# TF - NagR: lp_0563
>lp_0562(nagA) Score=5.2 Pos=-55 [Lactobacillus plantarum WCFS1]
AGTTTGGTCTATACCGATTA
>lp_0822(glmS) Score=4.1 Pos=-213 [Lactobacillus plantarum WCFS1]
AGGTTAGACTAGACCAATTG
>lp_2531(nagE) Score=4.2 Pos=-100 [Lactobacillus plantarum WCFS1]
ACATTGGTCTATACACTTAG
>lp_2969(nagE) Score=5 Pos=-97 [Lactobacillus plantarum WCFS1]
CCAATGGACTATACCAATAA
>lp_0226(nagB) Score=5.4 Pos=-60 [Lactobacillus plantarum WCFS1]
ATTTTAGTCTAGACCAATAT
>lp_0226(nagB) Score=4.8 Pos=-39 [Lactobacillus plantarum WCFS1]
CAATTGGACTATACCAAACA
# TF - Lp_3221: lp_3221
>lp_3220(agl4) Score=6.4 Pos=-35 [Lactobacillus plantarum WCFS1]
AAGTGGAATCGATTCCAAAT
>lp_3221(lp_3221) Score=6.2 Pos=-36 [Lactobacillus plantarum WCFS1]
TTATGGAAACGATTCCAAAC
# TF - PurR: lp_0466
>lp_3269(purB) Score=4.3 Pos=-201 [Lactobacillus plantarum WCFS1]
AAAACCGAATGTT
>lp_2729(purE) Score=5 Pos=-104 [Lactobacillus plantarum WCFS1]
TAACACGAACATT
>lp_0848(pbuG) Score=5.3 Pos=-57 [Lactobacillus plantarum WCFS1]
AAACACGAACGTT
>lp_0466(purR) Score=4.3 Pos=12 [Lactobacillus plantarum WCFS1]
AGAAGCGAACGTT
>lp_3270(purA) Score=5.1 Pos=-135 [Lactobacillus plantarum WCFS1]
AAACAAGAACATT
>lp_3270(purA) Score=4.5 Pos=-239 [Lactobacillus plantarum WCFS1]
AGAGACGAACAAT
>lp_3270(purA) Score=5.6 Pos=-280 [Lactobacillus plantarum WCFS1]
AAACACGAACATT
# TF - CcpA: lp_2256
>lp_2757(nplT) Score=4.9 Pos=-32 [Lactobacillus plantarum WCFS1]
ATGTAATCGTTTACAT
>lp_3623(sorD) Score=3.9 Pos=-130 [Lactobacillus plantarum WCFS1]
ATAACAGCGCTTTTTA
>lp_3660(rbsK) Score=4.9 Pos=-72 [Lactobacillus plantarum WCFS1]
ATTAAAACGTTTTCAT
>lp_3469(lacZ) Score=4.6 Pos=-66 [Lactobacillus plantarum WCFS1]
ATGAAAGCGCTTATCA
>lp_2781(pts20B) Score=4.7 Pos=-68 [Lactobacillus plantarum WCFS1]
ATGAAAGCGGTTTATT
>lp_0370(glpK) Score=5 Pos=-46 [Lactobacillus plantarum WCFS1]
ATGATAGCGTTTTCAT
>lp_3436(glpF2) Score=4.6 Pos=-82 [Lactobacillus plantarum WCFS1]
AATAAAGCGTTTACAT
>lp_2502(pgi) Score=3.8 Pos=-77 [Lactobacillus plantarum WCFS1]
GAGGAAGCGCTTTTCA
>lp_3436(glpF2) Score=4.3 Pos=-104 [Lactobacillus plantarum WCFS1]
TAGAAACCGCTTATTT
>lp_0439(gmuC) Score=5.1 Pos=-78 [Lactobacillus plantarum WCFS1]
TTGTAAGCGCTTTTAA
>lp_0168(dhaK) Score=4.6 Pos=-58 [Lactobacillus plantarum WCFS1]
TTGAAATCGGATTCAT
>lp_3011(bglB) Score=4.5 Pos=-43 [Lactobacillus plantarum WCFS1]
AGGAAAGCGTTTTCCA
>lp_3469(lacZ) Score=4.2 Pos=-177 [Lactobacillus plantarum WCFS1]
AATAATACGCTTTCAT
>lp_2256(ccpA) Score=5.2 Pos=-121 [Lactobacillus plantarum WCFS1]
ATGAAAGCGATTTCAA
>lp_2256(ccpA) Score=4 Pos=-51 [Lactobacillus plantarum WCFS1]
ATGAAAACGGATGAAA
>lp_0498(rbsP) Score=4.8 Pos=-30 [Lactobacillus plantarum WCFS1]
AAGAAAGCGCTAACAT
>lp_3533(malT2) Score=4.7 Pos=-72 [Lactobacillus plantarum WCFS1]
TTGTAAACGTTTACGT
>lp_3533(malT2) Score=4.6 Pos=-104 [Lactobacillus plantarum WCFS1]
GTGTAAACGTTTACTT
>lp_2095(fruR) Score=4.3 Pos=-6 [Lactobacillus plantarum WCFS1]
TTGAAAGTGCTTACAG
>lp_0575(manL) Score=4 Pos=1 [Lactobacillus plantarum WCFS1]
TGGTAAGCATTATCAT
>lp_2544(hcaD) Score=4.3 Pos=-200 [Lactobacillus plantarum WCFS1]
TTGTAACCGTTTTAGT
>lp_1729(malT) Score=5 Pos=-65 [Lactobacillus plantarum WCFS1]
TTGAAAGCGGTTTTAT
>lp_3557(araE) Score=4.6 Pos=-63 [Lactobacillus plantarum WCFS1]
TTGAAAGGGCTTTCTA
>lp_1468(sufC) Score=4.3 Pos=-138 [Lactobacillus plantarum WCFS1]
ATGAAAACGGTTATAC
>lp_1468(sufC) Score=4.5 Pos=-186 [Lactobacillus plantarum WCFS1]
ATGAAAGGGCTTTTAT
>lp_3529(licT) Score=4.7 Pos=-160 [Lactobacillus plantarum WCFS1]
TTGACACCGCTTACAA
>lp_0230(mtlA) Score=4.8 Pos=-63 [Lactobacillus plantarum WCFS1]
TTGAAACCGCTTACCA
>lp_3596(rhaY) Score=4.7 Pos=-33 [Lactobacillus plantarum WCFS1]
ATGAAACCGCTTACCA
>lp_2629(spxB) Score=4.1 Pos=-41 [Lactobacillus plantarum WCFS1]
ACGAAAACGTATACAA
>lp_0242(ndk) Score=4.8 Pos=-37 [Lactobacillus plantarum WCFS1]
ATGATACCGCTTTCAA
>lp_3418(pck) Score=4.8 Pos=-68 [Lactobacillus plantarum WCFS1]
AAGAAAACGCTTTCTT
>lp_0904(licT) Score=4.5 Pos=-147 [Lactobacillus plantarum WCFS1]
