGATAAAGAAGAGTAATAATAAATGTTATAAAGAGAGGCTGTGGTAGGTGAAAACAGTCAATGTTTATTATGAAGGGAGCTTTTGAGTATTTAATTAGAAAGTAGGGCTATAGCCAAAAAGGGTGGAACCGCGATTAAGTCGTCCCTTTG
# RNA - T-box(Ile)
>CBO0099(ileS) Score=91.1 Pos=-295 [Clostridium botulinum A str. ATCC 3502]
TAAAAGCGGTGAACAGGAAGAGTATTTAGATTGATTTCTTACAGAGAGTAGACATATGGTGAGAGTTTACAGAATAGATTTAAAGAAAATCCCCTGGGAGCTGGAGACCGAAAGATTTGCAAGTAAGTTCTCTCGTATTTCTGCGTTAAAGAATAGAGTCTAATA
# RNA - T-box(Leu)
>CBO0186(leuS) Score=134.4 Pos=-308 [Clostridium botulinum A str. ATCC 3502]
ATTAAAGGCTTTGAACAGGAGTAGTAATATTTATTCTATATAAAGAGAACTGTTGGCTGGTGAAAAACAGTATAGTAAAATATGAACTTGCCTGGGAGCTTGTCTATTAGAAATAGACACGGATAAAACCGTTATTTTTATAAGAGAAATCTATTAATTCATAGGTTTAATTAGAGTGGTACCGCGGATAACCTTTCGTCTCTATA
# RNA - T-box(Met)
>CBO0075(metS) Score=93.8 Pos=-302 [Clostridium botulinum A str. ATCC 3502]
TAAATGCTATGAAGGAAAGAGTAATAAGTGAAAATATCTAAAGAGAGTCGGATAAGGTGAAAGCCGATGATATGGAAATTTATGAATATGGCTCCAGAGCAGGTTGTCTGAAGTATAGTAGGATAGCACGGTAACAACCGTTATATTGTAAAGTGATAACATATTATATGAAGTCACTTATTAAGGCTTTTACTGTGAAGTAAAGGTGAATTAGAGTGGTACAGCGAAATTTACGCCTCTATATA
# RNA - T-box(Phe)
>CBO3131(pheS) Score=114.9 Pos=-290 [Clostridium botulinum A str. ATCC 3502]
ATATTAAACTATGATGAAGAGAGTAAGTTTAAAATATTTTTAAGAGAATGTGGGTCTTAGGCTGAAAGCCTACTAAAATGTTTTATACTGAAGTTCACTTCTGAGTTCTAAAAGTGAAATAGTAGTAGCTTTTAGCGATACAGTATCGATAACACTGACTAAGAGAATATAAATTTTTATTTATATTAATTAGGGTGGTACCGCGGATTTAGTTCGTCCCTTTA
# RNA - T-box(Pro)
>CBO3344(proS2) Score=117.4 Pos=-270 [Clostridium botulinum A str. ATCC 3502]
TTTTATAGCAAAGAAGAGGAATAGTAAATTCCTAGGCTTTTTACAGAGAGGGATGTAAGATGAGAATTCCTAAAAGCTAAGTTTTGAACCAGCCTCCGAGTTCTGTACTGAATTTAAGTAGGATACAGCGGAAAAATTCCGTTATCAATAAAAGTGAACATATTTTATATATGTTAACAAGGGTGGTACCACCGACACAACTTCGGTCCCTGTA
# RNA - T-box(Ser)
>CBO0510(serS) Score=92.7 Pos=-285 [Clostridium botulinum A str. ATCC 3502]
AAACAGTGTTGATAAAAGCTACGATTTATAAATTTCTTCAGAGAGCCGATGTTTGGTGAGAATCGGTGAAAGGTTAAATCTTTCCACTTTTGGAGCTGCTAGTGATAAACTAAAAGGTTAGTATCCTTTATCTTACTATTGTCGAGTGGCTGGTTCTTATGGTAGACTGGCAATTTGGGTGGCAACGCGGATACTTCCGTCCCATATTT
>CBO0016(serS) Score=131.1 Pos=-283 [Clostridium botulinum A str. ATCC 3502]
TAAAACCTGTGAAGAGGAGCAGTAACTATATGAAGTTTTAAGAGAGTTAACGGCTGGTGTAAGTTAATAACCTTATATTGTGAATCCACCTCTGAGGGACTGTGGTAAAAACAGTACGGATAACCGTTATAATTAAGAGAGGATCATTTTATGATCAATTAGGGTGGCAACGCGGAGCTTTTCGTCCCTTTTAT
