# TF - NsrR: Bamb_1786
>Bamb_0627(hmp) Score=4.9 Pos=-36 [Burkholderia cepacia AMMD]
GATGTATCGTATGTGCATG
>Bamb_4090(hcp) Score=4.9 Pos=-111 [Burkholderia cepacia AMMD]
GATGCATCAGAGAAGCATC
# TF - HexR: Bamb_0554
>Bamb_0554(hexR) Score=5.5 Pos=-210 [Burkholderia cepacia AMMD]
TAGTAGAAAAACTACAT
>Bamb_0554(hexR) Score=5.8 Pos=-67 [Burkholderia cepacia AMMD]
ATGTAGATTTTCTACAA
>Bamb_0555(edd) Score=5.8 Pos=-242 [Burkholderia cepacia AMMD]
TTGTAGAAAATCTACAT
>Bamb_0555(edd) Score=5.5 Pos=-99 [Burkholderia cepacia AMMD]
ATGTAGTTTTTCTACTA
>Bamb_0827(zwf) Score=5.7 Pos=-83 [Burkholderia cepacia AMMD]
TTGTAGTTAAACTACAA
# TF - NrdR: Bamb_0684
>Bamb_0497(nrdA) Score=5.3 Pos=-306 [Burkholderia cepacia AMMD]
GTACTAGATATAGTGT
>Bamb_0497(nrdA) Score=5.7 Pos=-337 [Burkholderia cepacia AMMD]
CCACTATACTTGGTGC
# TF - Zur: Bamb_2647
>Bamb_3871(omr) Score=5.8 Pos=-217 [Burkholderia cepacia AMMD]
GAGATGATATAACATATCATTTC
>Bamb_2647(zur) Score=6.3 Pos=-54 [Burkholderia cepacia AMMD]
AGGGAGATACGTTATATCATCGC
# TF - LldR: Bamb_2802
>Bamb_2802(lldR) Score=5.3 Pos=-51 [Burkholderia cepacia AMMD]
AATTGGTTGGGCCAATC
>Bamb_2803(lldE) Score=5.9 Pos=-107 [Burkholderia cepacia AMMD]
GATTGGCCCAACCAATT
# TF - HutC: Bamb_5835, Bamb_5462, Bamb_2210
>Bamb_1095(hisT) Score=5.9 Pos=-77 [Burkholderia cepacia AMMD]
CAAGTTGTATAGACAACTTG
>Bamb_2211(hutH) Score=5.5 Pos=-71 [Burkholderia cepacia AMMD]
GGGGTTGTCTAGACAAGTTC
>Bamb_2211(hutH) Score=5.6 Pos=-26 [Burkholderia cepacia AMMD]
GAACTTGTCTAGACAGGATT
>Bamb_2212(COG834 (HisJ)) Score=5.6 Pos=-148 [Burkholderia cepacia AMMD]
AATCCTGTCTAGACAAGTTC
>Bamb_5462(hutC) Score=3.7 Pos=-225 [Burkholderia cepacia AMMD]
GCATTTGTCTATACTTTTCC
>Bamb_1129(COG1457 (CodB)) Score=5.7 Pos=-150 [Burkholderia cepacia AMMD]
CAAGTTGTATATACAAGAAT
>Bamb_5463(hisJ) Score=5.3 Pos=-113 [Burkholderia cepacia AMMD]
AAAGTTGTATGTACAACTTG
>Bamb_2212(COG834 (HisJ)) Score=5.5 Pos=-103 [Burkholderia cepacia AMMD]
GAACTTGTCTAGACAACCCC
>Bamb_4897(COG834 (HisJ)) Score=4.4 Pos=-137 [Burkholderia cepacia AMMD]
CGAGCGGTCTAGACTGCATC
# TF - HypR: Bamb_6120
>Bamb_6120(hypR) Score=4.2 Pos=-74 [Burkholderia cepacia AMMD]
ATTGTAGAAAAT
>Bamb_6107(hypD) Score=4.9 Pos=-207 [Burkholderia cepacia AMMD]
ATTGTATAAAAT
# TF - IscR: Bamb_2164
>Bamb_2164(iscR) Score=7.8 Pos=-42 [Burkholderia cepacia AMMD]
