# TF - RutR2: PFL_2545
>PFL_2548(pydB) Score=6.5 Pos=-94 [Pseudomonas fluorescens Pf-5]
TCCTGTCACCGATGACAGGA
>PFL_2549(pydP) Score=6.6 Pos=-547 [Pseudomonas fluorescens Pf-5]
TCCTGTCATCGGTGACAGGA
# TF - PhhR: PFL_1612
>PFL_1612(phhR) Score=5.5 Pos=-194 [Pseudomonas fluorescens Pf-5]
TTGTAAAGTAAACGTTACGA
>PFL_1612(phhR) Score=5.3 Pos=-120 [Pseudomonas fluorescens Pf-5]
CTGTCACATAATCTTGACGA
>PFL_1611(phhA) Score=5.3 Pos=-207 [Pseudomonas fluorescens Pf-5]
TCGTCAAGATTATGTGACAG
>PFL_1611(phhA) Score=5.5 Pos=-133 [Pseudomonas fluorescens Pf-5]
TCGTAACGTTTACTTTACAA
# TF - HexR: PFL_4611
>PFL_4622(edd) Score=7 Pos=-138 [Pseudomonas fluorescens Pf-5]
ATtTTGT-------ACAACga
>PFL_4610(zwf) Score=7.8 Pos=-85 [Pseudomonas fluorescens Pf-5]
ATGTTGT-------ACTACAT
>PFL_4622(edd) Score=7.5 Pos=-201 [Pseudomonas fluorescens Pf-5]
TTGTTGT-------ACAAGAT
>PFL_4611(hexR) Score=7.8 Pos=-239 [Pseudomonas fluorescens Pf-5]
ATGTAGT-------ACAACAT
>PFL_4623(gapA) Score=7 Pos=-105 [Pseudomonas fluorescens Pf-5]
TCGTTGT-------ACAAAAT
>PFL_4623(gapA) Score=7.5 Pos=-43 [Pseudomonas fluorescens Pf-5]
ATCTTGT-------ACAACAA
# TF - DesT: PFL_0610
>PFL_1737(fabA) Score=5.9 Pos=-150 [Pseudomonas fluorescens Pf-5]
AGTGCACAAGTGTACATT
>PFL_1839(plsC) Score=5.4 Pos=-51 [Pseudomonas fluorescens Pf-5]
AGTGCACATCCGTACACT
# TF - HexR1: PFL_6160
>PFL_6160(hexR1) Score=6.2 Pos=-63 [Pseudomonas fluorescens Pf-5]
CTGTAGTATAACTACAA
>PFL_0509(aceE) Score=5.4 Pos=-178 [Pseudomonas fluorescens Pf-5]
CTGTAGTTTTACTACTC
>PFL_0509(aceE) Score=6.2 Pos=-126 [Pseudomonas fluorescens Pf-5]
TTGTAGTAAAACTACAC
# TF - BirA: PFL_5601
>PFL_5693(bioB) Score=8.8 Pos=-128 [Pseudomonas fluorescens Pf-5]
ATGTAAACC---------------GGTTGACAG
>PFL_5694(COG1040) Score=8.8 Pos=5 [Pseudomonas fluorescens Pf-5]
CTGTCAACC---------------GGTTTACAT
# TF - NrtR: PFL_2464
>PFL_2466(pncA) Score=5.5 Pos=-48 [Pseudomonas fluorescens Pf-5]
AAAGTACATGACATATACTTT
>PFL_2465(nadD) Score=5.4 Pos=-35 [Pseudomonas fluorescens Pf-5]
AAGGTACACGTCATGTACCAA
>PFL_2465(nadD) Score=5.5 Pos=-156 [Pseudomonas fluorescens Pf-5]
AAAGTATATGTCATGTACTTT
>PFL_2466(pncA) Score=5.4 Pos=-169 [Pseudomonas fluorescens Pf-5]
TTGGTACATGACGTGTACCTT
# TF - NrdR: PFL_5523
>PFL_1942(topA) Score=5.7 Pos=-72 [Pseudomonas fluorescens Pf-5]
CCACTATATATAGCGG
>PFL_4524(nrdB) Score=4.1 Pos=-434 [Pseudomonas fluorescens Pf-5]
ACACAACATCTAGTAA
>PFL_4476(nrdA) Score=4.6 Pos=-375 [Pseudomonas fluorescens Pf-5]
TCCCTATATCTAGGGT
# TF - SahR: PFL_5787
>PFL_5787(sahR) Score=7.2 Pos=-35 [Pseudomonas fluorescens Pf-5]
ATATCAAAACTTTTTGATAT
# TF - Zur: PFL_0078
>PFL_0079(znuA) Score=4.6 Pos=-36 [Pseudomonas fluorescens Pf-5]
