# TF - NagR: lp_0563 329408 lp_0226 nagB 331323 lp_2531 nagE 331658 lp_2969 nagE 329694 lp_0562 nagA 329695 lp_0563 nagR 329921 lp_0822 glmS # TF - Lp_3221: lp_3221 331850 lp_3220 agl4 331849 lp_3219 scrT 331851 lp_3221 lp_3221 # TF - PurR: lp_0466 331473 lp_2729 purE 331472 lp_2728 purK 331471 lp_2727 purC 331470 lp_2726 purS 331469 lp_2725 purQ 331468 lp_2724 purL 331467 lp_2723 purF 331466 lp_2722 purM 331465 lp_2721 purN 331464 lp_2720 purH 331463 lp_2719 purD 331888 lp_3269 purB 331889 lp_3270 purA 331890 lp_3271 guaC 329941 lp_0848 pbuG 329614 lp_0466 purR 329615 lp_0467 glmU # TF - CcpA: lp_2256 330967 lp_2095 fruR 330968 lp_2096 fruB 330969 lp_2097 fruA 329993 lp_0913 coaA 329994 lp_0914 guaA 332146 lp_3589 spxB 329639 lp_0498 rbsP 329640 lp_0499 LAF_1741 329641 lp_0500 rbsK 329706 lp_0575 manL 329707 lp_0576 manM 329708 lp_0577 manN 329714 lp_0583 manO 332155 lp_3598 fucR 332180 lp_3627 nplT 332179 lp_3626 melB2 332178 lp_3625 malR3 329365 lp_0175 malX 329366 lp_0176 malC 329367 lp_0177 malD 329368 lp_0178 malA 332095 lp_3533 malT2 332096 lp_3534 agl3 332210 lp_3660 rbsK 332209 lp_3659 rbsD 332208 lp_3658 rbsU 329535 lp_0370 glpK 329536 lp_0371 glpD 329537 lp_0372 glpF 329591 lp_0439 gmuC 329592 lp_0440 bglA 331495 lp_2757 nplT 331299 lp_2502 pgi 332014 lp_3436 glpF2 331397 lp_2629 spxB 329419 lp_0242 ndk 329410 lp_0230 mtlA 329411 lp_0231 mtlR 329412 lp_0232 mtlF 329413 lp_0233 mtlD 330435 lp_1468 sufC 330436 lp_1469 sufD 330437 lp_1470 sufS 330438 lp_1471 sufA 330439 lp_1472 sufB 332092 lp_3529 licT 332153 lp_3596 rhaY 332152 lp_3595 rhaB 332151 lp_3594 rhaU 332150 lp_3593 rhaA 332149 lp_3592 rhaD 331867 lp_3240 treP 329438 lp_0262 treR 329439 lp_0263 treA 329440 lp_0264 treP 332000 lp_3418 pck 329986 lp_0904 licT 329987 lp_0905 bglP 329988 lp_0906 bglH 329345 lp_0152 lhv_0924 331791 lp_3133 glclP 331790 lp_3132 bglA2 331789 lp_3131 glcT 331859 lp_3229 glclP 331724 lp_3051 dhaT 331725 lp_3054 adhX 331101 lp_2256 ccpA 331516 lp_2781 pts20B 331515 lp_2780 pts20A 331514 lp_2778 bglA 331513 lp_2777 bglA 331755 lp_3092 gabD 331102 lp_2258 pepQ 330660 lp_1729 malT 330661 lp_1730 mapA 330662 lp_1731 galM 330285 lp_1273 ptsH 330286 lp_1274 ptsI 329376 lp_0187 scrB 329377 lp_0188 scrR 329378 lp_0189 agl4 332055 lp_3489 yghZ 332125 lp_3566 LVIS_0439 329375 lp_0185 scrA 331657 lp_2968 ydgI 329273 lp_0060 yxjF 329274 lp_0061 adc 329275 lp_0062 ydgI 331017 lp_2154 pdhA 331016 lp_2153 pdhB 331015 lp_2152 pdhC 331014 lp_2151 pdhD 332049 lp_3483 lacL 332050 lp_3484 lacM 332207 lp_3657 sorD 332206 lp_3656 srlM 332205 lp_3655 srlR 332204 lp_3654 srlA 332203 lp_3653 srlE 332202 lp_3652 srlB 332177 lp_3623 sorD 332176 lp_3622 srlM 332175 lp_3621 srlR 332174 lp_3620 srlA 332173 lp_3619 srlE 332172 lp_3618 srlB 332036 lp_3469 lacZ 332035 lp_3468 lacS 329872 lp_0764 pgm 332094 lp_3531 malR3 329942 lp_0849 spxB 329358 lp_0168 dhaK 329359 lp_0169 dhaL 329360 lp_0170 dhaM 329361 lp_0171 glpF2 332195 lp_3644 msmX 332194 lp_3643 msmY 332193 lp_3642 msmZ 332117 lp_3557 araE 332116 lp_3556 araB 332115 lp_3555 araD 332114 lp_3554 araA 329381 lp_0193 nplT 331689 lp_3011 bglB 331688 lp_3010 LBA0884 331333 lp_2544 hcaD # TF - AraR: lp_3558 332117 lp_3557 araE 332116 lp_3556 araK 332115 lp_3555 araD 332114 lp_3554 araA 332118 lp_3558 araR # RNA - L10_leader 329747 lp_0621 rplJ 329748 lp_0622 rplL # RNA - TPP 