ATACTTGACCAAAATCGTCAAGATT
>Bamb_2164(iscR) Score=7.8 Pos=-69 [Burkholderia cepacia AMMD]
ATACTTGACTAAAATCGTCAAATAT
# TF - NagQ: Bamb_2885
>Bamb_2885(nagQ) Score=4.9 Pos=-71 [Burkholderia cepacia AMMD]
TGGTATTATGGTGGTTAT
# TF - GlcC: Bamb_4937
>Bamb_4938(glcD) Score=4.6 Pos=-117 [Burkholderia cepacia AMMD]
ACTGGTACGACCACG
>Bamb_4938(glcD) Score=4.6 Pos=-223 [Burkholderia cepacia AMMD]
ACTGGTATGACCACT
>Bamb_4937(glcC) Score=5.6 Pos=-121 [Burkholderia cepacia AMMD]
CGTGGTCGTACCAGT
>Bamb_4937(glcC) Score=5.9 Pos=-15 [Burkholderia cepacia AMMD]
AGTGGTCATACCAGT
# TF - NtrC: Bamb_2184
>Bamb_1085(amtB) Score=4.6 Pos=-255 [Burkholderia cepacia AMMD]
CGCGCCAGACCGGTGCA
>Bamb_3937(narK) Score=4.1 Pos=-288 [Burkholderia cepacia AMMD]
CGCACCACATCTGTGCC
>Bamb_3937(narK) Score=4 Pos=-309 [Burkholderia cepacia AMMD]
CGCACGGCGACAGTGCT
>Bamb_2186(glnA) Score=5.1 Pos=-242 [Burkholderia cepacia AMMD]
TGCACCATTTCAGTGCG
# TF - RbsR: Bamb_1506
>Bamb_1503(rbsB) Score=6.7 Pos=-77 [Burkholderia cepacia AMMD]
GGGCGCAAACGTTTGCTCGC
# TF - ModE: Bamb_3225
>Bamb_3228(modA) Score=5.9 Pos=-57 [Burkholderia cepacia AMMD]
CGTTATAACCTCCCCTATATTACG
# TF - LexA: Bamb_1496
>Bamb_0942(PF04055) Score=6.5 Pos=-34 [Burkholderia cepacia AMMD]
TACTGTATAAATATACAGTA
>Bamb_4970(PF10616) Score=6.2 Pos=-89 [Burkholderia cepacia AMMD]
TACTGTATGTTTGTACAGTA
>Bamb_6248(uvrA) Score=6.2 Pos=-57 [Burkholderia cepacia AMMD]
AACTGTATGAATATACAGTA
>Bamb_1496(lexA) Score=5.9 Pos=-45 [Burkholderia cepacia AMMD]
TACTGTATAAAAATACAGCT
>Bamb_1496(lexA) Score=5.8 Pos=-25 [Burkholderia cepacia AMMD]
CACTGTCTATCCATACAGTT
>Bamb_2699(recA) Score=6 Pos=-93 [Burkholderia cepacia AMMD]
CACTGTTTTTTTATACAGTG
>Bamb_3559(BPSS1334) Score=5.3 Pos=-29 [Burkholderia cepacia AMMD]
TACTGGATTTATGAACAGTG
>Bamb_2888(imuA) Score=6.1 Pos=-32 [Burkholderia cepacia AMMD]
TACTGTATATCCATACAGTT
>Bamb_2179(dinB) Score=5.9 Pos=-4 [Burkholderia cepacia AMMD]
CACTGTGTTTTTGTACAGTA
>Bamb_3800(PF08774) Score=5.4 Pos=-30 [Burkholderia cepacia AMMD]
ACCTGTACAAACGTACAGTG
# TF - PsrA: Bamb_1417
>Bamb_0997(fabH) Score=5.3 Pos=-178 [Burkholderia cepacia AMMD]
GATCAAACGGGGTTATGATG
>Bamb_1417(psrA) Score=5.6 Pos=-74 [Burkholderia cepacia AMMD]
ATAAAAACGGCTGTTTGAAT