GAGACGTTATTATGTTACCCGTT
>PFL_0078(zur) Score=3.7 Pos=-44 [Pseudomonas fluorescens Pf-5]
AACGGGTAACATAATAACGTCTC
>PFL_4912(omr) Score=5.2 Pos=-113 [Pseudomonas fluorescens Pf-5]
GAGATGTTATATTGTATCAATCA
>PFL_6174(dksA2) Score=5.9 Pos=-48 [Pseudomonas fluorescens Pf-5]
GTGTTGTTATAATATAACATAAA
>PFL_6175(PA5537) Score=5.4 Pos=-96 [Pseudomonas fluorescens Pf-5]
TTTATGTTATATTATAACAACAC
>PFL_6177(folE2) Score=5.1 Pos=-50 [Pseudomonas fluorescens Pf-5]
GCATTGTTATAATATAACATGTG
>PFL_4896(rpmE2) Score=5.3 Pos=-51 [Pseudomonas fluorescens Pf-5]
GATATGTTATTGTATAACGCATC
>PFL_6176(amiA) Score=5.6 Pos=-102 [Pseudomonas fluorescens Pf-5]
CACATGTTATATTATAACAATGC
>PFL_5528(zbp) Score=5.5 Pos=-54 [Pseudomonas fluorescens Pf-5]
CGATTGTTATAAGATCACATAAC
>PFL_3806(rpmJ) Score=4.8 Pos=-47 [Pseudomonas fluorescens Pf-5]
AATATGATATGTTATTACATTAG
# TF - LldR: PFL_0818
>PFL_0817(lldP) Score=6.5 Pos=-68 [Pseudomonas fluorescens Pf-5]
AATTGGTCTTACCAATT
>PFL_0818(lldR) Score=6.1 Pos=-210 [Pseudomonas fluorescens Pf-5]
AATTGGTAAGACCAATT
# TF - NorR: PFL_5041
>PFL_5041(norR) Score=5.9 Pos=-10 [Pseudomonas fluorescens Pf-5]
TGGAGTCATTATGACTGCA
>PFL_5041(norR) Score=4.9 Pos=-55 [Pseudomonas fluorescens Pf-5]
TATAGTCATAAAGACACTC
>PFL_5041(norR) Score=5.3 Pos=-29 [Pseudomonas fluorescens Pf-5]
TATAGTCATTAAGACACCA
>PFL_5040(hmp) Score=5.9 Pos=-165 [Pseudomonas fluorescens Pf-5]
TGCAGTCATAATGACTCCA
>PFL_5040(hmp) Score=5.3 Pos=-146 [Pseudomonas fluorescens Pf-5]
TGGTGTCTTAATGACTATA
>PFL_5040(hmp) Score=4.9 Pos=-120 [Pseudomonas fluorescens Pf-5]
GAGTGTCTTTATGACTATA
>PFL_3310 Score=5.5 Pos=-157 [Pseudomonas fluorescens Pf-5]
TGCAGTCATATTGACTGCG
>PFL_3310 Score=4.9 Pos=-136 [Pseudomonas fluorescens Pf-5]
GGCGGTCTTTATGACTTCT
>PFL_3310 Score=4.7 Pos=-111 [Pseudomonas fluorescens Pf-5]
TCTGGTCATAAAGACTCTT
# TF - PrpR: PFL_1860
>PFL_1860(prpR) Score=4.8 Pos=-12 [Pseudomonas fluorescens Pf-5]
GGTGTCGACAAT
>PFL_1860(prpR) Score=5.8 Pos=-85 [Pseudomonas fluorescens Pf-5]
ATTGTCGACAAT
>PFL_2633(acnB) Score=4.4 Pos=-113 [Pseudomonas fluorescens Pf-5]
ATTGTCGGTAAT
# TF - HutC: PFL_0399
>PFL_0398(hutF) Score=5.4 Pos=-42 [Pseudomonas fluorescens Pf-5]
GTATATGTATATACAAATAA
>PFL_0401(hutU) Score=6.1 Pos=-86 [Pseudomonas fluorescens Pf-5]
ATGCTTGTATGTACAAGTAA
>PFL_0401(hutU) Score=4.6 Pos=-96 [Pseudomonas fluorescens Pf-5]
TTGATTGCATATGCTTGTAT
>PFL_0399(hutC) Score=5.4 Pos=-85 [Pseudomonas fluorescens Pf-5]
TTATTTGTATATACATATAC
# TF - IscR: PFL_4966
>PFL_4966(iscR) Score=7 Pos=-66 [Pseudomonas fluorescens Pf-5]
ATAGTTGACCTGATTACTCGGGTAT
>PFL_5610(erpA) Score=6.7 Pos=-81 [Pseudomonas fluorescens Pf-5]
ATAGTTGACCGCTTTTCTGGGAGAA