GAGAAAACGCTATCAT
>lp_0152(lhv_0924) Score=4.2 Pos=-193 [Lactobacillus plantarum WCFS1]
ATGTAGCCGGTTACAT
>lp_3133(glclP) Score=4.6 Pos=-137 [Lactobacillus plantarum WCFS1]
ATGTAAAGGCTTACAT
>lp_3229(glclP) Score=4.1 Pos=-246 [Lactobacillus plantarum WCFS1]
TTGTAACGGCTTTCAC
>lp_3051(dhaT) Score=4.7 Pos=-36 [Lactobacillus plantarum WCFS1]
ATGATAGCGATTACAA
>lp_3054(adhX) Score=4.5 Pos=-41 [Lactobacillus plantarum WCFS1]
TTGTAAGCGGTTTACA
>lp_3054(adhX) Score=4.6 Pos=-85 [Lactobacillus plantarum WCFS1]
TTGTAAGCGCTTGAAT
>lp_3092(gabD) Score=4 Pos=-45 [Lactobacillus plantarum WCFS1]
GATTAACCGTTTACAA
>lp_3489(yghZ) Score=4.6 Pos=-49 [Lactobacillus plantarum WCFS1]
ATGAAAGCGGTAACTT
>lp_3566(LVIS_0439) Score=5.1 Pos=-190 [Lactobacillus plantarum WCFS1]
AAGAAAGCGTTTACAA
>lp_1273(ptsH) Score=4 Pos=-135 [Lactobacillus plantarum WCFS1]
ATGAAAGGGCTTGTAT
>lp_0187(scrB) Score=4.6 Pos=-59 [Lactobacillus plantarum WCFS1]
GTGTAAGCGGTTTTAT
>lp_0187(scrB) Score=4.3 Pos=-213 [Lactobacillus plantarum WCFS1]
ATGCAAGCGCTTTACA
>lp_2258(pepQ) Score=5.2 Pos=-158 [Lactobacillus plantarum WCFS1]
TTGAAATCGCTTTCAT
>lp_2154(pdhA) Score=4.5 Pos=-67 [Lactobacillus plantarum WCFS1]
ATGAAAACGATTACGA
>lp_2154(pdhA) Score=4.1 Pos=-118 [Lactobacillus plantarum WCFS1]
TTGGAAGGGCTTGCAA
>lp_3240(treP) Score=4.8 Pos=-118 [Lactobacillus plantarum WCFS1]
AAGAAAGCGCTTTTAT
>lp_0262(treR) Score=4.7 Pos=-29 [Lactobacillus plantarum WCFS1]
ATGAAAACGATAACAA
>lp_3483(lacL) Score=5 Pos=-43 [Lactobacillus plantarum WCFS1]
TTGTAAGCGTTTTTAT
>lp_0185(scrA) Score=4.1 Pos=-58 [Lactobacillus plantarum WCFS1]
TGTAAAGCGCTTGCAT
>lp_0185(scrA) Score=4 Pos=-157 [Lactobacillus plantarum WCFS1]
ATGTCAGCGTTTCAAA
>lp_0185(scrA) Score=4.3 Pos=-212 [Lactobacillus plantarum WCFS1]
ATAAAACCGCTTACAC
>lp_2968(ydgI) Score=4.8 Pos=-99 [Lactobacillus plantarum WCFS1]
ATGATAGCGATTTCAA
>lp_0060(yxjF) Score=4.4 Pos=-96 [Lactobacillus plantarum WCFS1]
ATGAAAGCGTAGTCAA
>lp_3657(sorD) Score=4.4 Pos=-61 [Lactobacillus plantarum WCFS1]
ATGTATGCGCTTTCGT
>lp_3644(msmX) Score=4.3 Pos=-187 [Lactobacillus plantarum WCFS1]
TAATAAACGTTTTAAT
>lp_3644(msmX) Score=4.4 Pos=-49 [Lactobacillus plantarum WCFS1]
GAGAAAGCGGTTACTA
>lp_0764(pgm) Score=4.4 Pos=-40 [Lactobacillus plantarum WCFS1]
TTGTAAGCACTAACAA
>lp_0849(spxB) Score=4.3 Pos=-390 [Lactobacillus plantarum WCFS1]
ATGTAAGCGTCATCAT
>lp_0849(spxB) Score=4.9 Pos=-86 [Lactobacillus plantarum WCFS1]
ATAAAAGCGTTTACAT
>lp_3598(fucR) Score=4.9 Pos=-279 [Lactobacillus plantarum WCFS1]
TTGTAAGCGCATACAT
>lp_3598(fucR) Score=3.9 Pos=-189 [Lactobacillus plantarum WCFS1]
TAGTAATCGGTAAAAA
>lp_3589(spxB) Score=4.3 Pos=-77 [Lactobacillus plantarum WCFS1]
ATGTAAGCGTTTGCTG
>lp_0193(nplT) Score=4.2 Pos=-73 [Lactobacillus plantarum WCFS1]
TTGTAAGCGGTACCTT
>lp_3623(sorD) Score=4.3 Pos=-62 [Lactobacillus plantarum WCFS1]
TAGATAGCGTTTACAG
>lp_0913(coaA) Score=4.2 Pos=-61 [Lactobacillus plantarum WCFS1]
TTGATAAGGGTTTCAT
>lp_3627(nplT) Score=4.5 Pos=-73 [Lactobacillus plantarum WCFS1]
ATGTAAGGGGTTACAT
>lp_3531(malR3) Score=4.4 Pos=-113 [Lactobacillus plantarum WCFS1]
ACGTAAACGTTTACAA
>lp_3531(malR3) Score=4.4 Pos=-81 [Lactobacillus plantarum WCFS1]
AAGTAAACGTTTACAC
>lp_0175(malX) Score=4 Pos=-101 [Lactobacillus plantarum WCFS1]
CTGTTAACGTTAACAT
# TF - AraR: lp_3558
>lp_3557(araE) Score=6.5 Pos=-166 [Lactobacillus plantarum WCFS1]
TGATTTATACGTATAAATAT
>lp_3558(araR) Score=5.2 Pos=-234 [Lactobacillus plantarum WCFS1]
TTATTGATGCGGATAAATTG
>lp_3557(araE) Score=4.7 Pos=-195 [Lactobacillus plantarum WCFS1]
TAATTTGTGCTGATAAAACA
# RNA - L10_leader
>lp_0621(rplJ) Score=73.1 Pos=-142 [Lactobacillus plantarum WCFS1]
GTTAAGTAATATCTCTACCTAAGACTCAGGCGGCTTAACGGCCTTAATCTACCTGCCGAGGACATTGTTTTTTCTCTATGTCTTGGTGGACATAGGGATTTTTTTATAAATCCCT
# RNA - TPP
>lp_0219(ykoE) Score=58.1 Pos=-197 [Lactobacillus plantarum WCFS1]
TTCATAGCAACTGGGGTGCCATCACGGCTGAGATAATACCCATTGAACCTGAATCTGGACAATGCCAGCGCAGGGAGCAATGCTTTTATTTGGGG