# TF - RutR: Bamb_5968
>Bamb_5968(rutR) Score=7 Pos=-195 [Burkholderia cepacia AMMD]
TCCTGTCCGATTGGACAGGT
>Bamb_5967(pydC) Score=6.8 Pos=-188 [Burkholderia cepacia AMMD]
ACCTGTCCAATCGGACAGGA
# TF - FadP: Bamb_2773
>Bamb_3013(nppD) Score=5.5 Pos=-136 [Burkholderia cepacia AMMD]
TCGCACGACCGTTCGT
>Bamb_1894(fadB) Score=5.3 Pos=-116 [Burkholderia cepacia AMMD]
TTGAACGACCGTGCTT
>Bamb_2773(fadP) Score=5.3 Pos=-51 [Burkholderia cepacia AMMD]
TAGTACGGCCGTTCGA
>Bamb_3540 Score=4.8 Pos=-196 [Burkholderia cepacia AMMD]
CAGAACGGCCATTCGA
>Bamb_0938(etfB) Score=5.6 Pos=-144 [Burkholderia cepacia AMMD]
TAGAACGACCGTTCGC
>Bamb_1346(etfD) Score=5.7 Pos=-104 [Burkholderia cepacia AMMD]
TAGAACGATCGTGCTA
>Bamb_0451(fadD1) Score=5.3 Pos=-39 [Burkholderia cepacia AMMD]
TAGCACGACCATTCGA
>Bamb_2271 Score=5.4 Pos=-62 [Burkholderia cepacia AMMD]
TAGCACGATCGTTCAC
>Bamb_2606(fadD2) Score=5.2 Pos=-59 [Burkholderia cepacia AMMD]
TGGCACGATCGTTCGC
# TF - LiuQ: Bamb_4589
>Bamb_4588(liuA) Score=5.4 Pos=-158 [Burkholderia cepacia AMMD]
CTGAGTATCACTCAA
>Bamb_4588(liuA) Score=5.2 Pos=-56 [Burkholderia cepacia AMMD]
TTGAGCGAAACTCAG
>Bamb_4589(liuQ) Score=5.4 Pos=-28 [Burkholderia cepacia AMMD]
TTGAGTGATACTCAG
>Bamb_4589(liuQ) Score=5.2 Pos=-130 [Burkholderia cepacia AMMD]
CTGAGTTTCGCTCAA
# TF - PaaR: Bamb_0243
>Bamb_0448(paaZ) Score=6.4 Pos=-63 [Burkholderia cepacia AMMD]
TCCGACCAACCGGTCGGTTAAT
>Bamb_0449(paaG) Score=6.6 Pos=-88 [Burkholderia cepacia AMMD]
ATTAACCGACCGGTTGGTCGGA
>Bamb_3960(paaH) Score=6.6 Pos=-61 [Burkholderia cepacia AMMD]
ATCTACCGACCGGTCGGTTTAT
>Bamb_0249(paaA) Score=7.1 Pos=-62 [Burkholderia cepacia AMMD]
ATTAACCGACCGGTCGGTTGGT
# RNA - FMN
>Bamb_2742(ribB) Score=97 Pos=-268 [Burkholderia cepacia AMMD]
AGTGCGTCTTCAGGGCGGGGCGAAATTCCCCACCGGCGGTAGGCTGGCGAAAGCCGGCGAGCCCGCGAGCGCCCGCGCAACCGCGCGGGGTCAGCAGATCTGGTCGAATGCCAGAGCCGACGGTCATAGTCCGGATGAGAGAAGATGTGC
# RNA - TPP
>Bamb_0328(thiO) Score=59.1 Pos=-357 [Burkholderia cepacia AMMD]
CGACGAAACAGGGGTGCTTCGAGCGCGGCCGACGGTTCATTCCGGGCGACGCGGCGAGGCTGAGAAAGACCCTTCGCACCCGATCCGGGTAATACCGGCGAGGGAAGTTTCTGATCCCGCCGGGC
>Bamb_1105(thiC) Score=59.4 Pos=-242 [Burkholderia cepacia AMMD]
CTTGCTAACGCGGGGGTCCTGCAATGCGTTCGGTCAAACAAACCGGCATTGCGGGTGAGAAATACCCTTTGAACCTGATCTGGATAATGCCAGCGCAGGGAAGCGTACGATTTCGCCGC