# TF - NagQ: PFL_1082
>PFL_1082(nagQ) Score=4.6 Pos=-86 [Pseudomonas fluorescens Pf-5]
TGGCGTTGACATGGTATC
>PFL_1082(nagQ) Score=5.5 Pos=-75 [Pseudomonas fluorescens Pf-5]
TGGTATCTAAGTGGTATT
# TF - GlcC: PFL_2270
>PFL_2269(glcD) Score=4.3 Pos=-222 [Pseudomonas fluorescens Pf-5]
CACTGGTATGACCAGCC
>PFL_2269(glcD) Score=4.6 Pos=-115 [Pseudomonas fluorescens Pf-5]
AAGTGGTTCGACCACTG
>PFL_2270(glcC) Score=4 Pos=-133 [Pseudomonas fluorescens Pf-5]
CAGTGGTCGAACCACTT
>PFL_2270(glcC) Score=5.5 Pos=-26 [Pseudomonas fluorescens Pf-5]
GGCTGGTCATACCAGTG
# TF - NtrC: PFL_0377
>PFL_6139(alsT) Score=4.8 Pos=-210 [Pseudomonas fluorescens Pf-5]
CGCACCGGTATAGTGCG
>PFL_4230(amtB2) Score=4.6 Pos=-54 [Pseudomonas fluorescens Pf-5]
CGCGCCAAAACGGTTCA
>PFL_2518(ybdK) Score=4.5 Pos=-283 [Pseudomonas fluorescens Pf-5]
TGCACCGATTCTGTTCG
>PFL_0386(glnA) Score=4.5 Pos=-235 [Pseudomonas fluorescens Pf-5]
TGCACCAAAACGGGTCA
>PFL_0378(ntrB) Score=5.4 Pos=-246 [Pseudomonas fluorescens Pf-5]
TGCACTATATTGGTGCA
>PFL_6020(glnK) Score=4.5 Pos=-347 [Pseudomonas fluorescens Pf-5]
TGCACGTTTTTCGCGCA
>PFL_6020(glnK) Score=5.3 Pos=-314 [Pseudomonas fluorescens Pf-5]
CGCACCGTTTTTGTGCG
# TF - FruR: PFL_0858
>PFL_0858(fruR) Score=4.8 Pos=-160 [Pseudomonas fluorescens Pf-5]
GCTGAAACGTTTAATC
>PFL_0859(fruB) Score=4.5 Pos=-157 [Pseudomonas fluorescens Pf-5]
GATTAAACGTTTCAGC
# TF - RbsR: PFL_2104
>PFL_2101(rbsB) Score=6.3 Pos=-140 [Pseudomonas fluorescens Pf-5]
TTACGCAAACGTTTGCGCGG
# TF - ModE: PFL_5695
>PFL_3412(modA) Score=6.4 Pos=-101 [Pseudomonas fluorescens Pf-5]
CGCTATATATTCCGCTATATAGCG
# TF - LexA: PFL_1949
>PFL_0825(recN) Score=5.9 Pos=-41 [Pseudomonas fluorescens Pf-5]
ACTGTATAAATAACCAGA
>PFL_1949(lexA) Score=5.5 Pos=-46 [Pseudomonas fluorescens Pf-5]
ACTGTATATAATCCCAGT
>PFL_1949(lexA) Score=5.7 Pos=-27 [Pseudomonas fluorescens Pf-5]
ACTGTATAAAAAGACAGA
>PFL_0975(PF07130) Score=5.3 Pos=-111 [Pseudomonas fluorescens Pf-5]
CCTGTATATAGATACAGT
>PFL_1279(dinG) Score=5.2 Pos=-39 [Pseudomonas fluorescens Pf-5]
ACTGAAAATTTATCCAGC
>PFL_4225(PFL_4225) Score=5.8 Pos=-35 [Pseudomonas fluorescens Pf-5]
ACTGTATGCATATACAGC
>PFL_0975(yebG) Score=5.3 Pos=-111 [Pseudomonas fluorescens Pf-5]
CCTGTATATAGATACAGT
>PFL_1231(recA) Score=4.8 Pos=-57 [Pseudomonas fluorescens Pf-5]
ACTGGCTACTTATACAGG
>PFL_0057(PF04055) Score=5.5 Pos=-32 [Pseudomonas fluorescens Pf-5]
ACTGTATGTGCATACAGT
>PFL_2524(PSEEN2356) Score=6 Pos=-32 [Pseudomonas fluorescens Pf-5]
ACTGTATATAAAAACAGT
>PFL_3199(PF08774) Score=5.4 Pos=-37 [Pseudomonas fluorescens Pf-5]
TCTGTATGCATAACCAGT
>PFL_2098(PF07867) Score=5.3 Pos=-5 [Pseudomonas fluorescens Pf-5]
ACTGTATGCACGTACAGC
>PFL_4691(umuD) Score=5.2 Pos=-9 [Pseudomonas fluorescens Pf-5]