# RNA - T-box(Thr)
>CBO3138(thrZ) Score=113.4 Pos=-271 [Clostridium botulinum A str. ATCC 3502]
TTTATAAACTATGAAAAGGAAGAGTAAATAGATTACTATTCAAAGAGAAGAAGATCCATAGGCTGAAAGATTTTCTGAATAAGTTCTATTGAAAACCACCTTAGAGTTGTATACTGAATTAAGTAAGTATAACCGTTTCCTGCGTTAAAGGATAAAGAGATAATAGTAGTGCACTGCTATTAAATTGGGTGGAACCACGAAAATACACTCGTCCCATGT
# RNA - T-box(Trp)
>CBO3331(trpS) Score=97.2 Pos=-288 [Clostridium botulinum A str. ATCC 3502]
TTAATATTTTAAGAAGGGAAAAAGTAGGTTTAAAAACAAACTTAAAGAGAGCTGTAGAGGGTGGAATTACAGTAGTTATGATTAGACTGAATGGGCCCCGGAAAACCTAAGTGAAATAAAAGTAGCTCTAGGCGTAAGTCTTACGTTATAAAGATAGAATTTTATATTCGTAGAGGAGAGATTTAAAGTTTCTTGAATATAGGTGGTACCGCGATAATTCGCCCTATAA
>CBO2919(trpP) Score=105.6 Pos=-478 [Clostridium botulinum A str. ATCC 3502]
CTAATTCATTGATAAGGAAGAGTAACTAAGATAAATATTCAAAGAGAGTTAAGGATGCTGGAATCTTAACAATAGAAGTTTTAGTGAATGGACCTTGGAGAAATAAAGCGAAATCTTATATAGAAAGTAGTATTTATCGGGAGCCTGCCGTTAAAAGGGATAGGGTATGTTAGTACCTGAATTTGAGATATGTTTAAATTACTATTATTTAAGCATAAATTAGGTGGCACCGCGAATATAATCTTCGTCCTAATGAT
# RNA - T-box(Val)
>CBO3165 Score=109.7 Pos=-298 [Clostridium botulinum A str. ATCC 3502]
AAATAAAGCTTTGAAAAAGAGGAGTAGAGATAAAAAGTATTAAGAGAGGAAAACTCAAAGGCTGAAAGGTTTTCTATATATAATTTATCTTGAAGGTAGCTTTGGAGCTTCTTTACTGAGTTTAGTAAGTAAAGACGGATTTCTTATTCGTTAAATATACAAGAGCCTGTAGTTTTGCAGGAAAAAAGGTGGTAACGCGAGGTTTTTCGTCCTTTTA
# RNA - glmS
>CBO3410(glmS) Score=58.5 Pos=-224 [Clostridium botulinum A str. ATCC 3502]
GAAACTCAGATTAGCATCTGAGTAAGTTCCACTAACCAAATTGAAAATTTGGAGTGTCACTTAAGTTGACGAGGATATAGGAGTATCGAAATTTCGGCGGATATCCTATGGGATCTCACAGCCCTAAAAGCTATAATAAAAGTTAGAAGTGATTCTGATTACAAAAAAGCTTTAGTGAGGAC
# RNA - TPP
>CBO0556(thiT) Score=78.2 Pos=-160 [Clostridium botulinum A str. ATCC 3502]
TTAAGTGCTAGGGGTGCCAAAAGTTATGGCTGAGAAATGATAAATTCATTAACCCTCTAACCTGATCTGGTTAATACCAGCGTAGGAAAGCTTGAGTGTTAATAAAA
>CBO0451(thiD) Score=71.3 Pos=-409 [Clostridium botulinum A str. ATCC 3502]
CCTTATGTTGTGGGGGTGCCCCTTCGGGCTGAGAAGATTTAAATATCTAACTCTAATAACCTGATCCAGATAATACTGGCGTAGGGAAGCAGCATATCTAATAAT
>CBO2254(thiW) Score=54.7 Pos=-410 [Clostridium botulinum A str. ATCC 3502]
AATTTTTCAAAAGGGGAGCTTGCAATGCAGGCTGAGAGGAAATGTATATTTCGACCCATAACTTGATTCGGATAATGCCGACGTAAGGAAATATTAATTTATACTA