# RNA - Cobalamin
>Bamb_1574(cobG) Score=95.1 Pos=-299 [Burkholderia cepacia AMMD]
CTACGGCCGTTCGTTCGCCGGTGCCCTTCGGGGCCGAAGAGGGAACACAGGGCGCGTATCGCGCTGCTGTGGCTGCCCCCGCAACTGTAGACAGCGAGCCGATCTCCCCCCTCATGCCACTGGTTTCACCGGGAAGGCCGGGAGCCGGCGCCGACCTGTCAGCCAGGAGACCTGCCGGCCTGAAAGTGCGTGCG
>Bamb_1554(cysG) Score=33.8 Pos=-272 [Burkholderia cepacia AMMD]
TATCGTATGCGCCGCGTTCGGTGCTCGCGCGCGCTCCTCCGGCGTGCGCAGTTAAACGGGAAACAGGAGGCGGACGTCCGCCCGGCCTGTGCTGTCCCCGCAACGGTACGCCGCCCGCGCGTCGCGGTTCCCCGCACGCGCCCAGGCCGCCCGCGATGCCACTGCCCTTCAGCGGGCGGGAAGGCTGCGGCCTGGCAAGCGGCCAGCCCGGATACCGGCCGACGCAAGGGGCGAGCCC
>Bamb_3886(btuB1) Score=113.2 Pos=-402 [Burkholderia cepacia AMMD]
TACGCTTGCGCGCTGATGGTTCCCGGGAACGGGATCAAAAGGGAACGCAGGAGAGGCAGCGCCTCGAATCTGCGGCTGCCCCCGCAACTGTAAGCGGCGAATCCGCGCCACCACACGCCACTGGGAAACCGGGAAGGCCGGCGCGAATAACGACCCGCGAGCCAGGAGACCTGCCATCGACCCGAGGTCCAAGCA
>Bamb_4649(bglu_2g19320) Score=37.2 Pos=-177 [Burkholderia cepacia AMMD]
CGGGCCTTCAACACGCGAACGTTCGCGCGTACAATTCGCCCGATACGAGGTGCGGAAGCCGGTGCAAGCCCGGCGCGGTCGCGCCACTGTAACCGCGGATCTTCAATCCCGGAAGCCAGACCTGCCTTCGTATTCCATCCAACA
>Bamb_1556(cobW) Score=37 Pos=-595 [Burkholderia cepacia AMMD]
ACACTCGCACGCGTTTTGGTGCTCGCGCGCGCTCCTCCGGCGCGCGCAGTTAAACGGGAAACAGGGAGCCTGCCTGCGCCGCAGTCGAGCCAACCTGTGCTGCCCCCGCAACGGTAAGCGAACGCGTCGCGCCCAGCGCGACGCAGCGCCGCTTCGCCGCATGCCTGCCGCATGCGGACGACCGCCACTGGATGCCGCGCATTCGGGAAGGCGAAGCGGCGTGTTCGTCAGCCCGGATACCGGCCGAAACGTTGGGGTTCAGCGC
# RNA - SAH_riboswitch
>Bamb_0186(ahcY) Score=47 Pos=-149 [Burkholderia cepacia AMMD]
TTTCCGAGGAGCGTTGCGACGGACCTTCTGCGTCCGCCAGGCTCGGAAAGCTTCACCAAGCAGCCGTGCGGCGAGATTCG
# RNA - Glycine
>Bamb_0133(gcvT) Score=35.1 Pos=-355 [Burkholderia cepacia AMMD]
CCCGCACGCGTCGGGAGAGCGTGTGACCGCGTAGCTAGGAACGCCGGTCGCGCCGCCGAAGGGGCACACCCGCAAACTCTCAGGCAAAAGGACCGACCGCGTCGG
>Bamb_0133(gcvT) Score=29.6 Pos=-219 [Burkholderia cepacia AMMD]
CTCCCCGCACTCTGGAGAGCGGCAGTAGCCCATTGCGCCCATGCGGCGCGGGCAAGCTGCCCACCGAAGGGGCGCGCGTTCGCAGGCTCACGGCCGCAGCGCAATCTCTCAGGTATCGAGGACAGAGGGGCATGG
# RNA - yybP-ykoY
>Bamb_0880(COG2119) Score=42.1 Pos=-137 [Burkholderia cepacia AMMD]
TCCGGCCCTCATTGGGGAGTAGCCGCTCCGCTCGATGTCCCGCGCTTCCGGCGCGCATCGTGACGGAGGCGTCCGTCAACAGACTTGGCCATTCATTCGGCCATGGCGGACGCAGCCACCGAGGCCTGGCGAGACCGATGGTTCACTG
>Bamb_5184(COG0530) Score=56.2 Pos=-260 [Burkholderia cepacia AMMD]