ACTGTATTTTTGTACAGT
# TF - LiuR: PFL_3933
>PFL_3935(aacS) Score=6 Pos=-115 [Pseudomonas fluorescens Pf-5]
CTTTACGTAAACGTCAAC
>PFL_3935(aacS) Score=6.5 Pos=-158 [Pseudomonas fluorescens Pf-5]
CTTTACGTTAACGTAAAC
>PFL_3933(liuR) Score=5.5 Pos=-59 [Pseudomonas fluorescens Pf-5]
CTTGACGTATACGTCAAC
>PFL_3936(liuA) Score=6.5 Pos=-88 [Pseudomonas fluorescens Pf-5]
GTTTACGTTAACGTAAAG
>PFL_3936(liuA) Score=6 Pos=-131 [Pseudomonas fluorescens Pf-5]
GTTGACGTTTACGTAAAG
# TF - PsrA: PFL_1950
>PFL_1950(psrA) Score=4.7 Pos=-45 [Pseudomonas fluorescens Pf-5]
CCTGAAACGTATGTTTCAAA
>PFL_1950(psrA) Score=5.8 Pos=-32 [Pseudomonas fluorescens Pf-5]
TTTCAAACAAGTGTTTGTCA
>PFL_1826 Score=4.5 Pos=-76 [Pseudomonas fluorescens Pf-5]
TTTTAAACGGCTGTTTTAGC
>PFL_1940(fadB) Score=5.7 Pos=-180 [Pseudomonas fluorescens Pf-5]
AATCAAACGGGCGTATGAAA
>PFL_1819(etfB) Score=5.6 Pos=-393 [Pseudomonas fluorescens Pf-5]
ATACAAACGTTTGTTTGAAT
>PFL_3668 Score=5.7 Pos=-88 [Pseudomonas fluorescens Pf-5]
TTTCAAACAAGCGTATGTTT
>PFL_1818(etfD) Score=5.9 Pos=-176 [Pseudomonas fluorescens Pf-5]
ATTCAAACAAACGTTTGTAT
>PFL_1207(rpoS) Score=5.1 Pos=-429 [Pseudomonas fluorescens Pf-5]
CTTCAAACGGTAGTTTGAAT
>PFL_5997(algQ) Score=5.1 Pos=-183 [Pseudomonas fluorescens Pf-5]
GATTAAACGCTTGTATGAAC
>PFL_5687(acdH1) Score=5.7 Pos=-78 [Pseudomonas fluorescens Pf-5]
TTTCAAACAACTGTTTGACC
# TF - RutR: PFL_0730
>PFL_4366(COG0726) Score=5.7 Pos=-189 [Pseudomonas fluorescens Pf-5]
AGCTGACCATCCAGGCAAGT
>PFL_0731(pbuT) Score=5.3 Pos=-22 [Pseudomonas fluorescens Pf-5]
ACCTGAGCACCTGGACAGCT
>PFL_4372(tsx) Score=5.4 Pos=-253 [Pseudomonas fluorescens Pf-5]
ACCTGACCCAAGAGCCAACT
>PFL_0728(ppuA) Score=5.4 Pos=-22 [Pseudomonas fluorescens Pf-5]
TCCTGACCCACTGGCCAGGA
# TF - VanR: PFL_3473
>PFL_3480(vanK) Score=4.8 Pos=-203 [Pseudomonas fluorescens Pf-5]
TGTGGATCCATT
>PFL_3471(vanA) Score=5.3 Pos=-44 [Pseudomonas fluorescens Pf-5]
AATGGATCCATT
>PFL_3471(vanA) Score=5 Pos=-150 [Pseudomonas fluorescens Pf-5]
AATGGATCCATA
>PFL_3471(vanA) Score=4.7 Pos=-128 [Pseudomonas fluorescens Pf-5]
ACTGGATCCAAA
# TF - PhnR: PFL_4386
>PFL_4386(phnR) Score=4.1 Pos=-305 [Pseudomonas fluorescens Pf-5]
TGGTCTAGGTCA
>PFL_4386(phnR) Score=5.3 Pos=-26 [Pseudomonas fluorescens Pf-5]
TGGTCTAGTCCA
>PFL_4387(phnS) Score=5.4 Pos=-348 [Pseudomonas fluorescens Pf-5]
TGGACTAGACCA
>PFL_4387(phnS) Score=5.3 Pos=-69 [Pseudomonas fluorescens Pf-5]
TGACCTAGACCA
# TF - RutR3: PFL_2447
>PFL_1889(xdhA) Score=5.1 Pos=-76 [Pseudomonas fluorescens Pf-5]
CATTGACCGAAAAGTCAGAC
>PFL_1889(xdhA) Score=4.7 Pos=-99 [Pseudomonas fluorescens Pf-5]
TCCTGACCTTGAAGTCAGAA
>PFL_4364(pbuT) Score=5.2 Pos=-114 [Pseudomonas fluorescens Pf-5]