>CBO2913(purF2) Score=75.7 Pos=-191 [Clostridium botulinum A str. ATCC 3502]
TATGTAAATGCAGGGGTGCCGTAAAGGCTGAGAGGAAAGATTTCTAACCCTTTGAACCTGATGTAACTAAGATTACCGTAGGGAGCATTATAGTATATATA
# TF - Zur: CBO3220
>CBO3405(rpsD2) Score=5.8 Pos=-92 [Clostridium botulinum A str. ATCC 3502]
ATATTGAAAATCATTTTCAGTTT
>CBO1363(znuA) Score=6.4 Pos=-86 [Clostridium botulinum A str. ATCC 3502]
TAAATGCAAATAGTTTGCAATAA
>CBO1362(znuC) Score=6.4 Pos=-157 [Clostridium botulinum A str. ATCC 3502]
TTATTGCAAACTATTTGCATTTA
>CBO0346(fld) Score=5.2 Pos=-78 [Clostridium botulinum A str. ATCC 3502]
TAAATGAAATTGATTCTCACTTT
# TF - NiaR: CBO0009
>CBO1448(nadA) Score=6.2 Pos=-51 [Clostridium botulinum A str. ATCC 3502]
TATATATGTATATACACATGTA
>CBO2620(niaX) Score=6 Pos=-41 [Clostridium botulinum A str. ATCC 3502]
TACTAATGTATATACACTTAAC
# RNA - ydaO-yuaA
>CBO1324(lysM/COG3773) Score=79.4 Pos=-129 [Clostridium botulinum A str. ATCC 3502]
TAAACAAATCATGCCGAATCTTCTTTATGAAGTACCGGGGATACTCTTGGGGTGAATCTCTTAGGAATAGGGTACCTCTAACCCGAACCCGTCAACTAACCTGGGAGGCAATATGGAGGGATTTA
>CBO3432(COG3773) Score=94.7 Pos=-124 [Clostridium botulinum A str. ATCC 3502]
ACTATTATTAGCCTAAGTTTTTTAAAACACGGGGAAACCAAATTTTGGGGTGAATCGTAAAATTACGTAGGTTATACCTTTTCCGAACCCGTCAGCTAACCCCGTAGGCAAAAGGAGTGAGAAAATGA
# RNA - ykkC-yxkD
>CBO2829 Score=43.6 Pos=-185 [Clostridium botulinum A str. ATCC 3502]
GGGACTAGATAGCTAGGGTTCCACCTTAAAATTTTAAGGGTTTGTGACCAAGCGCTATAGCTCTTGTTTTGCAAGAGGCACCTATTGGAATAAAATGCCCGAGGGGG
# RNA - ykoK
>CBO0203(mgtE) Score=149.1 Pos=-368 [Clostridium botulinum A str. ATCC 3502]
AATAATGTACGTTAGGTGAGGCTCCTATATAGATATACGCTACTGCCCGGAAACATCGAGAGATGCCAATGGGTCACCAGGTATTACCGAAGTAAGGTTTTACTTAATGTAGCTGGCTGTGGTCCAAAGCTATATAGTGCTAAAACTCAACGATTGATGTTAAAGTT
>CBO2870 Score=92.5 Pos=-231 [Clostridium botulinum A str. ATCC 3502]
AAATAAACCTCGGTAGGTGAGGTTACTACAAGGATACGGGTTGTTGCCGTAAAAGAATGGAAACATTCTTAACTGGTTAGCAGGTTTTGCCGAACAAAGAAGGCATAATCTAATACAGCTTCATTGCCTTGCAGAGCCAAAACTTGAACGAGAAAGTGTTGTT
# RNA - yybP-ykoY
>CBO1290(COG1971) Score=39.2 Pos=-183 [Clostridium botulinum A str. ATCC 3502]
TAATGAGTATGAGGGAGTAATTGGCACAATATTTTAATATTGTGTGGCAAAGTCAACATATTGACTTGTAAAAGTCTGGCTTGTCTTGAATAATGAGACTCATGTATAGTTTTT
>CBO1545(atcL) Score=46.4 Pos=-412 [Clostridium botulinum A str. ATCC 3502]