>lp_0113(thiM) Score=67.4 Pos=-183 [Lactobacillus plantarum WCFS1]
TTAAACACTAGGGGTGTCCAAAAATGGGCTGAGATGGTGCTGTAAGTACCGATCCCTTTGAACCTGTAAGCTCAAACTTGCGTAGGAAAGTGTCACAGCTAATGTTA
# RNA - FMN
>lp_1887(ribU) Score=99.1 Pos=-246 [Lactobacillus plantarum WCFS1]
GGTTCATCTTCAGGGCAGGGTGTGATTCCCGACCGGCGGTAATAACCCGCGACCTATGCGTGTGCATAGTGATTTGGTGCAATTCCAAAGTCGACAGTAAAGTCTGGTATAAAGAAGATCGAG
# RNA - PyrR
>lp_2704(pyrR) Score=59 Pos=-141 [Lactobacillus plantarum WCFS1]
AAGCACCTTTAACTTAGTCCTGTGAGGCTAACAAGGGGAACGGTCATGTAGGGTCTCCCACGCTTTTCGCAGGAAAACAGGGTGACTCTTTTTT
>lp_2371(pyrP) Score=59.8 Pos=-146 [Lactobacillus plantarum WCFS1]
CAGTTCCTTTAAATTAGCTCAGAGAGGCTGAAAAGGATGAACGGACGTGCGCTTTCAAGCAAGCTGTGCGTAATTTCGGACAGCCTAGCCGCTTTGAGTGGTGGGCTGTCTTTTCT
>lp_1782(pyrR) Score=25.4 Pos=-143 [Lactobacillus plantarum WCFS1]
CGTCCTTTAATCCGGCCCTGCGAGACTGAAAGGCAAACTGTTAACAATAACTTTTCGTCGACGGCCGTGACACCTTGTCCGGCCGTCTTTCTTTGT
>lp_2703(pyrB) Score=42.7 Pos=-136 [Lactobacillus plantarum WCFS1]
TAAAACCATTTAATTGTTTCCAGAGAGGAACGAAACGGTTTGGTCATGCGTGACCACTTAATCGGAGTCTAGCCTCTTTGCAAACATTTTTGCGGAAGCTAGACTTTTTTTA
# RNA - L13_leader
>lp_1077(rplM) Score=58.1 Pos=-75 [Lactobacillus plantarum WCFS1]
GTATTGTTTGCCCCACGATAAGCCCCGGAAATCTTATTGAGTGTCAAACAAACACAGAAA
# RNA - L19_leader
>lp_1640(rplS) Score=35.3 Pos=-54 [Lactobacillus plantarum WCFS1]
CGATGTTCCGCTGACCAGGTTGTCACGAATGTCGGCG
# RNA - L20_leader
>lp_1515(infC) Score=88.8 Pos=-146 [Lactobacillus plantarum WCFS1]
AAAAAAAGCAGAAGCACCCGCTTCTCGCCTTGGTGACCAGAGTCATCGGGCAGATGAACGATGAATTGATTCCCATTAACGGGGTTGAGCGGGCGTACTATGCGCCCGCTCTTTTTGTGAATTTC
# RNA - L21_leader
>lp_1592(rplU) Score=53.9 Pos=-95 [Lactobacillus plantarum WCFS1]
TACAGCTACAACCGCACGGATTGAGTCTTAAGATCAGCAATGGCACTTACATTCGGCGAGTCTAAGTGATTTATA
# RNA - Lysine
>lp_1008(lysP) Score=108.4 Pos=-324 [Lactobacillus plantarum WCFS1]
TCGAAAGAAGAGGATGCGGTTAACAATAGTAGCCGGCTGGAAGTGGGTCACCACTTATGAAGGTCAGTGAACGGGGCAACCGCCGAAATCGATGGATCAGTGACCGATTCATCCGTTGGGCCTTGGTTGAATAAATCATGGACTGTCGCAGCTAGAATAGTTGCGGGGCGCTATCGACGATGA
# RNA - PreQ1
>lp_0533(queT) Score=45.5 Pos=-53 [Lactobacillus plantarum WCFS1]
AATACGTGGTTCGTAACCATCCCACGTTAAAAAAACTAGGAGGAATT
>lp_2825(iunH) Score=48.2 Pos=-66 [Lactobacillus plantarum WCFS1]
AGCTGGCCTGGTTCGTAAACTTCCCAGGATAAAAAACCAAGAACTT
# RNA - Purine
>lp_2710(pbuX) Score=64.9 Pos=-157 [Lactobacillus plantarum WCFS1]
TCAAATAAGTGGTAATTGCCTATATAATGTCATGATATGGTTGACGAGTTTCTACCCAACCCCGTAAAGGTTGGACTATAAGCAAACGAGGTCATCCCGT
>lp_3334(adeC) Score=70.3 Pos=-177 [Lactobacillus plantarum WCFS1]
TTTATCAATACAACTAATTGCCTATATAATGCCATGATATGGATGGCGAGTTTCTACCCAGTGCCGTAAACACTGGACTATAAGCGAATTGAGTCGACGG
# TF - Rex: lp_0725
>lp_3662(adhE) Score=5.5 Pos=-43 [Lactobacillus plantarum WCFS1]
TTGTAAATTAATTCACAA
>lp_3449(noxE) Score=5 Pos=-36 [Lactobacillus plantarum WCFS1]
TTGTGAATATAAACACAT
>lp_3051(dhaT) Score=5 Pos=-116 [Lactobacillus plantarum WCFS1]
TTGTGAAAAATATAATTA
# RNA - glmS
>lp_0822(glmS) Score=94 Pos=-183 [Lactobacillus plantarum WCFS1]
AAAGCGGAATAGCGCCAGGACTTTAGAATCTAAAGTTGACGAGGATGACGTTTATCGATAATCGACGGGTGACGTCAGGGACTGCACTCTACAGGTCAATTACAAAAACCGACTGTGAGGTTGGTGACAGATATATTGACCACGCAGCTAGAA
# RNA - ykoK
>lp_2077(lp_2077) Score=125.5 Pos=-265 [Lactobacillus plantarum WCFS1]
AATCAGTTGCAATTAGGTGAGGTTACTTTAAGAATATAGGTTATCGCCCAGAAATGTCGAGAGACAGGAATGAGTAAAGCAGAATTTGCCGAATTAAGGCTCTTTCAAGATAACTAGACTAGTTCTTACGTCTTAAAGTGCTAAAACTCAATGAATGCGTCGATG
# RNA - yybP-ykoY
>lp_0567(atcL) Score=64.1 Pos=-189 [Lactobacillus plantarum WCFS1]
ATACAATCATAAGGGAGTAACTAGCAGAAATATTCTGCGGCAATATCGTCAGCAAGAAGCCAATCCGGTATTGTCTTAAATAGTGAGACTTATGTATGTTCACA
# RNA - T-box(Ala)
>lp_2277(alaS) Score=60.2 Pos=-262 [Lactobacillus plantarum WCFS1]
TTTCTATACTTTGCAAAGTAAGGACATATCTATCTCACATATCGGTCAAGAAACACTTTGGTTGCTGGAAAAAGTGCGGTGTGGGGTAGATGCTACCTAGAAGTAATGACTAGCAAACTAGTCCGTGTCTCAGCGTTAATGAGCTTAAGAGGTAAACGAACACATCGTTGCAAGCAGAGTGGTACCGCGTTAACAGCGTCTTTGCT
# RNA - T-box(Asn)
>lp_0957(asnA) Score=91.1 Pos=-330 [Lactobacillus plantarum WCFS1]