GCCCTTCGTCTTTGGGGAGTAGCCTGCTTTCCATCCCCCGGAAAGCGAACACGTCAACATACTCGGCCTGCGGCCGTGGCGCGTTCGGCCGAATCGGTCTGGCGAGACCATCGACGCATCG
# RNA - mini-ykkC
>Bamb_2320(ykkC) Score=45 Pos=-68 [Burkholderia cepacia AMMD]
CGCCCGGGGACGACCCCGGGTCATTCGATTCAACGGGGACGGCCCC
# RNA - sucA
>Bamb_1390(sucA) Score=80.8 Pos=-86 [Burkholderia cepacia AMMD]
CGCAATCCGCTAAACGGTCAGGCCGTGTCGCGGAAGGTTGAGCAACCCGCTATTTCTCGAGAAGCTCGAAGAAAGGTGAGCGTA
# TF - HrcA: Bamb_0639
>Bamb_2875(rpoH) Score=7.5 Pos=-89 [Burkholderia cepacia AMMD]
TTAGCACTCGGATTCCGGGAGTGCTAA
>Bamb_0732(groS) Score=7.9 Pos=-100 [Burkholderia cepacia AMMD]
TTAGCACTCGCTGCACGAGAGTGCTAA
# TF - NmlR: Bamb_1782
>Bamb_1782(nmlR) Score=6.1 Pos=-37 [Burkholderia cepacia AMMD]
CTTAGAGTGAACTCTAAC
# TF - SoxR: Bamb_4130
>Bamb_3952(PF11811) Score=6.3 Pos=-91 [Burkholderia cepacia AMMD]
ACTTGAAGTTAACTTCAATT
>Bamb_4129 Score=6.7 Pos=-58 [Burkholderia cepacia AMMD]
ACTTGAAGTTAACTTCAACT
>Bamb_4130(soxR) Score=6.7 Pos=-40 [Burkholderia cepacia AMMD]
AGTTGAAGTTAACTTCAAGT
# TF - CueR: Bamb_2255
>Bamb_3036(copZ) Score=5.9 Pos=-64 [Burkholderia cepacia AMMD]
ACCTTCCCACCATGGCAAGCT
# TF - CadR-PbrR: Bamb_0113
>Bamb_0114(cadA) Score=6.1 Pos=-622 [Burkholderia cepacia AMMD]
ACCTTGTAGTGGCTTCAGGGT
# TF - Bphy_4590: Bamb_1342
>Bamb_1342(Bphy_4590) Score=6.7 Pos=-237 [Burkholderia cepacia AMMD]
GAATGTAACCGCTTACATTT
>Bamb_1343(Bphy_4591) Score=6.7 Pos=-21 [Burkholderia cepacia AMMD]
AAATGTAAGCGGTTACATTC
# TF - Bamb_4155: Bamb_4155
>Bamb_4158(Bamb_4158) Score=7.5 Pos=43 [Burkholderia cepacia AMMD]
CGTTGCACACGTGTGCAACG
# TF - PtxS: Bamb_1651
>Bamb_1655(kguE) Score=7.1 Pos=-39 [Burkholderia cepacia AMMD]
AAATGGAACCGGTTCCATTC
>Bamb_3645(gadC) Score=5.8 Pos=-310 [Burkholderia cepacia AMMD]
CAATGGAACCGGTTCTATCT
# TF - Bamb_2736: Bamb_2736
>Bamb_2736(Bamb_2736) Score=6.6 Pos=-51 [Burkholderia cepacia AMMD]
GTTGACGAAATTTCGCCATC
>Bamb_2737(SSF51658) Score=6.3 Pos=-92 [Burkholderia cepacia AMMD]
ATTGGCGATTTTTCGTCAAC
# TF - ScrR: Bamb_3699
>Bamb_3698(sacB) Score=6.3 Pos=-94 [Burkholderia cepacia AMMD]
CGTCCAAACCGGTTTGAAAT
>Bamb_3698(sacB) Score=6.3 Pos=-72 [Burkholderia cepacia AMMD]
CATCCGAACCGGTTTGGACA
>Bamb_3699(scrR) Score=6.3 Pos=-117 [Burkholderia cepacia AMMD]
TGTCCAAACCGGTTCGGATG
>Bamb_3699(scrR) Score=6.3 Pos=-95 [Burkholderia cepacia AMMD]
ATTTCAAACCGGTTTGGACG