ATGTGTTATTAAAAGGGAGTAGTATAAAATATAACATCAACATGCCGGTTAGTTTTCTAATCTGGTGTTATATACCAAAGTTTGGTTGCAAGACTTTTAATATAATT
>CBO0532(atcL) Score=69.3 Pos=-240 [Clostridium botulinum A str. ATCC 3502]
TCATGAAGACAAGGGGGAGTAGCAAAAGTTAAGTACTTTAAACTATTCGTCATTACGGATTTAAATCCCGGATAGTTTGCTCTTTAAGAGATTGCAAGACCTTTGTCCTATAT
# TF - YhcF: CBO0558A
>CBO0558A(yhcF) Score=5.2 Pos=-43 [Clostridium botulinum A str. ATCC 3502]
GTGTACTATTTAGATAGTACAG
# TF - CcpA: CBO0100
>CBO1767(CAC2689) Score=3.9 Pos=-106 [Clostridium botulinum A str. ATCC 3502]
CTGAAAATATTAATAT
>CBO0513 Score=4 Pos=-122 [Clostridium botulinum A str. ATCC 3502]
TAAAAAATGTTAAATT
>CBO0324(lrgA) Score=4.3 Pos=-63 [Clostridium botulinum A str. ATCC 3502]
ATGAAAAAGTAATAAA
>CBO1292(tal) Score=4 Pos=-175 [Clostridium botulinum A str. ATCC 3502]
GAGAAAACGTTATAAA
>CBO1292(tal) Score=4.1 Pos=-219 [Clostridium botulinum A str. ATCC 3502]
ATAAAAATTTTAAAAT
>CBO0278(glvA) Score=4.1 Pos=-42 [Clostridium botulinum A str. ATCC 3502]
ATGAAAATAAATACAA
>CBO2085(mutT1) Score=3.9 Pos=-42 [Clostridium botulinum A str. ATCC 3502]
AAAAAAATTATTTTAT
>CBO2760(nifJ2) Score=4.3 Pos=-191 [Clostridium botulinum A str. ATCC 3502]
TTTAAAATGATTTTTA
>CBO1873(spoIVB) Score=4.4 Pos=-168 [Clostridium botulinum A str. ATCC 3502]
ATGTAAATATTTTTTT
>CBO0193(agaY) Score=4 Pos=-154 [Clostridium botulinum A str. ATCC 3502]
TTAAAAAATATATAAA
>CBO1090 Score=4.2 Pos=-154 [Clostridium botulinum A str. ATCC 3502]
AATTAAAAGATATAAT
>CBO1090 Score=4 Pos=-131 [Clostridium botulinum A str. ATCC 3502]
AGGAAAAAAATATTAT
>CBO1090 Score=4 Pos=-87 [Clostridium botulinum A str. ATCC 3502]
ATATAAATTATTAAAA
>CBO1005(glcA) Score=4.1 Pos=-177 [Clostridium botulinum A str. ATCC 3502]
ATAAAAAAAATTTTTA
>CBO1005(glcA) Score=4.8 Pos=-149 [Clostridium botulinum A str. ATCC 3502]
TTGAAAACGTTATAAT
>CBO0409(clpB) Score=4.1 Pos=-52 [Clostridium botulinum A str. ATCC 3502]
ATAAAAAAATTAAAAA
>CBO0409(clpB) Score=4.6 Pos=-76 [Clostridium botulinum A str. ATCC 3502]
TTGAAAATATTTAAAT
>CBO2845(ptnD) Score=3.9 Pos=-279 [Clostridium botulinum A str. ATCC 3502]
TATCAAATGTTTTAAA
>CBO0654(licT) Score=4 Pos=58 [Clostridium botulinum A str. ATCC 3502]
AAGAAATAATTATAAT