ATAAAAAACGGAGGAAAGAGGAGTACGATTAGTCAACCTGCCAGTGAATCGGGAGTGAGTGGAAACCCGACCAGAACTTGACTAATCCGAAAAACACTTTCTTAGTTGCTAACTGAAATAACCTCGTTAAAGTAGGATTAGCCGTTAACCGGTACGTTACCATCGGTGGTGTATGTTTGTACACTATTTTAAAGCTGGTTTACTGTAAGGTAAACAACTTGGGTGGTACCGCGAAAGAGTCTTTCGTCCCTTGA
# RNA - T-box(Asp)
>lp_1981(hisS) Score=48 Pos=-238 [Lactobacillus plantarum WCFS1]
CAATCGACCGCAGAGAAAGTAAGAGCATTGTACGCCACTATAACCAGAGACCGGTAAGTGCTGAGAATTCCGGATAGTGCGCAATGAGGAGACGCTTTTGAGGTGAACGGCAGCGTTCCGCCTGTGATTACAGACGTTATCAATTAGTACTCAAAAAGGTGGTACCGCGCTAATAGCGCCCTTGGT
# RNA - T-box(Arg)
>lp_1391(argS) Score=82.7 Pos=-226 [Lactobacillus plantarum WCFS1]
TACGTCTAATGAGAAAGAATAGTACGATGAACGTTTAGACCAGCGAGTTCGGGATGATGGGAGCCGAATCTAAACATTATTGGAAGCGCGCTTTTGAAGACGACAATTCGATAATAAGTGGATGTCATATCAATTAGAGTGGTACCGCGGGCACGTCTCGTCTCTTACAT
# TF - MntR: lp_0996
>lp_1095(mntC) Score=5.2 Pos=-82 [Lactobacillus plantarum WCFS1]
AAGTTAACTGCACCTAACAA
>lp_2992(mntH) Score=5.3 Pos=-98 [Lactobacillus plantarum WCFS1]
TTTGTAGGCATACCTAAAAA
# RNA - T-box(Gly)
>lp_1965(glyQ) Score=65.8 Pos=-283 [Lactobacillus plantarum WCFS1]
TAGTTAAGTGTTGATGAGAGAAGGTTAACGGATTCGACTTACAGTGAGACCGTGATGGTGAAAAACGGTCAGTCAAAGTCGTTAATTGGCGCTTTCGGAGCTTTAATACCGTGTAATTAAGCTGCTGAGGTTACTCAGAAGTAGGGTGGAACCGCGAAACCAATCGTCCCTATG
# RNA - T-box(His)
>lp_2561(hisZ) Score=101.4 Pos=-408 [Lactobacillus plantarum WCFS1]
ATAAACGGTTGTGATTAGAACAAGTAATTAAGTCTTCCTCATCCAGAGAGCCCGGGTAGCTGAGAACCGGACAGACAGGCTTAACGAACACACATCTATGAACTGCTAAGGTGAACCAGTCTCATTAGCCTTAGCCGAATTGGTTTCGTTATCCAAGTTGACTTGATCAACATGAGGTCTGCCGTGCGAACGGTAGATGAAATAAGGTGGAACCACGCGTAAACGTCCTTTTA
# RNA - T-box(Ile)
>lp_2187(ileS) Score=97.1 Pos=-284 [Lactobacillus plantarum WCFS1]
ATTGAATGTATTGAGGAGAACAGCAAACAATTAACTAATACGCCCAGAGAGCTGCCGGCAATGGAAAGGCAGTCGTCCCTTAGTTAGTTGCAGATCATCTCTGAATGCTATCCTGAATTGAGTAAGGGTGGCCGGTCCATGGACGTTAACCATGCTAAGAGAGAATTTAAACAATTCTAAAATTGGGTGGTACCACGATAACTTCGTCCCTGGG
>lp_3466(brnQ) Score=87.8 Pos=-349 [Lactobacillus plantarum WCFS1]
CAAACACGCCGATGAACAAAGTAAACCTTCTGGAAATGCCTAGAGAGTGTCAGTTTGGTGCAATGACATCATGACCAGATCGTTGAAAATCAGTTCTGAGTGGCAGTGACGAGCTTGATGTTAGTTGCTGTTGGTTGCTCCCATTATTGAGCCGAAGTATCGCAAGTGGCCGGCCACTTGCCGTACTTTTTAAGGTGATTCGTCGTAAGGCAGTCACAAAGCTAAGGTGGTAACACGTGTTCAAACGTCCTGGTTTC
# RNA - T-box(Leu)
>lp_1316(leuS) Score=96.6 Pos=-348 [Lactobacillus plantarum WCFS1]
TTACGACTCTGAGAAGGAATAGTAGTGGCTGGTGTTTTGCAGAAACTCCGTGGTAGTTGCAAACGGGGATTCACCAATCATGAACTCACCTTCGAGTCTTCCGGCTGAACAAGATTGTAGGTACGGACGTGGTTTCGCGTTAAGATTCTCAAGAGGCCACGGTAACGTGGAATCATAGGTGGTACCGCGGAACCCGTTTTCGTCCTATAAGC
# RNA - T-box(Lys)
>lp_3686(oppA) Score=59 Pos=-321 [Lactobacillus plantarum WCFS1]
GATTAAGCGAACGGCAGTCGAGGAGTCGGTTATCAGTCAGTTACAGCGAGTCGCGGATGATGAAAAGCGATCTGAACTGGTAGCTAAAAGTCGATTACTAGTGAGAAGTTGCGTGAAGCAATTTCCGGGTGTACCCGATAACGTACCAACATATCGTCAATAAATTTGGCCGTATGTAAGTGGTGAGTCTGACTGGCTCGCAAATGAGGTGGTACCGCGTGAAGACGTCCTTTTA
# RNA - T-box(Met)
>lp_2537(metA) Score=70.6 Pos=-315 [Lactobacillus plantarum WCFS1]
GATTAAGACGTTGAAGAGAAGAGTAATCGCATCACTGATTTGCAGAGAGCTTCGTAATGGTGAGAGAAGTATTCAGGAGTGCGGTGAAGATGAGCTTGGAGTCATGATGCGGGTCGTAGTGGCTACGCATGCGGTGGCAACCGATATATTGCGGGGTTTCCTAGATTTTTCAGGGTACTCGTCGAGGTTGTGATCGTGAGATGGCAGCGAACAACGGTGGTAACGCGAAAGCTTTCGTCCGTTAG
>lp_1375(metE) Score=94.3 Pos=-303 [Lactobacillus plantarum WCFS1]
TGTAAACGTCCTGAAGAGGAAAGTAATCATCGCTACCCGTGCAGTGAGTTTGGAATAGTGCAAACCAAACCGGAAGACGATTGATGAAAAATGGCCTCCAAACGGCACCACTGAGCTTTTGCCAGGTGATGACAGTTAGCTACTGTTAATAAGCTTCCGTATGAAACGTACGGATTGAGGTCAATATCGTGAGGTGTTGACAAATTAAGGTGGTACCGCGAACGGCAACTTCGTCCTTTAA
>lp_2352(metN) Score=75.4 Pos=-303 [Lactobacillus plantarum WCFS1]
AGTTATCATTTTGAAAAGATGAGTACGCGGTTATGATTACTTAGAGAGTCCCTGATTGGTGAAAGGGGATTAATCGTGAAGCTGAAGATGGTCTTGAAGTAATGAAGTTTAGTGAGCAGTCGCAAGCTAAGCTTGGGTCGCACCCATTATCATGCGGAGTTCAAAGTAACTCTTGAGACAACTGGCGTGAGCTAGTTGTGAAGATGGGTGGTACCACGAGGCTAAGCTTCTCGTCCTATTG
>lp_1744(metN) Score=72.7 Pos=-318 [Lactobacillus plantarum WCFS1]
AATAAATACGTCTAAGATGAGTAGCCGTTGTTGGAATGCCTTAGAGAACTGCCGGTTGGTGCGAGGTAGCCATTTCGCAACGTTGAAGATGGTCTTATAATGCAAGTTTCAACGCTGAGCTGACGGGGTTAAGCGTTGACGGCTACGCCCGTTATGCGGTTAGAGTCTCGCTAAGAATTTTCAGTGGCGGTACTTGAAGTGCGGTGGCCTGTGAGGGTCATTTGAAGTAAGGTGGTAACACGGAAAAACGTCCATTCGTCCTTAATCT