# TF - GabR: Bamb_4710, Bamb_3295
>Bamb_4711(gabT) Score=11.9 Pos=-66 [Burkholderia cepacia AMMD]
TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA
>Bamb_3296(gbtA) Score=11.1 Pos=-107 [Burkholderia cepacia AMMD]
GTGGTCC-(16)-ATGGTTC-(9)-GGACCGT
# TF - BPSL1304: Bamb_1118
>Bamb_1118(BPSL1304) Score=6.2 Pos=-29 [Burkholderia cepacia AMMD]
GGTCGAAAACGTTTACATCG
# TF - FdsR: Bamb_0898
>Bamb_0897(fdsG) Score=5.3 Pos=-44 [Burkholderia cepacia AMMD]
ATATGCATTCCTAGCGCATAT
>Bamb_0897(fdsG) Score=6 Pos=-131 [Burkholderia cepacia AMMD]
TTATGCACTCCGATTTCCTAT
>Bamb_0898(fdsR) Score=5.3 Pos=-108 [Burkholderia cepacia AMMD]
ATATGCGCTAGGAATGCATAT
>Bamb_0898(fdsR) Score=6 Pos=-21 [Burkholderia cepacia AMMD]
ATAGGAAATCGGAGTGCATAA
# TF - Bamb_1959: Bamb_1959
>Bamb_1958(Bamb_1958) Score=5.9 Pos=-307 [Burkholderia cepacia AMMD]
ACTTGTTATGACAAGA
>Bamb_1959(Bamb_1959) Score=5.9 Pos=-22 [Burkholderia cepacia AMMD]
TCTTGTCATAACAAGT
# TF - UraR: Bamb_1954
>Bamb_1954(uraR) Score=5.2 Pos=-47 [Burkholderia cepacia AMMD]
ATTGTTGACAAT
>Bamb_1954(uraR) Score=5.2 Pos=-190 [Burkholderia cepacia AMMD]
TTTGTCAACAAA
# TF - UreR: Bamb_0540
>Bamb_0540(ureR) Score=5.7 Pos=-204 [Burkholderia cepacia AMMD]
ACTGGTAAGACCAGT
>Bamb_0540(ureR) Score=4.9 Pos=-29 [Burkholderia cepacia AMMD]
GCCGGTCAGACCGGC
>Bamb_0541(dctA) Score=5.7 Pos=-56 [Burkholderia cepacia AMMD]
ACTGGTCTTACCAGT
>Bamb_0541(dctA) Score=4.9 Pos=-231 [Burkholderia cepacia AMMD]
GCCGGTCTGACCGGC
# TF - PhnR2: Bamb_3197
>Bamb_3195(Bamb_3195) Score=5.2 Pos=-66 [Burkholderia cepacia AMMD]
ATTGTCAACAAT
>Bamb_3194(phnA) Score=5.2 Pos=-114 [Burkholderia cepacia AMMD]
ATTGTTGACAAT
>Bamb_3197(phnR2) Score=5 Pos=-93 [Burkholderia cepacia AMMD]
ACTGTTGACAAT
# TF - MetR: Bamb_4647
>Bamb_4647(metR) Score=5 Pos=-60 [Burkholderia cepacia AMMD]
ATGGCATTATTTCAT
>Bamb_4646(metE) Score=5 Pos=-83 [Burkholderia cepacia AMMD]
ATGAAATAATGCCAT
# TF - EutR: Bamb_6017
>Bamb_6018(eutB) Score=5.5 Pos=-75 [Burkholderia cepacia AMMD]
AATGTACCAGGACATT
>Bamb_6017(eutR) Score=5.6 Pos=-71 [Burkholderia cepacia AMMD]
ATTGCACTAGGACAAT
# TF - PdxW: Bamb_3950, Bamb_5126
>Bamb_5125(PF00583) Score=11.1 Pos=-131 [Burkholderia cepacia AMMD]
CGTGGCTCCAG-(13)-CATGGGTCTAC-(2)-ATGGTGCCACG
>Bamb_3951(PF00583) Score=14.5 Pos=-68 [Burkholderia cepacia AMMD]