>CBO2785(glpF) Score=4.3 Pos=-150 [Clostridium botulinum A str. ATCC 3502]
TTGAAAACGTAAACAA
>CBO2784(glpK) Score=4.3 Pos=-77 [Clostridium botulinum A str. ATCC 3502]
TTTTAAAAGATTATTT
>CBO2768(glpP) Score=4.2 Pos=-33 [Clostridium botulinum A str. ATCC 3502]
ATTAAAAAATTAATAT
>CBO0976(gldA) Score=3.9 Pos=-70 [Clostridium botulinum A str. ATCC 3502]
ATGTAAACGATATTAC
>CBO0976(gldA) Score=3.9 Pos=-36 [Clostridium botulinum A str. ATCC 3502]
AATAAAAATATTTTTA
>CBO2754(gamP) Score=4.4 Pos=0 [Clostridium botulinum A str. ATCC 3502]
TTGAAAAATATTTTAA
>CBO1014(aspC1) Score=4.1 Pos=-50 [Clostridium botulinum A str. ATCC 3502]
ATGTTAAAGATAATAA
>CBO1014(aspC1) Score=4.5 Pos=-94 [Clostridium botulinum A str. ATCC 3502]
ATGAAAAATATTTAAA
>CBO1014(aspC1) Score=4.1 Pos=-224 [Clostridium botulinum A str. ATCC 3502]
ATATAAAAAATTATAT
>CBO2780(mepA) Score=4.1 Pos=-139 [Clostridium botulinum A str. ATCC 3502]
TAGAAAAATTTATAAA
>CBO3516(murD) Score=4.5 Pos=-73 [Clostridium botulinum A str. ATCC 3502]
TTTAAAATGTTTTATA
>CBO2620(niaX) Score=4.3 Pos=-207 [Clostridium botulinum A str. ATCC 3502]
ATTTAAATAATTTAAT
>CBO0267(pagL) Score=4.3 Pos=-219 [Clostridium botulinum A str. ATCC 3502]
TAGAAAAAGATATTAA
>CBO0267(pagL) Score=4.5 Pos=-79 [Clostridium botulinum A str. ATCC 3502]
TTGATAATGATTAAAT
>CBO0277(glvC) Score=4.7 Pos=-161 [Clostridium botulinum A str. ATCC 3502]
ATGTAAACATTTTAAT
>CBO2404(rny) Score=4.1 Pos=-208 [Clostridium botulinum A str. ATCC 3502]
ATGAAAAAATATATAA
>CBO2233(ltaE) Score=4.2 Pos=-52 [Clostridium botulinum A str. ATCC 3502]
ATGCAAACTTTTTTAT
>CBO1816 Score=4.1 Pos=-32 [Clostridium botulinum A str. ATCC 3502]
TATTAAATATTTAAAT
>CBO2572 Score=4.6 Pos=-49 [Clostridium botulinum A str. ATCC 3502]
TTGAAAATAATTAAAT
>CBO3139(ytxC) Score=4.5 Pos=-108 [Clostridium botulinum A str. ATCC 3502]
TTGAAAAAAATTTCAA
>CBO2472 Score=4.6 Pos=-33 [Clostridium botulinum A str. ATCC 3502]
ATGAAAAATTTTACAA
>CBO2885(ygeW) Score=4.3 Pos=-208 [Clostridium botulinum A str. ATCC 3502]
ATTAAAATGATAAATT
>CBO3245(yjiM) Score=4.5 Pos=-85 [Clostridium botulinum A str. ATCC 3502]
ATGAAATAGATTTAAT
>CBO3312(pykA) Score=4.2 Pos=-189 [Clostridium botulinum A str. ATCC 3502]
TAGTAAATTTTTAAAT
>CBO3312(pykA) Score=4.5 Pos=-104 [Clostridium botulinum A str. ATCC 3502]
