# TF - NsrR2: CV3487
>CV3494(norB) Score=3.3 Pos=-85 [Chromobacterium violaceum ATCC 12472]
GATGTGCAATATATACATC
>CV2228(nasA) Score=5.5 Pos=-31 [Chromobacterium violaceum ATCC 12472]
CATGCAAACCATATGCATG
>CV3494(norB) Score=4.6 Pos=-59 [Chromobacterium violaceum ATCC 12472]
GATGCATGTATTCTGCATC
>CV2007(nirK) Score=3.9 Pos=-74 [Chromobacterium violaceum ATCC 12472]
CATGTATTAATTATGCATT
>CV3488(hmp) Score=3.5 Pos=-32 [Chromobacterium violaceum ATCC 12472]
GATGTATTTTTTAAATATC
>CV3488(hmp) Score=2.7 Pos=-96 [Chromobacterium violaceum ATCC 12472]
CATGTATTATTTGAACATC
# TF - HexR: CV0148
>CV0144(edd) Score=5.9 Pos=-48 [Chromobacterium violaceum ATCC 12472]
GTGTAGTAAAACTACTA
>CV0145(zwf) Score=5.9 Pos=-227 [Chromobacterium violaceum ATCC 12472]
TAGTAGTTTTACTACAC
>CV0144(edd) Score=4.8 Pos=-228 [Chromobacterium violaceum ATCC 12472]
ATGTAGTTATATTACCA
>CV0145(zwf) Score=4.8 Pos=-47 [Chromobacterium violaceum ATCC 12472]
TGGTAATATAACTACAT
>CV0980(ptsHI) Score=5.6 Pos=-213 [Chromobacterium violaceum ATCC 12472]
ATGTAGTTTAACTACAA
# TF - BirA: CV0486
>CV4381(bioB) Score=8 Pos=-132 [Chromobacterium violaceum ATCC 12472]
TTGTCAATT--------------GTTTGACAG
>CV4382(COG1040) Score=8 Pos=-39 [Chromobacterium violaceum ATCC 12472]
CTGTCAAAC--------------AATTGACAA
# TF - NrtR: CV0032
>CV0032(nrtR) Score=5.7 Pos=-47 [Chromobacterium violaceum ATCC 12472]
TTAGTTGGTTATTTCGACTAA
>CV0032(nrtR) Score=6.2 Pos=-4 [Chromobacterium violaceum ATCC 12472]
TTAGTTGAATTTTGCAACTAA
>CV0033(prs) Score=6.2 Pos=-119 [Chromobacterium violaceum ATCC 12472]
TTAGTTGCAAAATTCAACTAA
>CV0033(prs) Score=5.7 Pos=-76 [Chromobacterium violaceum ATCC 12472]
TTAGTCGAAATAACCAACTAA
# TF - NrdR: CV1287
>CV2287(nrdA) Score=5.2 Pos=-283 [Chromobacterium violaceum ATCC 12472]
CTACAACATCTAGTGC
>CV2287(nrdA) Score=4.5 Pos=-50 [Chromobacterium violaceum ATCC 12472]
ACGGTATATATTGTGT
>CV1446(nrdJa) Score=4.6 Pos=-121 [Chromobacterium violaceum ATCC 12472]
ACACAACAACTTGCGT
>CV1446(nrdJa) Score=5.3 Pos=-88 [Chromobacterium violaceum ATCC 12472]
TAACAACATATAGTGT
>CV2412(nrdD) Score=4.5 Pos=-162 [Chromobacterium violaceum ATCC 12472]
GCACAATATATTGATC
# TF - LldR: CV3037
>CV3030(lldE) Score=6.3 Pos=-30 [Chromobacterium violaceum ATCC 12472]
AATTGGTCTTACCAATT
>CV3037(lldR) Score=4.4 Pos=-27 [Chromobacterium violaceum ATCC 12472]
ATCCGGTCAGACCAATT
# TF - HutC: CV0320
>CV0321(hutI) Score=4.7 Pos=-35 [Chromobacterium violaceum ATCC 12472]
TTAATTGTATATACAAATAA