>lp_3283(metE2) Score=77.7 Pos=-335 [Lactobacillus plantarum WCFS1]
AAAGAACGATTAAAAGATGAGTAATTGGTGTCGCTGTTCAGCGAGTATCGGGTTGGTGAAACGGTATCGGCACAACCAATGAAGATGGTCTTCTCCCTAGTTCGTTTTGGTGAGTGTCTGGTGATCAACAAAGTAACCAGCATTAACTAAAGCCGGTTTAACAACCGTTACCCGCGTTAGCAATTGCCAATCATTTGGCAGCTGTATCGAGTAGACTAGTTCACTAGCCTAGAACTCAGGTGGTACCACGGCCCAACGTCGTCCTGAATAA
>lp_0150(mtsA) Score=63.6 Pos=-315 [Lactobacillus plantarum WCFS1]
AGAAAAAGCTGTGACAAGATGAGTAAGCTAATTCTCGTGCTTAGAGAGTCGTATTTTTGGTGCAAAACGATGACGTGGTTAGTTGAAGATGGTCTTGAAGAAGCTACTGGGGCCATCTCAGTCGGAGCGATCCGTTACGATCATGATAAGTCCCTGTGGGAAAATCTCGGTGGTAACACGCAAACGCGTCCTAGAA
>lp_2634(metI) Score=68.8 Pos=-319 [Lactobacillus plantarum WCFS1]
AAATAACATGTTGATGAGAAGAGTAGTCAGGTTATACCTTTGACAGGGAGCCGTGGGGAGTGTAAAGCGGTAAGGTAGCGCCTGATGAAGATGAACTCGGAATGCCCAGTTGCGGTCGCAAGGCTGTACTGGCGGGACTGGCCGATACTCCAGTGAGTCAATAATGACTTGATGAGTTTAACGGGGTGACCCGTAATTGAACTTGGGTGGTAACACGCGACCGGCGTCCCTTGA
# RNA - T-box(Phe)
>lp_1558(pheS) Score=94.3 Pos=-280 [Lactobacillus plantarum WCFS1]
TAAAAGCCTTGACGAGAAATAGTAGTTAGTTACGGCGTCGTAGGGACGGGTGTCACCGATTGAAAGCACCCTGGCGACCAAGATTGACGAATTCACTCTCTGAGCTGAAATTGGGCGTTTGTGTAAACAAATAATTTTCCGGTATCCCGACCGTTATGACGGGTAGTGAGTGTGCATAGTGACTACTATGCAAACAAGGGTGGTACCGCGATGACCTCGTCCCTTTTCA
# RNA - T-box(Ser)
>lp_1012(serS) Score=60.4 Pos=-240 [Lactobacillus plantarum WCFS1]
TAAACACGGCGCGTTTTTAAGTAGACGTTCAGAGAACCGGTGGGTGGTGTGAATCGGTAGTCGAAACTCCGGCGCGACAATGTGGGCAGGTAATACTGCACGGCACGGCCGTTATCCGTTTAAGGGTGGGATTAATCATGATCCTGAACTTGGGTGGTACCGCGAATCGCAGTCTCTTCGTCCCAATTGG
>lp_0501(serS) Score=70.2 Pos=-240 [Lactobacillus plantarum WCFS1]
AAAGCGCAAACATAATGGGCTAGTAGTTAATCTGGTTATTTAGAAAGCCAACGGTTGCTGAAAGTTGGTTGATTGGACTGATGAATCCGCCATTTAGCGTTTGACTTCATTTTTAAGAGGTCGCGGTGAGACGATATACTCGTAGAGCAGTAAATTGGGTGGTACCACGTTGATAAAAAACGTCCCATAGTC
# RNA - T-box(Thr)
>lp_1514(thrS) Score=65.3 Pos=-295 [Lactobacillus plantarum WCFS1]
GAAAACAGATGCAAAAGACACGCTTTGTTTACCATGGATTGCAGAGACCAAGACCTTGTTCTGGAAGTCTTGGACCGGGTTTACGAAGATACCACTTTTGTGAACATGCTCAATTGAGCCGGAACGCTTCCGTTATTAGCGCTAATGAGTCAGTGTCTTTGATGACACTGAAAAATCGGGTGGAACCACGTCAATGACGTCCCTAATGC
# RNA - T-box(Trp)
>lp_0092(oppA) Score=84.1 Pos=-396 [Lactobacillus plantarum WCFS1]
TTATAAACCAATGAGGTGGAGATCAAGATTATCGTGCCCGCACAGAGAGTCATCGTTGCTGAGAGTATGGCCGAACGCAGGTAATTAAATGGACCACCGAGGGCTTTGCCGAAATTAACGTCAGTTGAGAGTACGGAAAGACGTGCGACATACGTCAGTTGTCAGGGAAATGTTAGTTTCCTATGGAGTAGGAGTGTACGCGTGATTTAATCACTAAATTGGCGAACACTCAATTAAGGTGGCACCGCGGTTATCAAACCGTCCTTAAC
>lp_0434(trpS) Score=84.8 Pos=-246 [Lactobacillus plantarum WCFS1]
ATTAATCGTTGAAGAAAAGAACAGTAAGGCGTCCAATAACAGAGACCTAGCGCGTGCTGAAAGCTGGGGCGGACTAATGAATTGGCTTTTTGGAGATTCGGTGAACACCGGGGACCCACCCTTATCGGTCAATGAGTGGCAGAGACAAGCTTTCTGCAATTTAGGTGGTACCACGGTGATGCGTCCTAATTAA
>lp_1652(trpE) Score=77.7 Pos=-372 [Lactobacillus plantarum WCFS1]
TGAAACCGATGAAGTGGAGATCAAGATAATGATGCCCGTAAAGAGAGTCGCCGTTGCTGAGAGTGCGATCGAACGCAAATTATTAAATGGACCACTGAGGGCGCGACTAACGAACAGTTTTGTTCTACTACCTCGCGACGATAGGGAGCCGTCAATTCCCGGGAATGTGTTTGCATTTCGCTAAGCTGGGACCCAAGTCTAACCTGAATGGGGTAATTTGGTGTCCAACCAAGGTGGTACCGCGGAAAAATCCGTCCTTGACTG
# RNA - T-box(Tyr)
>lp_3338(tyrT) Score=76.1 Pos=-362 [Lactobacillus plantarum WCFS1]
TAACTGTACGATAACGTTACATCAAGTAGACATAGTGGTAGGTGTCAGGAAGCCGGTGGTTGCTGCGAACCGGTCAGCTACTATGATTGAAATACGGTAACCGAGTTTCGACTGAACGGATAATAACTAGAACCGTTATCTTCTAGTGAGTGGTGGATTAAGTGTCAATAATCCGCAACCTGGGTGGTACCGCGACTAGTCTAATCGTCCCTGTT
>lp_0192(tyrT) Score=65.3 Pos=-340 [Lactobacillus plantarum WCFS1]
ATAACGAACGATAATCTTACTTTCAAGTAGCGAATTAACTGTGCGTCAGGAAGTCGGTGGGTGCTGCGAACCGATCAGGTTAATCTCGATGAAATACGGTAGGAGAGGTCCGGGTACGCCCGGCGGATAACAACTAGAGCCGTTAACTGCTAGTGAGTGGAGTCATATTGTGGCTCAAGCTGGGTGGTACCACGGTCTAATCAATCGTCCCTGTT
>lp_2807(tyrS) Score=106.1 Pos=-249 [Lactobacillus plantarum WCFS1]
TTAAAAAGTAGTGATCGTTAATTAGTAGTCGTTGACCCAACAGTCTAGCGACTCGGTGGGTGGTGCGAACCGAGCTGTGGTCAAAGATGAATTACATAACGTGAACTGCCATTGGCCGGATGATATCCGTTACTAATCAATGAGCGATCACATTTGGTGATAACTTGGGTGGTAACGCGGAAAACTCGTCCCTGTT