TTGAAAAAATTTTATA
>CBO0529(arcD) Score=4.1 Pos=-219 [Clostridium botulinum A str. ATCC 3502]
AAAAAAACATTTTATA
>CBO0529(arcD) Score=4.1 Pos=-145 [Clostridium botulinum A str. ATCC 3502]
TTAAAAATGTATTTAT
>CBO0529(arcD) Score=4.5 Pos=-67 [Clostridium botulinum A str. ATCC 3502]
ATGAAAATTTTTTATT
>CBO0225(cggR) Score=4.5 Pos=-125 [Clostridium botulinum A str. ATCC 3502]
TTGAAAAATTTTAAAA
>CBO2288 Score=4.1 Pos=-133 [Clostridium botulinum A str. ATCC 3502]
TAGAAAATTTTTAATA
>CBO0522 Score=4.1 Pos=-83 [Clostridium botulinum A str. ATCC 3502]
ATTTAAAAAATATAAA
>CBO0270 Score=4.1 Pos=-232 [Clostridium botulinum A str. ATCC 3502]
ATTAAAAAATTATTTT
>CBO0270 Score=4.5 Pos=-174 [Clostridium botulinum A str. ATCC 3502]
TTGAAAAAAATTATAT
>CBO1472(aroF) Score=4.5 Pos=-101 [Clostridium botulinum A str. ATCC 3502]
ATTTAAAAGTTTAAAA
# TF - Rex: CBO3306
>CBO3202(crt) Score=5 Pos=-136 [Clostridium botulinum A str. ATCC 3502]
TAGATAAATTTTTATCAT
>CBO3202(crt) Score=4.8 Pos=-93 [Clostridium botulinum A str. ATCC 3502]
TTGTTAAAATAATAGCTA
>CBO1643(bdh) Score=4.8 Pos=-261 [Clostridium botulinum A str. ATCC 3502]
TAGTTATTATTTTATCAT
>CBO1519(ldh) Score=5.3 Pos=-161 [Clostridium botulinum A str. ATCC 3502]
ATGTTAATTAATTAACTA
>CBO1438(adhA) Score=5 Pos=-236 [Clostridium botulinum A str. ATCC 3502]
TTGTTAAAAAATTATTAA
>CBO2217(butA) Score=5.5 Pos=-51 [Clostridium botulinum A str. ATCC 3502]
ATGTTAATTAATTAACAT
>CBO1579(COG1115) Score=5 Pos=-144 [Clostridium botulinum A str. ATCC 3502]
TTGAGAGAAAATTAACAA
>CBO0345(adhE) Score=5.7 Pos=-178 [Clostridium botulinum A str. ATCC 3502]
ATGATAAATATTTAACAA
>CBO0345(adhE) Score=5.8 Pos=-121 [Clostridium botulinum A str. ATCC 3502]
TTGTTAAATAAATAACAA
>CBO1438(adhA) Score=5.4 Pos=-87 [Clostridium botulinum A str. ATCC 3502]
TTGTTAAAAAAATAACTA
>CBO0246(maeB) Score=5.7 Pos=-145 [Clostridium botulinum A str. ATCC 3502]
TTGTTAATAATATAACAA
# TF - YcxD: CBO2012
>CBO2013(ycxC) Score=13.6 Pos=-127 [Clostridium botulinum A str. ATCC 3502]
ACCTGTACC-(0)-GGTATAGAT-(12)-TATTGTACC
# TF - MalR2: CBO1601
>CBO1604(malL) Score=6.5 Pos=-79 [Clostridium botulinum A str. ATCC 3502]
TTGCGCAAACGATTGCTCAA
>CBO1203(amyB) Score=5.6 Pos=-154 [Clostridium botulinum A str. ATCC 3502]