>CV0321(hutI) Score=4.1 Pos=-184 [Chromobacterium violaceum ATCC 12472]
TAAACGGTATATACAATTGG
# TF - IscR: CV1095
>CV1095(iscR) Score=6.6 Pos=-71 [Chromobacterium violaceum ATCC 12472]
ATACTTGACTAATTTAGTCGGATAT
# TF - NagQ: CV0555
>CV1897(chiA) Score=4.7 Pos=-54 [Chromobacterium violaceum ATCC 12472]
TGGTTCCATAGTGGTATT
>CV0555(nagQ) Score=5.7 Pos=-137 [Chromobacterium violaceum ATCC 12472]
TGGTATTGACGTGGTATT
>CV0555(nagQ) Score=6 Pos=-126 [Chromobacterium violaceum ATCC 12472]
TGGTATTAATGTGGTATT
>CV3489(cbp21) Score=-0.9 Pos=-262 [Chromobacterium violaceum ATCC 12472]
TATACCAAATAAATGCCG
>CV1493(hex) Score=-1.1 Pos=-100 [Chromobacterium violaceum ATCC 12472]
AATACCAATTAAATACCA
>CV3316(cdxA) Score=-1.6 Pos=-63 [Chromobacterium violaceum ATCC 12472]
AATACCACTTCAATACAA
>CV2935(chi) Score=-1 Pos=-32 [Chromobacterium violaceum ATCC 12472]
AATACCAATTGAACGTCA
>CV2935(chi) Score=-1.4 Pos=-43 [Chromobacterium violaceum ATCC 12472]
AATACCAATCAAATACCA
>CV0263(ybfM) Score=0.1 Pos=-77 [Chromobacterium violaceum ATCC 12472]
AAGACCAATATAAGACCA
>CV0263(ybfM) Score=-0.8 Pos=-88 [Chromobacterium violaceum ATCC 12472]
CATACCAATTGAAGACCA
>CV4240(chiC) Score=-1.6 Pos=-98 [Chromobacterium violaceum ATCC 12472]
GATACCAATGTAATACCA
>CV3490(cga) Score=4.8 Pos=-94 [Chromobacterium violaceum ATCC 12472]
CGGCATTTATTTGGTATA
# TF - NtrC: CV3592
>CV3591(ntrB) Score=6 Pos=-118 [Chromobacterium violaceum ATCC 12472]
TGCACCAAAATGGTGCA
>CV4002(glnK) Score=5.2 Pos=-176 [Chromobacterium violaceum ATCC 12472]
TGCACCAAAACCGTGCA
>CV3589(glnA) Score=5.2 Pos=-202 [Chromobacterium violaceum ATCC 12472]
GGCACCATATCGGTGCA
>CV3589(glnA) Score=4.7 Pos=-172 [Chromobacterium violaceum ATCC 12472]
GGCACCAGAATGGTTCA
# TF - LiuR: CV1779, CV2087
>CV2086(ivdG) Score=5.5 Pos=-60 [Chromobacterium violaceum ATCC 12472]
GTTGACGTAAACGTCAAG
>CV2086(ivdG) Score=6.1 Pos=-66 [Chromobacterium violaceum ATCC 12472]
GTTGACGTTGACGTAAAC
>CV0303 Score=6.2 Pos=-262 [Chromobacterium violaceum ATCC 12472]
GTTGACGTAAACGTAAAC
>CV0303 Score=5.8 Pos=-268 [Chromobacterium violaceum ATCC 12472]
TTTGACGTTGACGTAAAC
>CV2087(liuR) Score=5.5 Pos=-87 [Chromobacterium violaceum ATCC 12472]
GTTTACGTCAACGTCAAC
>CV2087(liuR) Score=6.4 Pos=-93 [Chromobacterium violaceum ATCC 12472]
CTTGACGTTTACGTCAAC
>CV1779(liuR) Score=5 Pos=-75 [Chromobacterium violaceum ATCC 12472]
GATTACGTAAACGTAAAT
>CV1779(liuR) Score=6.1 Pos=-81 [Chromobacterium violaceum ATCC 12472]
ATTGACGATTACGTAAAC
>CV1766(liuA) Score=6.5 Pos=-80 [Chromobacterium violaceum ATCC 12472]