TCTTGACCCACAGGTCAACA
# RNA - yybP-ykoY
>PFL_2642(COG1971) Score=53.7 Pos=-175 [Pseudomonas fluorescens Pf-5]
CGCGCCTCTTTGGGGAGTAGCCTGCCACCGCGCCCTGCGGTGGCGCCCGTATCAACATTCTCGGCAACCTGCCGTGGTACGGGCACCGTTTCGGTTGGTGAGACCATCGACATACCTGC
>PFL_5123(COG2119) Score=44.8 Pos=-210 [Pseudomonas fluorescens Pf-5]
GCTCCGTCCTAGGGGAGTAGTCTCCCACGAGCGCCACGCTCGTCCGGCATGCGTCAACATACTTGGTCAACAGACCATGGCGCATGCGACCCAAGAGTCCGCACAGACGGACCGCAGGGTTTGACAAGACCTATGACACGCACAC
# RNA - TPP
>PFL_0538(thiC) Score=86.4 Pos=-267 [Pseudomonas fluorescens Pf-5]
GGTTCTTGTCGGGGTGCCTTGCTATGAGGCTGAGATCGGATAATCCGGATCCCGTTGAACCTGATCAGGTTAGCGCCTGCGTAGGGAACAAGATTTCTCGTCACCC
# RNA - SAH_riboswitch
>PFL_5798(ahcY) Score=58.8 Pos=-127 [Pseudomonas fluorescens Pf-5]
TGTCCGAGGGGCGCTGCAGCAGGCATGACCTGTCAGGCTCGGATGGGGCGTTGTTGGTACAGGGCTCCCTGTATGGACACTAAACGCACAACGGCGCCCATTCGCACA
# RNA - mini-ykkC
>PFL_4408(ykkC1) Score=42.9 Pos=-71 [Pseudomonas fluorescens Pf-5]
CGCGAGGACGACCTCGCGACTCATTCGAGCGATCAATTCCGGGGACGACCCCATC
# RNA - S15
>PFL_0847(rpsO) Score=50.8 Pos=-45 [Pseudomonas fluorescens Pf-5]
GTTGAAACTGTTCTTGAACAGTTTCCTGATATAAGGATTGCCCACATGGCACTCAGCGTTGAAGAAAAAGCTCAGATCGTAACCGACTACCAGCAAGCTGTTGG
# RNA - Cobalamin
>PFL_3655 Score=94.9 Pos=-98 [Pseudomonas fluorescens Pf-5]
CGTAGCCTTGCGCTTTCGAGGTTCTTCGGCCACGGGTCGAAGCTAAGAAGGGAACGCGGTCGATGCCGCGGCTGCCCCCGCAACTGTGAAGGGTTCGATTGCTGCAAGGCCACTGCATGGGCGTCGACGACGCCGGTGGGAAGGCGCAGCAATCGCCGGTCCGACGACTGGCAAGCCCTCAGCCAGGAGACCTGCCTCGATCCCAGATTCTCAC
>PFL_2240(btuB2) Score=126.2 Pos=-189 [Pseudomonas fluorescens Pf-5]
CATATGCCGCCCAGTTTCAGGTGCCTCCTGCCGCCGTGCAGGAGGTGAAACGGGAAACCGGTGCGCCCCTTTTCGGGCAAGTCCGGTGCTGCCCCCGCAACGGTAAGCGAGTGCTGCATTCAACAGGCCACTGTACCCAAGGTATGGGAAGGCGAATGCCGCCAGACTCGCAAGCCCGGAGACCGGCCTGTGACGTCTGTTTGGCA
>PFL_4431(btuR) Score=105.6 Pos=-315 [Pseudomonas fluorescens Pf-5]
ACCTTCGCGACTTGTTTCAGGTGCTCTGTGGCCCGTGGCCGACAGAGTGAAACAGGGAAGCCGGTCAGGGTCTGTTCCAGTGATGGAGCCGACGACGATTCCGGCGCTGCCCCCGCAACGGTAGATGAGTCAAGACTGCGCCTGACGCCACTGTGTCAATGACACGGGAAGGCGCGCAGTCCGGCAGCCATGCCGCTCATGAGCCCGGAGACCGGCCTGATCCATCCAACGGCAT
>PFL_3656(cbtB) Score=105.3 Pos=-156 [Pseudomonas fluorescens Pf-5]
CTACACACCTTGTTACGGGTGCCCCTTACAGGGTGAAACGGGAAACCGGTGAATCACGTGCTTAACTAAAAAGCCGTGGCCAGTCCGGTGCTGCCCCCGCAACGGTAAGCGAGCGAAGTGTCAGATCCACTGTGCCAAGGCATGGGAAGGCGACACTTGCTGGCACGGCATGACACAGCCCTGCCCCTCGCAAGCCCGGAGACCGGCCCGCAACACTTACATAACAAC
>PFL_2970(btuB) Score=123 Pos=-154 [Pseudomonas fluorescens Pf-5]
CATATGCGCGCCAGTTTCAGGTGTCCCATGCCGCCGTGCATGGGGTTAAACGGGAAGCCGGTGCGTCATTTCGATGATCAGTCCGGCGCTGCCCCCGCAACGGTAAGCGAGCGAAGCATTCGACAGACCACTGTGCCAAGGCATGGGAAGGTGAATGCCTCATGACCCTCGCAAGCCCGGAGACCGGCCTGCAACTTCGTTTGACAA