CGTGGCACCAT-(13)-TCTGGCGCTTC-(2)-ATGGTACCTCG
# TF - BPSL1086: Bamb_2384
>Bamb_2385(BMA1950) Score=18.8 Pos=-206 [Burkholderia cepacia AMMD]
CAACTGTACCG-(13)-CGATTGTACCG-(0)-TTACTGTGCCG-(8)-GATTACAGTTG
>Bamb_5024(PF01810) Score=17.7 Pos=-102 [Burkholderia cepacia AMMD]
TCCCCGTACCG-(13)-TAACTGTACCG-(0)-GTACTGTACAT-(8)-CGCTAAACTGA
# TF - Bamb_4265: Bamb_4265
>Bamb_4264(COG697) Score=16.6 Pos=-117 [Burkholderia cepacia AMMD]
AACTGTACGGT-(7)-CCAGTACAGTT-(6)-AATTGTATTGG
# TF - Bamb_6386: Bamb_6386
>Bamb_6385(COG1917) Score=10.3 Pos=-89 [Burkholderia cepacia AMMD]
TCTTGGTACA--------------TCCTGGTGCT
>Bamb_6387(PF01966) Score=6.4 Pos=-143 [Burkholderia cepacia AMMD]
CGATGGTGCA--------------TCTTGGGACT
# TF - Bamb_5788: Bamb_5788
>Bamb_5787(PF01370) Score=12.6 Pos=-163 [Burkholderia cepacia AMMD]
GTATGGACCAGT-(12)-TCTTGGCACTTA-(3)-GATAGGACATGA
# TF - SdhR: Bamb_3310
>Bamb_5692(acnB) Score=6 Pos=-150 [Burkholderia cepacia AMMD]
CCCCAACTCTTATATAAGACATAAGA
>Bamb_2572(icd) Score=7.1 Pos=-184 [Burkholderia cepacia AMMD]
TCATCTGTCTTATATAAGACATAAGG
>Bamb_3309(mdh) Score=7.4 Pos=-245 [Burkholderia cepacia AMMD]
ACATCTGTCTTATATAAGACATATGA
>Bamb_3310(sdhR) Score=7.4 Pos=-69 [Burkholderia cepacia AMMD]
TCATATGTCTTATATAAGACAGATGT
>Bamb_3879(aceA) Score=6 Pos=-135 [Burkholderia cepacia AMMD]
TCTTATGTCTTATATAAGAGTTGGTC
# TF - PdxW2: Bamb_4617
>Bamb_4616(pdxO2) Score=11.7 Pos=-125 [Burkholderia cepacia AMMD]
TCTGGTCT-(16)-ACCGGCTC-(8)-AAACCAGT
# TF - BPSS1200: Bamb_3694
>Bamb_3693(PF02627) Score=12.5 Pos=-107 [Burkholderia cepacia AMMD]
ACTGGTTAC-(15)-ATTGGCCAT-(5)-CAGGCCAGT
# TF - BPSS0970: Bamb_4005
>Bamb_4006(fdhA2) Score=9.5 Pos=-91 [Burkholderia cepacia AMMD]
AACTGTACTCTTTTT----------AGGTGTACACACAGC
# TF - YdcR: Bamb_4500, Bamb_3927
>Bamb_4499(COG0823) Score=8.8 Pos=-192 [Burkholderia cepacia AMMD]
TGCTGATCCGCACGT---------CTCTGATCCTTTTCT
>Bamb_3929(cysI) Score=9.4 Pos=-143 [Burkholderia cepacia AMMD]
ATCTGCTGCGCCCTT---------ATCTGCTGCTTGTCC
>Bamb_5419(PF11174) Score=6.9 Pos=-94 [Burkholderia cepacia AMMD]
CCGTGCTGCGCAAAA---------AACTGCTTCTTTTTC
# TF - Bamb_3558: Bamb_3558
>Bamb_3557 Score=23.2 Pos=-170 [Burkholderia cepacia AMMD]
CCAGATACAGATTC-(11)-ACCGATACAGCAGG-(17)-ACCGCAACAGATTC-(9)-GAATCTGTCCGGCC