# RNA - T-box(Val)
>lp_2322(valS) Score=109.8 Pos=-287 [Lactobacillus plantarum WCFS1]
ACAACCAGCAATGAGCAAGAGAGTAGCGATAAACAACGTCAACAGAGAGAGCGTGAACAGTGAAACACGCTTGGCGGTTTTAGCGTGAAGGTAGCTTGCGAGCTGCTATTCTGAACTGTTTTAGTAGGAATAGCCGGACGGGATACACCGTTCGTTAACAACGATGTTTAAGCTGTAAAGCGATCACTTGTGATGGCTTTAAAATTAGGTGGTACCGCGAAGTCCATTCGTCCTAGTC
>lp_0399(brnQ) Score=99.2 Pos=-444 [Lactobacillus plantarum WCFS1]
TAAACGTGATGATCAGGAGAGTAAAGTCAGGGTAATCTTAAGCGAGCCGCTGGATGGTGTGAAGCGGTGGTGAGCCTGGCTGGAAAGTAGCCTGAGAACTGCTAATGCGACGAGCTGGAGTGTTAGCTGGGTGCCCCCATTAACGGGCCAACGTATCGTCAGTTAACATTACTGTTTGGGGAAACCCGTCATCGGTGTTGGTAATTGGCCGTACGCGCAAAGGTGACGAGCTGCGGTTCGTGACGAATTAAGGTGGTACCACGCGTTAGCGTCCTTACAAA
# TF - NiaR: lp_2770
>lp_2770(niaR) Score=5.8 Pos=-121 [Lactobacillus plantarum WCFS1]
TTTAGATGTCTTGACACCTATG
>lp_2771(pncB) Score=5.8 Pos=-46 [Lactobacillus plantarum WCFS1]
CATAGGTGTCAAGACATCTAAA
# TF - GlnR: lp_1580
>lp_0802(glnP) Score=5.5 Pos=-54 [Lactobacillus plantarum WCFS1]
ATGTTATATTTTATGACAT
>lp_0349(nrgA) Score=6.2 Pos=-46 [Lactobacillus plantarum WCFS1]
ATGTTATAATTTCTAACAT
>lp_2830(ansB) Score=5.6 Pos=-44 [Lactobacillus plantarum WCFS1]
ATGTTAGAAGATATAACAT
>lp_1580(glnR) Score=5.4 Pos=-82 [Lactobacillus plantarum WCFS1]
GTGTGATATTTTCTAACAT
# TF - CopR: lp_3365
>lp_3363(copB) Score=5.9 Pos=-43 [Lactobacillus plantarum WCFS1]
TAAATTACAGATGTAGACAA
>lp_3363(copB) Score=4.7 Pos=-69 [Lactobacillus plantarum WCFS1]
TCGTCTACAATTGTAAACTT
>lp_3365(copR) Score=5.2 Pos=-52 [Lactobacillus plantarum WCFS1]
ACGTTTACGGTTGTAAACTA
# TF - ScrR: lp_0188
>lp_0187(scrB) Score=6 Pos=-171 [Lactobacillus plantarum WCFS1]
TATGTCAAGCGTTTGATACA
>lp_0187(scrB) Score=6.4 Pos=-82 [Lactobacillus plantarum WCFS1]
AATGTCAAACGATTGACATA
>lp_0185(scrA) Score=6.5 Pos=-193 [Lactobacillus plantarum WCFS1]
TATGTCAATCGTTTGACATT
>lp_0185(scrA) Score=6.1 Pos=-104 [Lactobacillus plantarum WCFS1]
TGTATCAAACGCTTGACATA
# TF - MalR: lp_0172
>lp_1729(malT) Score=6.3 Pos=-87 [Lactobacillus plantarum WCFS1]
TCACGCAAACGCTTGCATAA
>lp_0175(malX) Score=6 Pos=-86 [Lactobacillus plantarum WCFS1]
TTACGAAAACGCTTGCGAAA
>lp_0175(malX) Score=4.9 Pos=-74 [Lactobacillus plantarum WCFS1]
TTGCGAAAGCGTTTGCACAG
>lp_0172(malR) Score=6.2 Pos=-77 [Lactobacillus plantarum WCFS1]
TTATGCAATCGCTTGCAATA
# TF - DeoR: lp_0495
>lp_0497(deoC) Score=5.4 Pos=-21 [Lactobacillus plantarum WCFS1]
AAGAAAGGGGTTTCAT
# TF - MurR: lp_3521
>lp_3524(murX) Score=5.5 Pos=-110 [Lactobacillus plantarum WCFS1]
AAGTAATTTAGTTTCTT
# TF - CggR: lp_0788
>lp_0788(cggR) Score=6.7 Pos=1 [Lactobacillus plantarum WCFS1]
TGCATTCAGATATTCAATGGATTGAGGCAATTGCCCC
# TF - PflR: lp_2597
>lp_2596(pflA) Score=5.7 Pos=-84 [Lactobacillus plantarum WCFS1]
TACTTTCGTTTGAAATTA
>lp_2597(pflR) Score=5.4 Pos=-69 [Lactobacillus plantarum WCFS1]
TAATTTCAAACGAAAGTA
>lp_2598(pflB) Score=5.7 Pos=-47 [Lactobacillus plantarum WCFS1]
TTATTACGTAAGAAAGTC
# TF - NrtR: lp_2515
>lp_2514(niaP) Score=5.8 Pos=-61 [Lactobacillus plantarum WCFS1]
TAAAGGTAAAAAATACCTAAA
# TF - PadR: lp_3079
>lp_3664(padR) Score=6.9 Pos=-80 [Lactobacillus plantarum WCFS1]
AATCATGTAATTTATTACATGTTT
>lp_3665(padC) Score=7.5 Pos=-59 [Lactobacillus plantarum WCFS1]
AAACATGTAATAAATTACATGATT
# TF - PerR: lp_3247
>lp_2544(npr) Score=5.1 Pos=-95 [Lactobacillus plantarum WCFS1]
TTAGAATAATTACAA
>lp_3327(cadA) Score=5.4 Pos=-93 [Lactobacillus plantarum WCFS1]
TTAGAATCATTCTTA
>lp_3247(perR) Score=4.8 Pos=-63 [Lactobacillus plantarum WCFS1]
TTGGAATCCTTCTAA
>lp_3247(perR) Score=5 Pos=-79 [Lactobacillus plantarum WCFS1]
TAGTAATGTTTCTAA
>lp_3225(ybbL) Score=6 Pos=-36 [Lactobacillus plantarum WCFS1]
TTATAATGATTCTAA
>lp_3360(pcl2) Score=5.6 Pos=-37 [Lactobacillus plantarum WCFS1]
TAATAATGATTATAA
>lp_0355(cueO) Score=5.6 Pos=-88 [Lactobacillus plantarum WCFS1]
TTAAAATAATTCTAA
# TF - TreR: lp_0262
>lp_0262(treR) Score=5.6 Pos=-59 [Lactobacillus plantarum WCFS1]
CAACTTGTCTAAACAAGTCT
# TF - RbsR: lp_3661
>lp_3660(rbsK) Score=6.2 Pos=-74 [Lactobacillus plantarum WCFS1]