# RNA - FMN
>PFL_4508(ribH2) Score=104.6 Pos=-291 [Pseudomonas fluorescens Pf-5]
AACGTTCTCAGGGCGGGGTGCAATTCCCCACCGGCGGTAATTGCGTGCAATGCGCATAGCCCGCGAGCGCTTGGCGAGACCGGTGGCTTGGCCACAGGTGACGACAAGGTCAGCAGACCCGGTGTGATTCCGGGGCCGACGGTCATAGTCCGGATGAAGAGAGAACGGGATT
# TF - PA2100: PFL_1867
>PFL_1866(COG697 (RhaT)) Score=13.7 Pos=-128 [Pseudomonas fluorescens Pf-5]
ATTGACAC-(1)-GTGTCAAT-(6)-TTTGACAG
# TF - PP0486: PFL_4913
>PFL_4914(benE) Score=6.5 Pos=-1 [Pseudomonas fluorescens Pf-5]
ATTGAATCGATTCAAT
>PFL_4913 Score=4.7 Pos=-277 [Pseudomonas fluorescens Pf-5]
ATTGAGTCGATTGTGT
>PFL_4913 Score=6.5 Pos=-234 [Pseudomonas fluorescens Pf-5]
ATTGAATCGATTCAAT
# TF - GntR: PFL_4581
>PFL_4580(gntK) Score=5.6 Pos=-185 [Pseudomonas fluorescens Pf-5]
CTAAGGTAGCGCTGTCCTGA
>PFL_4580(gntK) Score=5.5 Pos=-34 [Pseudomonas fluorescens Pf-5]
CGAAGGTAGCGCTGTCTGCG
>PFL_4581(gntR) Score=5.5 Pos=-201 [Pseudomonas fluorescens Pf-5]
CGCAGACAGCGCTACCTTCG
>PFL_4581(gntR) Score=5.6 Pos=-50 [Pseudomonas fluorescens Pf-5]
TCAGGACAGCGCTACCTTAG
>PFL_4579(gntT) Score=5.5 Pos=-72 [Pseudomonas fluorescens Pf-5]
AAAAGGTAGCGCTATCCCAC
# TF - SoxR: PFL_4160
>PFL_4160(soxR) Score=6.1 Pos=-50 [Pseudomonas fluorescens Pf-5]
ACCTCTAGTTAAGTCAAGGT
>PFL_4159(PF03992) Score=6.1 Pos=-78 [Pseudomonas fluorescens Pf-5]
ACCTTGACTTAACTAGAGGT
# TF - CueR: PFL_0709
>PFL_0712(copZ) Score=5.5 Pos=-56 [Pseudomonas fluorescens Pf-5]
ACCTTGCCACGGTGGCAAGGA
>PFL_0710(copA) Score=5.3 Pos=-56 [Pseudomonas fluorescens Pf-5]
ACCTTGCCTGCGTGGCAAGGT
# TF - CadR-PbrR: PFL_5893
>PFL_3147(czcR) Score=5.8 Pos=-71 [Pseudomonas fluorescens Pf-5]
ACCCTATAGCTACTACAGACT
# TF - PFL_0254: PFL_0254
>PFL_0254(PFL_0254) Score=6.8 Pos=-105 [Pseudomonas fluorescens Pf-5]
CTTTGTTAGCGCTAACATCG
>PFL_0255(omp) Score=6.8 Pos=-24 [Pseudomonas fluorescens Pf-5]
CGATGTTAGCGCTAACAAAG
# TF - PtxS: PFL_2721
>PFL_2721(ptxS) Score=6.5 Pos=-59 [Pseudomonas fluorescens Pf-5]
TCCTGAAACCGGTTTCAGCG
>PFL_2720(kguE) Score=6.5 Pos=-2 [Pseudomonas fluorescens Pf-5]
AAATGAAACCGGTTTCAGAG
# TF - ScrR: PFL_3236
>PFL_3238(cscB) Score=5.6 Pos=-42 [Pseudomonas fluorescens Pf-5]
CGATGTTAACGTTAACCTAA
>PFL_3239(scrY) Score=5.6 Pos=-185 [Pseudomonas fluorescens Pf-5]
TTAGGTTAACGTTAACATCG
# TF - PSPTO5027: PFL_4301
>PFL_4301(PSPTO5027) Score=5.5 Pos=-27 [Pseudomonas fluorescens Pf-5]
AATTGTTGAACAATC
# TF - TreR: PFL_4935
>PFL_4935(treR) Score=5.1 Pos=-150 [Pseudomonas fluorescens Pf-5]
AACTCGTACAGACGAGTT
>PFL_4934(treP) Score=4.7 Pos=-71 [Pseudomonas fluorescens Pf-5]
AACTCGTACAGACGAGTA
>PFL_4934(treP) Score=5.1 Pos=-97 [Pseudomonas fluorescens Pf-5]
AACTCGTCTGTACGAGTT
>PFL_4935(treR) Score=4.7 Pos=-176 [Pseudomonas fluorescens Pf-5]