# TF - UxuR2: Bamb_1229
>Bamb_1228(mglA) Score=4 Pos=-129 [Burkholderia cepacia AMMD]
CCATTGGTATGGTCACTTC
>Bamb_1228(mglA) Score=5.4 Pos=-100 [Burkholderia cepacia AMMD]
CAATTGGCTTGACCAGATG
>Bamb_1228(mglA) Score=5.6 Pos=-57 [Burkholderia cepacia AMMD]
CAACTGGACTGGCCAGTTG
>Bamb_1229(uxuR2) Score=4 Pos=-84 [Burkholderia cepacia AMMD]
GAAGTGACCATACCAATGG
>Bamb_1229(uxuR2) Score=5.4 Pos=-113 [Burkholderia cepacia AMMD]
CATCTGGTCAAGCCAATTG
>Bamb_1229(uxuR2) Score=5.6 Pos=-156 [Burkholderia cepacia AMMD]
CAACTGGCCAGTCCAGTTG
# TF - Bcep18194_B0628: Bamb_4443
>Bamb_4451(Bamb_4451) Score=5.3 Pos=-67 [Burkholderia cepacia AMMD]
ATTGGTTGGACCTTT
# TF - EutR: Bamb_4138
>Bamb_4138(eutR) Score=5 Pos=-167 [Burkholderia cepacia AMMD]
AATGTTTGTTTTATTACACA
>Bamb_4137(PF01019) Score=5 Pos=-188 [Burkholderia cepacia AMMD]
TGTGTAATAAAACAAACATT
>Bamb_4137(PF01019) Score=5.5 Pos=-70 [Burkholderia cepacia AMMD]
AATGTACTGTTCATTACATG
# TF - GguR: Bamb_1043
>Bamb_4676(kdgD) Score=4.9 Pos=-207 [Burkholderia cepacia AMMD]
TAGTCATCATACGACAT
>Bamb_4676(kdgD) Score=4.8 Pos=-102 [Burkholderia cepacia AMMD]
TCGTTGTACGATGACAT
>Bamb_4680(gudP) Score=4.1 Pos=-140 [Burkholderia cepacia AMMD]
ATGTCTGCCGACGACAT
>Bamb_2220(gguT) Score=5.3 Pos=-86 [Burkholderia cepacia AMMD]
ATGTCATACGACGACAT
>Bamb_6123(uxuP) Score=4.7 Pos=-341 [Burkholderia cepacia AMMD]
CAGTCATCCTATGACGA
>Bamb_1041(gudD) Score=5.2 Pos=-270 [Burkholderia cepacia AMMD]
AAGTCATCCGACGACTG
>Bamb_4679(kgsD) Score=5.2 Pos=-240 [Burkholderia cepacia AMMD]
ACGTCGTCGTATGACAT
>Bamb_1043(gguR) Score=5.2 Pos=-107 [Burkholderia cepacia AMMD]
CAGTCGTCGGATGACTT
>Bamb_4675(garD) Score=4.9 Pos=-48 [Burkholderia cepacia AMMD]
ATGTCGTATGATGACTA
>Bamb_4675(garD) Score=4.8 Pos=-153 [Burkholderia cepacia AMMD]
ATGTCATCGTACAACGA
>Bamb_4904(pgl) Score=4.6 Pos=-73 [Burkholderia cepacia AMMD]
ATGTAGTACGACGACGT
>Bamb_4679(kgsD) Score=4.1 Pos=-71 [Burkholderia cepacia AMMD]
ATGTCGTCGGCAGACAT
>Bamb_3566(exuT) Score=4.9 Pos=-106 [Burkholderia cepacia AMMD]
CAGTCGTCAGATAACGT
# TF - UdhR: Bamb_5235
>Bamb_5236(udh) Score=6.7 Pos=-86 [Burkholderia cepacia AMMD]
TTGGAAAACGTTTTCCGA
>Bamb_5235(udhR) Score=6.7 Pos=-157 [Burkholderia cepacia AMMD]
TCGGAAAACGTTTTCCAA
>Bamb_5234(exuT) Score=6.2 Pos=-144 [Burkholderia cepacia AMMD]
TTGAAAAACGTTTTCCAT