TTATTAAAACGTTTTCATAA
>lp_3660(rbsK) Score=6.1 Pos=-61 [Lactobacillus plantarum WCFS1]
TTCATAAAACGTTTTAATAA
# TF - ArgR: lp_1411, lp_1604
>lp_0527(carA) Score=4.9 Pos=-169 [Lactobacillus plantarum WCFS1]
ATTGAAAAAATATTCATT
>lp_0775(argG) Score=4.1 Pos=-139 [Lactobacillus plantarum WCFS1]
TCTGCATAAAAATTCTAT
>lp_0528(argC) Score=4.5 Pos=-117 [Lactobacillus plantarum WCFS1]
AATGAATATTTTTTCAAT
>lp_2111(artPQ) Score=3.8 Pos=-17 [Lactobacillus plantarum WCFS1]
CTTGCATAAATAATCATA
# TF - GalR: lp_3488, lp_3479
>lp_3486(lacS2) Score=5.7 Pos=-88 [Lactobacillus plantarum WCFS1]
CAAATTTTACTAAAAATCA
>lp_3483(lacL) Score=5.9 Pos=-266 [Lactobacillus plantarum WCFS1]
ATAGTTTTACTAAAATTTT
>lp_3482(galK) Score=6 Pos=-36 [Lactobacillus plantarum WCFS1]
AAAATTTTAGTAAAACTAT
# TF - HrcA: lp_2029
>lp_2029(hrcA) Score=7.1 Pos=-191 [Lactobacillus plantarum WCFS1]
TTAGCACTCGTAAGTAAGGAGTGCTAA
>lp_0129(hsp) Score=7.5 Pos=-149 [Lactobacillus plantarum WCFS1]
TTAGCACTCGAGTTAAACGAGTGCTAA
>lp_0727(groS) Score=6.4 Pos=-51 [Lactobacillus plantarum WCFS1]
TTAGCACTTGAGGTTGAGGAGTGCTAA
>lp_2029(hrcA) Score=6.7 Pos=-36 [Lactobacillus plantarum WCFS1]
TTAGCACTCCATTAAGTTAAGTGCTAA
# TF - Zur: lp_0868
>lp_3302(znuA) Score=6.6 Pos=-44 [Lactobacillus plantarum WCFS1]
TTAACAGTAATGGTTACGATTTA
>lp_0463(znuC) Score=6.9 Pos=-51 [Lactobacillus plantarum WCFS1]
AAAATAGTAATCATTACGATTTA
>lp_3018(znuA) Score=6.8 Pos=-88 [Lactobacillus plantarum WCFS1]
TAAAACGTAAATATTACTATTTA
>lp_3018(znuA) Score=7.3 Pos=-39 [Lactobacillus plantarum WCFS1]
TAAAACGTAATGATTACTATTTA
>lp_2216(rpsN2) Score=5.6 Pos=-125 [Lactobacillus plantarum WCFS1]
AAAATAGTAGCTGTTACGATTTA
>lp_0947(lp_0947) Score=6.7 Pos=-36 [Lactobacillus plantarum WCFS1]
TAAATGGTAATAATTACTATTTA
>lp_0868(zur) Score=6.9 Pos=-56 [Lactobacillus plantarum WCFS1]
TAAATAGTAATGATTATGATTTA
# TF - NrdR: lp_1511
>lp_1329(dgk2) Score=3.9 Pos=-72 [Lactobacillus plantarum WCFS1]
AAAGTCTATATGGTAT
>lp_0694(nrdH) Score=4.6 Pos=-86 [Lactobacillus plantarum WCFS1]
ACCCTAGATGTTGTGT
>lp_1329(dgk2) Score=5.1 Pos=-40 [Lactobacillus plantarum WCFS1]
ATACAATATATTGTGC
>lp_1011(dgk1) Score=4.4 Pos=-99 [Lactobacillus plantarum WCFS1]
TCACCAGATATTGCAT
>lp_1011(dgk1) Score=5 Pos=-67 [Lactobacillus plantarum WCFS1]
GTACAATATGTAGTGT
>lp_2932(nrdD) Score=4.4 Pos=-49 [Lactobacillus plantarum WCFS1]
GCACTATCAATTGTAT
>lp_2932(nrdD) Score=5.5 Pos=-80 [Lactobacillus plantarum WCFS1]
CTACTATATATAGTAT
>lp_0259(pnuN) Score=5.7 Pos=-108 [Lactobacillus plantarum WCFS1]
ATACAATATATTGTGT
>lp_0259(pnuN) Score=4.8 Pos=-78 [Lactobacillus plantarum WCFS1]
ACACTACATGTAGTAG
>lp_0694(nrdH) Score=4.7 Pos=-54 [Lactobacillus plantarum WCFS1]
TCACCACATGTTGTAT
# TF - MtaR: lp_1857
>lp_1856(yxjH) Score=6.3 Pos=-104 [Lactobacillus plantarum WCFS1]
TATAGGTATTGCCTATT
>lp_1857(mtaR) Score=6.3 Pos=-102 [Lactobacillus plantarum WCFS1]
AATAGGCAATACCTATA
# TF - CcpB: lp_2602
>lp_2602(ccpB) Score=5 Pos=-92 [Lactobacillus plantarum WCFS1]
CTGGTACCGGTTTCAC
# TF - LacR: lp_3470
>lp_3469(lacZ) Score=5.6 Pos=-108 [Lactobacillus plantarum WCFS1]
GATATTTAGTAATTATT
>lp_3470(lacR) Score=5.6 Pos=-155 [Lactobacillus plantarum WCFS1]
AATAATTACTAAATATC
# TF - MdxR: lp_0173
>lp_2757(nplT) Score=5.8 Pos=-34 [Lactobacillus plantarum WCFS1]
TAATGTAATCGTTTACATAA
>lp_0175(malX) Score=6.3 Pos=-103 [Lactobacillus plantarum WCFS1]
TTCTGTTAACGTTAACATTA
# TF - MalR3: lp_3531, lp_3625
>lp_3627(nplT) Score=6.3 Pos=-52 [Lactobacillus plantarum WCFS1]
TTAAGCAAACGTTTGCTTAA
>lp_2757(nplT) Score=5.5 Pos=-34 [Lactobacillus plantarum WCFS1]
TAATGTAATCGTTTACATAA
>lp_3533(malT2) Score=5.5 Pos=-106 [Lactobacillus plantarum WCFS1]
AAGTGTAAACGTTTACTTTA
>lp_3533(malT2) Score=5.8 Pos=-74 [Lactobacillus plantarum WCFS1]
TATTGTAAACGTTTACGTTA
>lp_3531(malR3) Score=5.8 Pos=-115 [Lactobacillus plantarum WCFS1]
TAACGTAAACGTTTACAATA
>lp_3531(malR3) Score=5.5 Pos=-83 [Lactobacillus plantarum WCFS1]
TAAAGTAAACGTTTACACTT
# TF - GutR: lp_3622, lp_3656
>lp_3623(gutF) Score=7.6 Pos=-98 [Lactobacillus plantarum WCFS1]