ATTGACGCTTACGTAAAC
>CV1766(liuA) Score=5.3 Pos=-74 [Chromobacterium violaceum ATCC 12472]
GCTTACGTAAACGTAAGC
>CV1780(aacS2) Score=5.8 Pos=-54 [Chromobacterium violaceum ATCC 12472]
ATTTACGTTTACGTAATC
>CV1780(aacS2) Score=4.8 Pos=-48 [Chromobacterium violaceum ATCC 12472]
GTTTACGTAATCGTCAAT
# TF - PsrA: CV2724
>CV2724(psrA) Score=5.6 Pos=-84 [Chromobacterium violaceum ATCC 12472]
GTTAAAACGTAAGTTTGAAA
>CV2724(psrA) Score=5.3 Pos=-71 [Chromobacterium violaceum ATCC 12472]
TTTGAAACGCTTGTTCGAAA
>CV2721(fadL) Score=4.8 Pos=-136 [Chromobacterium violaceum ATCC 12472]
CATTAAACGAACGTTTGGAA
>CV2720(acdB) Score=5.1 Pos=-257 [Chromobacterium violaceum ATCC 12472]
ATAAAAGCGAGTGTTTGATA
>CV1459(fadD) Score=4.7 Pos=-137 [Chromobacterium violaceum ATCC 12472]
GATCAAACCGCGGTTTGATC
>CV3350 Score=6.1 Pos=-24 [Chromobacterium violaceum ATCC 12472]
ATCCAAACGACCGTTTGAAT
>CV3818(etfB) Score=5.9 Pos=-101 [Chromobacterium violaceum ATCC 12472]
AACCAAACGCTCGTTTGAAT
>CV2194(fabK) Score=6 Pos=-78 [Chromobacterium violaceum ATCC 12472]
ATTAAAACATTCGTTTGAAA
>CV1785(acdH) Score=5.7 Pos=-106 [Chromobacterium violaceum ATCC 12472]
ATTTAAACAAACGTTTGAAC
>CV3916(etfD) Score=5.7 Pos=-108 [Chromobacterium violaceum ATCC 12472]
GTTTAAACGCTTGTTTGATT
>CV3412(fabF) Score=5.6 Pos=-91 [Chromobacterium violaceum ATCC 12472]
TTCCAAACGCGCGTTTGAAC
>CV4051(fadD) Score=5.2 Pos=-18 [Chromobacterium violaceum ATCC 12472]
ATTAAAACCATCGTTTGCAT
# TF - PhnF: CV1847
>CV1847(phnF) Score=6.2 Pos=-121 [Chromobacterium violaceum ATCC 12472]
TATAAACGTATAGACGTATCCA
>CV1846(phnG) Score=6.2 Pos=-51 [Chromobacterium violaceum ATCC 12472]
TGGATACGTCTATACGTTTATA
# TF - Zur2: CV3068
>CV3068(zur2) Score=6.2 Pos=-137 [Chromobacterium violaceum ATCC 12472]
GCGATGTTATACAGTAACATTAT
# RNA - TPP
>CV0235(thiC) Score=50.4 Pos=-223 [Chromobacterium violaceum ATCC 12472]
GGCATCGCTAGGGGTCCTGCGCCTGGCGTTCGGCGCAGATGGCTAGCAAAGTGTAGGCCATGGCGGCGGATGACGGAGCGCGGGTGAGAAATACCCTTGGAACCTGACCCGGATAATACCGGCGTAGGGAAGCGTCACCTGCCCGCCAT
>CV3164(thiB) Score=64.3 Pos=-146 [Chromobacterium violaceum ATCC 12472]
GCCCTGTCACCGGGGGTGCCCGCCATGCGGGCTGAGAGACACCCTGAGAACCTGATCTGGATCATGCCAGCGGAGGGAGCGTGATGAAGCGGAATC
# RNA - FMN
>CV4216(ribB) Score=110.4 Pos=-279 [Chromobacterium violaceum ATCC 12472]
TACGTCTTCGGGGCGGGGTGCAACTCCCCACCGGCGGTATGGCGCGCAAGCGCCGAGCCCGCGAGCGCCTTTGCCTGACGGCAAAGGGTCAGCAGATCTGGTGAAACGCCAGAGCCGACGGTAATAGTCCGGATGAGAGAAGACGACGCC
# TF - HrcA: CV1608
>CV4015(groS) Score=7.3 Pos=-94 [Chromobacterium violaceum ATCC 12472]