TTGTGCAAACGATTTCACTA
# TF - YtrA: CBO2790
>CBO2791 Score=6.9 Pos=-84 [Clostridium botulinum A str. ATCC 3502]
AAGTGTATTAGGTGTAGTAGTACACTT
# TF - Cbei_4343: CBO2918, CBO2066
>CBO2918(Cbei_4343) Score=8.2 Pos=-61 [Clostridium botulinum A str. ATCC 3502]
AACACATACTGTATATATTATATATATACAGTATGTACG
>CBO2066(Cbei_4343) Score=6 Pos=-55 [Clostridium botulinum A str. ATCC 3502]
TGTGTATAGTGTGTATTGTACATATACACACTGATTATG
# TF - TreR: CBO1989
>CBO1987(treP) Score=5.7 Pos=-106 [Clostridium botulinum A str. ATCC 3502]
AACATGTACGTACAAGAT
>CBO1987(treP) Score=5.4 Pos=-73 [Clostridium botulinum A str. ATCC 3502]
CACTTGTACGTACATCTT
# TF - NrdR: CBO2530
>CBO2814(nrdA) Score=5.5 Pos=-176 [Clostridium botulinum A str. ATCC 3502]
ATACAATATATAGTGA
>CBO2814(nrdA) Score=5.4 Pos=-145 [Clostridium botulinum A str. ATCC 3502]
ATACAATATATAGAGT
>CBO0094(nrdD) Score=5.4 Pos=-32 [Clostridium botulinum A str. ATCC 3502]
ACACAATATGTTGTAG
>CBO0094(nrdD) Score=4.8 Pos=0 [Clostridium botulinum A str. ATCC 3502]
ATGCTATATGTTGTGA
# TF - BirA: CBO1117
>CBO2260(bioY1) Score=9 Pos=-93 [Clostridium botulinum A str. ATCC 3502]
TTGTCAAC---------------GTTGACAA
# TF - IscR: CBO2570
>CBO2569(iscR) Score=6 Pos=-43 [Clostridium botulinum A str. ATCC 3502]
ATAAATCATAGTAAAGTGGTCAACATTAA
>CBO2569(iscR) Score=4.8 Pos=-82 [Clostridium botulinum A str. ATCC 3502]
ATATTGTTGACAGGTTTAGTCTGATTTGC
# TF - CBY_0654: CBO2034
>CBO2035(phzF) Score=9.6 Pos=-100 [Clostridium botulinum A str. ATCC 3502]
TAATTGTCT---ATACAATTA
>CBO2034(CBY_0654) Score=9.6 Pos=-38 [Clostridium botulinum A str. ATCC 3502]
TAATTGTAT---AGACAATTA
# TF - PdxQ: CBO0640
>CBO0636(CBO0636) Score=8.2 Pos=-176 [Clostridium botulinum A str. ATCC 3502]
CTGTAT-(18)-CCGTCT-(10)-GGACGG
# TF - HcpR: CBO2923
>CBO1658 Score=5 Pos=-143 [Clostridium botulinum A str. ATCC 3502]
GAGTAACATCCGTTACAG
>CBO2922(frdX) Score=5.9 Pos=-77 [Clostridium botulinum A str. ATCC 3502]
TGGTAACATTAGTTACAG
>CBO2923(hcpR) Score=5.9 Pos=-45 [Clostridium botulinum A str. ATCC 3502]
CTGTAACTAATGTTACCA
>CBO2792(hcp) Score=6 Pos=-122 [Clostridium botulinum A str. ATCC 3502]
TTGTAACATAGGTTACAG
>CBO2926 Score=5.7 Pos=-110 [Clostridium botulinum A str. ATCC 3502]
TAGTAACATTAGTTACTG