TTTTCG---------GGAAAT
>lp_3657(gutF) Score=7.1 Pos=-39 [Lactobacillus plantarum WCFS1]
TTATCT---------AGAAAT
# TF - MtlR: lp_0231
>lp_0230(mtlA) Score=6.7 Pos=-104 [Lactobacillus plantarum WCFS1]
TGTGGCACAGTTTCCTGTGCCACG
# TF - FruR: lp_2095
>lp_2095(fruR) Score=5.2 Pos=-82 [Lactobacillus plantarum WCFS1]
TGGATTATTTTGACGGTTTT
>lp_2095(fruR) Score=5.7 Pos=-72 [Lactobacillus plantarum WCFS1]
TGACGGTTTTTGAAGGTTTT
# TF - CtsR: lp_1018
>lp_0786(clpP) Score=5.8 Pos=-92 [Lactobacillus plantarum WCFS1]
TTTCTTTTGACCTTCACTGACCTT
>lp_2029(hrcA) Score=5.9 Pos=-91 [Lactobacillus plantarum WCFS1]
AATACTTTGTCTTTCCTTGACTTT
>lp_1903(clpB) Score=6.5 Pos=-118 [Lactobacillus plantarum WCFS1]
AAATCCTTGACCTTGTTTGACCTT
>lp_1269(clpE) Score=-2.3 Pos=-93 [Lactobacillus plantarum WCFS1]
AAGGTCAACAAAGGTCAAAGAGCC
>lp_1018(ctsR) Score=-0.3 Pos=-41 [Lactobacillus plantarum WCFS1]
ATAGTCAATATTAGTCAAAGATAA
# TF - LexA: lp_2063
>lp_1840(parE) Score=4.9 Pos=-185 [Lactobacillus plantarum WCFS1]
GCGAACGTGTGTTTGC
>lp_2301(recA) Score=4.8 Pos=-90 [Lactobacillus plantarum WCFS1]
ACGAACTTTTGTTCGC
>lp_0308(srmB) Score=4.6 Pos=-52 [Lactobacillus plantarum WCFS1]
ACGAACAGATGTTTTA
>lp_3023(umuC) Score=4.9 Pos=-192 [Lactobacillus plantarum WCFS1]
AAGAACATATGTTCTT
>lp_2694(addB) Score=4.3 Pos=-32 [Lactobacillus plantarum WCFS1]
GAGAACGTTTGTTCAG
>lp_2280(dinP) Score=4.8 Pos=-85 [Lactobacillus plantarum WCFS1]
TTGAACGTATGTTCGT
>lp_0772(uvrB) Score=5 Pos=-146 [Lactobacillus plantarum WCFS1]
GCGAAAGTATGTTCGA
>lp_1899(dnaE) Score=4.3 Pos=-191 [Lactobacillus plantarum WCFS1]
TAGAACAACTGTTTGG
>lp_2063(lexA) Score=5 Pos=-81 [Lactobacillus plantarum WCFS1]
CCGAACATTTGTTTGA
# TF - BirA: lp_0854, lp_0337
>lp_0336(bioY) Score=7.7 Pos=-76 [Lactobacillus plantarum WCFS1]
ACAGTAACC----------------GGTTACTGT
>lp_0854(birA) Score=7.7 Pos=-158 [Lactobacillus plantarum WCFS1]
ATTGTACAC----------------GGTTACATT
>lp_0854(birA) Score=8.1 Pos=-55 [Lactobacillus plantarum WCFS1]
TTAGTTAAC----------------GTTAACTAA
# TF - Lp_2742: lp_2742
>lp_2739(lp_2739) Score=6.8 Pos=-59 [Lactobacillus plantarum WCFS1]
TTAGTTACATAAGTAATTAA
# TF - YtrA: lp_0325, lp_1959
>lp_1959(ytrA) Score=6.3 Pos=-49 [Lactobacillus plantarum WCFS1]
GTGTACTAGTTGTAGTAATACAC
# TF - YwzG: lp_3216
>lp_3216(ywzG) Score=7.1 Pos=-37 [Lactobacillus plantarum WCFS1]
ATACTATACGACGTATAATAT
# TF - GntR1: lp_1157
>lp_1251(gntZ) Score=6 Pos=-109 [Lactobacillus plantarum WCFS1]
AATGAAAATAATTTACAAA
>lp_1251(gntZ) Score=5.1 Pos=-77 [Lactobacillus plantarum WCFS1]
TATGTAAATAGTTTTATTA
# TF - MleR: lp_1116, lp_1115
>lp_1118(mleS) Score=5.4 Pos=-138 [Lactobacillus plantarum WCFS1]
TATTTAATATATTTATA
>lp_1116(mleR) Score=5.4 Pos=-53 [Lactobacillus plantarum WCFS1]
TATAAATATATTAAATA
# TF - FlpA: lp_3444, lp_1442
>lp_1442(flpA) Score=5.3 Pos=-31 [Lactobacillus plantarum WCFS1]
AAATTGACATAAATCAAGAA
>lp_3435(cadA) Score=6.1 Pos=-78 [Lactobacillus plantarum WCFS1]
AACTTGACGCCTATCAAGTT
>lp_3442(copZ) Score=6 Pos=-75 [Lactobacillus plantarum WCFS1]
TTCTTGACGGCCGTCAAGTT
>lp_3444(flpA) Score=6 Pos=-142 [Lactobacillus plantarum WCFS1]
AACTTGACGGCCGTCAAGAA
# TF - NihR: lp_0103
>lp_0103(nihR) Score=4.8 Pos=-148 [Lactobacillus plantarum WCFS1]
GTTAACAAATGTATAC
>lp_0104(PF09861) Score=4.8 Pos=-120 [Lactobacillus plantarum WCFS1]
GTATACATTTGTTAAC
# TF - FlrR: lp_3097
>lp_3097(flrR) Score=6.1 Pos=-95 [Lactobacillus plantarum WCFS1]
TGTTACACTTGTAACG
>lp_3098(flr) Score=6.1 Pos=-47 [Lactobacillus plantarum WCFS1]
CGTTACAAGTGTAACA
# RNA - SMK_box_riboswitch
>lp_1301(metK) Score=58.5 Pos=-102 [Lactobacillus plantarum WCFS1]
ATAGTTATGAGCCGTTCCCGAAAGGATAAGTTTAGCTTGTTCGACGAAGAATAAGTGATGCTTAGATGCCTTGTAACCGAAATTATCAAGGGGGAATTTATTGTGAG
# TF - YhcF: lp_2615
>lp_2615(yhcF) Score=6.1 Pos=-39 [Lactobacillus plantarum WCFS1]
ATTGTAATAGAAAAATAGAACACT
# TF - YdfD/YisV: lp_1407
>lp_1409(yisU) Score=8.6 Pos=-155 [Lactobacillus plantarum WCFS1]
TGGTTGG----------------TGGTTGG