TTAGCACTCGCAATGGTCGAGTGCTAA
>CV4206(rpoH) Score=6.8 Pos=-58 [Chromobacterium violaceum ATCC 12472]
CTAGCACTCTCAATATTCGAGTGCTAA
# TF - GntR: CV2956
>CV2957(gntK) Score=6.7 Pos=-20 [Chromobacterium violaceum ATCC 12472]
TTTTGTTAGCGCTAACATCA
# TF - SoxR: CV2793
>CV2794(wrbA) Score=5.2 Pos=-58 [Chromobacterium violaceum ATCC 12472]
ACTTCAAGTTAACTTGAACT
# TF - CadR-PbrR: CV1153
>CV1154(cadA) Score=6.7 Pos=-154 [Chromobacterium violaceum ATCC 12472]
ACCCTGTAGTGACTACAGGGT
# RNA - SAH_riboswitch
>CV0965(ahcY) Score=29.1 Pos=-160 [Chromobacterium violaceum ATCC 12472]
CCGAGGAGCGCTGCGAGGAGAACCCTTCCCCAGGCTCGGGCA
# TF - MetR: CV3603
>CV3603(metR) Score=4.8 Pos=-47 [Chromobacterium violaceum ATCC 12472]
ATGATTCAAACTCAT
>CV3604(metE) Score=4.8 Pos=-67 [Chromobacterium violaceum ATCC 12472]
ATGAGTTTGAATCAT
# TF - FruR2: CV3051
>CV3051(fruR2) Score=4.9 Pos=-155 [Chromobacterium violaceum ATCC 12472]
CATTGAAAACGATTACATTT
>CV3051(fruR2) Score=4.4 Pos=-22 [Chromobacterium violaceum ATCC 12472]
AATTGAAAACGATTTCTCAG
>CV3052(fruB) Score=4.4 Pos=-186 [Chromobacterium violaceum ATCC 12472]
CTGAGAAATCGTTTTCAATT
>CV3052(fruB) Score=4.9 Pos=-53 [Chromobacterium violaceum ATCC 12472]
AAATGTAATCGTTTTCAATG
# TF - CV1900: CV1900, CV1935
>CV1936(PF01810) Score=6.3 Pos=-132 [Chromobacterium violaceum ATCC 12472]
AACTGTTATGGTCT-----------------ATCTGTAATTGTCC
>CV1901(PF01810) Score=9.2 Pos=-115 [Chromobacterium violaceum ATCC 12472]
ATCTGTAACCAGAT-----------------ATCTGTATCCATCA
>CV1935(CV1900) Score=7.8 Pos=-110 [Chromobacterium violaceum ATCC 12472]
AATTGAGACCATAA-----------------AACTGTTACGGTCG
# TF - CV1517: CV1517
>CV1518(COG2513) Score=11.4 Pos=-39 [Chromobacterium violaceum ATCC 12472]
TCATGGCCTATT-(12)-TTTTGGCTCTCA-(2)-ATTGTACCATGC
# TF - YdcR: CV1451
>CV1452(COG0348) Score=6.3 Pos=-33 [Chromobacterium violaceum ATCC 12472]
ATCTGTACTGATATT---------GTCTGTTCATTGTTT
# TF - CV4096: CV4096
>CV4095(COG0607) Score=9.9 Pos=-95 [Chromobacterium violaceum ATCC 12472]
AGTGGTTCCGT------------AGTGGAGCTAT
# TF - SdhR: CV1063
>CV1063(sdhR) Score=7 Pos=77 [Chromobacterium violaceum ATCC 12472]
TCTTATGTCTTATATAAGACTTATCT
>CV1062(mdh) Score=7 Pos=-162 [Chromobacterium violaceum ATCC 12472]
AGATAAGTCTTATATAAGACATAAGA
# TF - TreR: CV3302
>CV3300(treP) Score=4.7 Pos=-146 [Chromobacterium violaceum ATCC 12472]
AACTCGTACAGACGAGTG
>CV3300(treP) Score=6.5 Pos=-122 [Chromobacterium violaceum ATCC 12472]
AACTTGTATGTACAAGTT