TACTCGTCTGTACGAGTT
# TF - SdaR: PFL_2433
>PFL_2433(sdaR) Score=4.9 Pos=-40 [Pseudomonas fluorescens Pf-5]
CTATTGTCTGACAACCT
>PFL_2432(COG579) Score=5.2 Pos=-61 [Pseudomonas fluorescens Pf-5]
AGTTAGTCTGACAACCT
# TF - PA1520: PFL_1883
>PFL_1701(gcl) Score=4.7 Pos=-175 [Pseudomonas fluorescens Pf-5]
TTGTATACAA
>PFL_1701(gcl) Score=4.7 Pos=-36 [Pseudomonas fluorescens Pf-5]
TTGTATACAA
>PFL_4366(PA1517) Score=4.7 Pos=-96 [Pseudomonas fluorescens Pf-5]
TTGTATACAA
>PFL_1853(PA0476) Score=4.6 Pos=-428 [Pseudomonas fluorescens Pf-5]
CTGTACACAA
>PFL_1853(PA0476) Score=4.7 Pos=-168 [Pseudomonas fluorescens Pf-5]
TTGTATACAA
>PFL_2039(PA2938) Score=4.1 Pos=12 [Pseudomonas fluorescens Pf-5]
ATGTGTACAA
>PFL_4364(PA1519) Score=4.7 Pos=-146 [Pseudomonas fluorescens Pf-5]
TTGTATACAA
>PFL_1883(PA1520) Score=4.8 Pos=-104 [Pseudomonas fluorescens Pf-5]
TTGTGTACAA
>PFL_1702(PA1503) Score=4.7 Pos=-22 [Pseudomonas fluorescens Pf-5]
TTGTATACAA
>PFL_1702(PA1503) Score=4.7 Pos=-161 [Pseudomonas fluorescens Pf-5]
TTGTATACAA
>PFL_4366(PA1517) Score=4.8 Pos=-291 [Pseudomonas fluorescens Pf-5]
TTGTACACAA
>PFL_4365(PA1518) Score=4.8 Pos=-142 [Pseudomonas fluorescens Pf-5]
TTGTGTACAA
>PFL_4365(PA1518) Score=4.7 Pos=-337 [Pseudomonas fluorescens Pf-5]
TTGTATACAA
# TF - UreR: PFL_5348
>PFL_5347(dctA) Score=4.8 Pos=-85 [Pseudomonas fluorescens Pf-5]
ACCGGTAAGACCACA
>PFL_5347(dctA) Score=4.8 Pos=-94 [Pseudomonas fluorescens Pf-5]
ACTGGACATACCGGT
>PFL_5347(dctA) Score=5.7 Pos=-170 [Pseudomonas fluorescens Pf-5]
ACTGGTCAGACCGGT
# TF - MetR: PFL_4890
>PFL_3662(metH) Score=4.9 Pos=-96 [Pseudomonas fluorescens Pf-5]
CATGAGCGATATTCATG
>PFL_3510(PF08908) Score=4.4 Pos=-190 [Pseudomonas fluorescens Pf-5]
CATGAATGTGACTAAAG
>PFL_3510(PF08908) Score=4.1 Pos=-169 [Pseudomonas fluorescens Pf-5]
GGTGAAATCAATTCATT
>PFL_2404(metE) Score=4.8 Pos=-69 [Pseudomonas fluorescens Pf-5]
AATGAGTTTGTCTCACC
>PFL_4890(metR) Score=3.8 Pos=-26 [Pseudomonas fluorescens Pf-5]
CACAAAATTTACTCATG
>PFL_4890(metR) Score=5.2 Pos=-57 [Pseudomonas fluorescens Pf-5]
CATGAGACAAACTCAAC
# TF - PFL_2191: PFL_2191
>PFL_2190(PF00583) Score=12.2 Pos=-91 [Pseudomonas fluorescens Pf-5]
TCATGGCCTAGT-(12)-TTTTGGCCCTGT-(2)-CTTAAGCCATTG
# TF - PdxQ3: PFL_2406, PFL_4112
>PFL_2405(PF00892) Score=12.7 Pos=-104 [Pseudomonas fluorescens Pf-5]
GCTGTATC-(1)-ATGACAAT-(6)-ATTGTGCT
>PFL_4111(PF01810) Score=10.3 Pos=-75 [Pseudomonas fluorescens Pf-5]
TGTGTATC-(1)-AGAACACT-(6)-TTTGTATC
# TF - YdcR: PFL_2868
>PFL_2834(ccoN) Score=8.1 Pos=-120 [Pseudomonas fluorescens Pf-5]
ATCTGATCCGTATTA---------TTCTGAGCCTGTTTT
>PFL_2869(COG0348) Score=9.4 Pos=-97 [Pseudomonas fluorescens Pf-5]
ATCTGATCCGGTTTT---------ACCTGAGTCTGTTAT
>PFL_2835(cysI) Score=7.1 Pos=-118 [Pseudomonas fluorescens Pf-5]
GGCTGATATGGTTTT---------ACCTGAATCTGTAAC
>PFL_0053(gadh3) Score=7.8 Pos=-203 [Pseudomonas fluorescens Pf-5]
AGCTGATCCGCTTTT---------TTCTGATCTTTTTTT
# TF - GcvR: PFL_4639
>PFL_4640(gcvH) Score=5 Pos=-280 [Pseudomonas fluorescens Pf-5]
CTGTACTGAAAGCGCTACAG
>PFL_4640(gcvH) Score=5.7 Pos=-261 [Pseudomonas fluorescens Pf-5]
GTGGAACGATTTCGCTACAA
>PFL_4640(gcvH) Score=5.5 Pos=-180 [Pseudomonas fluorescens Pf-5]
CTGTAGCGTTTTCGCTACGG
# TF - HmgR: PFL_0966
>PFL_0966(hmgR) Score=5 Pos=-70 [Pseudomonas fluorescens Pf-5]
AACGTAATTTGATTGCCCA
>PFL_0966(hmgR) Score=6.3 Pos=-90 [Pseudomonas fluorescens Pf-5]
ATCGTAATCCAATTACGCA
>PFL_0967(hmgA) Score=6.3 Pos=-96 [Pseudomonas fluorescens Pf-5]
TGCGTAATTGGATTACGAT
# TF - PdxR: PFL_0754
>PFL_0755(PF03594) Score=10.1 Pos=-116 [Pseudomonas fluorescens Pf-5]
AAGTGGTCTG-(13)-ATGTGGCTCG-(6)-TAGTCCATCC
>PFL_2438(PF00583) Score=9.4 Pos=-118 [Pseudomonas fluorescens Pf-5]
AAGTGGTCTG-(13)-AATTGGCCTG-(6)-TCCGCCACTC
# TF - YjiR: PFL_6043
>PFL_6042(yjiS) Score=15.1 Pos=-146 [Pseudomonas fluorescens Pf-5]
TACAGAT-(17)-TTCAGCA-(13)-AACTGTA-(23)-GTCTGTA
# TF - EutR: PFL_2247
>PFL_2247(eutR) Score=5.5 Pos=-77 [Pseudomonas fluorescens Pf-5]
CATGTAGCGTCTATTACATA
>PFL_2247(eutR) Score=4.4 Pos=-38 [Pseudomonas fluorescens Pf-5]
TATGAAATAAAAACGACATC
# TF - SdaR: PFL_3379
>PFL_3379(sdaR) Score=5.6 Pos=-106 [Pseudomonas fluorescens Pf-5]
CTTTGTGCCGGCGCACAGCG
>PFL_3379(sdaR) Score=5.3 Pos=-74 [Pseudomonas fluorescens Pf-5]
CCCTGTGCCACTGAACAACG
>PFL_3380(grtT) Score=5.3 Pos=-2 [Pseudomonas fluorescens Pf-5]
CGTTGTTCAGTGGCACAGGG
>PFL_3380(grtT) Score=5.6 Pos=30 [Pseudomonas fluorescens Pf-5]
CGCTGTGCGCCGGCACAAAG
# TF - PhrR: PFL_5146
>PFL_5142(COG1090) Score=5.6 Pos=-147 [Pseudomonas fluorescens Pf-5]
TGTACAATATTGTTTTTTGGTATA
>PFL_5143(COG3380) Score=5.7 Pos=-71 [Pseudomonas fluorescens Pf-5]
TATACCAAAAAACAATATTGTACA
>PFL_2258(folE) Score=4.3 Pos=-229 [Pseudomonas fluorescens Pf-5]
TGTACAGATAAAAAGTATTGAATC
>PFL_2258(folE) Score=4.8 Pos=-190 [Pseudomonas fluorescens Pf-5]
TGTACAAGTATTTGGGCTTATAAG
>PFL_2258(folE) Score=4.4 Pos=-145 [Pseudomonas fluorescens Pf-5]
TGTACAAAAAATTAAATTGTCGTA
>PFL_2328(mcp3) Score=6.1 Pos=-134 [Pseudomonas fluorescens Pf-5]
TGTACATGAAACTTTTTTTGTACA
>PFL_5145(COG3272) Score=6.5 Pos=-97 [Pseudomonas fluorescens Pf-5]
TATACAAATAATTTGACTTGTACA
# TF - PdxW2: PFL_6148
>PFL_6149(pdxO2) Score=12.8 Pos=-88 [Pseudomonas fluorescens Pf-5]
ATTGGACCC-(15)-GATGGCTCT-(5)-CGAACCATT
# TF - LexA2: PFL_3700
>PFL_3700(lexA2) Score=6.8 Pos=-17 [Pseudomonas fluorescens Pf-5]
GAGTACAAATGTACTC