329402 lp_0219 ykoE 329401 lp_0218 ykoD 329400 lp_0217 ykoC 329312 lp_0113 thiM 329313 lp_0114 thiD 329314 lp_0115 thiE 329315 lp_0116 cytX # RNA - FMN 330790 lp_1887 ribU # RNA - PyrR 331454 lp_2704 pyrR 331195 lp_2371 pyrP 331453 lp_2703 pyrB 331452 lp_2702 pyrC 331451 lp_2701 carA 331450 lp_2700 carB 331449 lp_2699 pyrD 331448 lp_2698 pyrF 331447 lp_2697 pyrE 330706 lp_1782 pyrR 330707 lp_1783 carA # RNA - L13_leader 330121 lp_1077 rplM 330122 lp_1078 rpsI # RNA - L19_leader 330588 lp_1640 rplS # RNA - L20_leader 330479 lp_1515 infC 330480 lp_1516 rpmI 330481 lp_1517 rplT # RNA - L21_leader 330543 lp_1592 rplU 330544 lp_1593 ysxB 330545 lp_1594 rpmA # RNA - Lysine 330068 lp_1008 lysP # RNA - PreQ1 329669 lp_0533 queT 331551 lp_2825 iunH 331550 lp_2824 qrtT # RNA - Purine 331935 lp_3334 adeC 331456 lp_2710 pbuX # TF - Rex: lp_0725 331724 lp_3051 dhaT 332022 lp_3449 noxE 332212 lp_3662 adhE # RNA - glmS 329921 lp_0822 glmS # RNA - ykoK 330953 lp_2077 lp_2077 330952 lp_2076 lp_2076 330951 lp_2075 lp_2075 # RNA - yybP-ykoY 329699 lp_0567 atcL # RNA - T-box(Ala) 331121 lp_2277 alaS # RNA - T-box(Asn) 330029 lp_0957 asnA 330028 lp_0956 asnS # RNA - T-box(Asp) 330873 lp_1981 hisS 330872 lp_1980 aspS # RNA - T-box(Arg) 330373 lp_1391 argS # TF - MntR: lp_0996 330136 lp_1095 mntC 330137 lp_1096 mntB 330138 lp_1097 mntA 331675 lp_2992 mntH # RNA - T-box(Gly) 330858 lp_1965 glyQ 330857 lp_1964 glyS # RNA - T-box(His) 331346 lp_2561 hisZ 331345 lp_2560 hisG 331344 lp_2559 hisD 331343 lp_2558 hisB 331342 lp_2557 hisH 331341 lp_2556 hisA 331340 lp_2554 hisF 331339 lp_2553 hisI 331338 lp_2552 hisE 331337 lp_2551 hisC # RNA - T-box(Ile) 332034 lp_3466 brnQ 331042 lp_2187 ileS # RNA - T-box(Leu) 330316 lp_1316 leuS # RNA - T-box(Lys) 332230 lp_3686 oppA # RNA - T-box(Met) 330363 lp_1375 metE 330362 lp_1374 metF 331179 lp_2352 metN 331178 lp_2351 metP 331177 lp_2350 metQ 331328 lp_2537 metA 331327 lp_2536 metY 331326 lp_2535 hom 331401 lp_2634 metI 331898 lp_3283 metE2 330674 lp_1744 metN 330675 lp_1745 metP 330676 lp_1746 metQ 329343 lp_0150 mtsA 329342 lp_0149 mtsB 329341 lp_0148 mtsC # RNA - T-box(Phe) 330515 lp_1558 pheS 330516 lp_1559 pheT # RNA - T-box(Ser) 330071 lp_1012 serS 329642 lp_0501 serS # RNA - T-box(Thr) 330478 lp_1514 thrS # RNA - T-box(Trp) 330594 lp_1652 trpE 330595 lp_1653 trpG 330596 lp_1654 trpD 330597 lp_1655 trpC 330598 lp_1656 trpF 330599 lp_1657 trpB 330600 lp_1658 trpA 329587 lp_0434 trpS 329299 lp_0092 oppA # RNA - T-box(Tyr) 331538 lp_2807 tyrS 331937 lp_3338 tyrT 329380 lp_0192 tyrT # RNA - T-box(Val) 329557 lp_0399 brnQ 331154 lp_2322 valS # TF - NiaR: lp_2770 331507 lp_2770 niaR 331508 lp_2771 pncB # TF - GlnR: lp_1580 331556 lp_2830 ansB 329903 lp_0802 glnP 329904 lp_0803 glnQ 329516 lp_0349 nrgA 330534 lp_1580 glnR 330535 lp_1581 glnA # TF - CopR: lp_3365 331958 lp_3365 copR 331957 lp_3363 copB # TF - ScrR: lp_0188 329375 lp_0185 scrA 329374 lp_0184 scrK 329376 lp_0187 scrB 329377 lp_0188 scrR 329378 lp_0189 agl4 # TF - MalR: lp_0172 329365 lp_0175 malX 329366 lp_0176 malC 329367 lp_0177 malD 329368 lp_0178 malA 329362 lp_0172 malR 329363 lp_0173 mdxR 329364 lp_0174 agl1 330660 lp_1729 malT 330661 lp_1730 mapA 330662 lp_1731 galM # TF - DeoR: lp_0495 329638 lp_0497 deoC 329639 lp_0498 lp_0498 329640 lp_0499 LAF_1741 329641 lp_0500 rbsK1 # TF - MurR: lp_3521 332088 lp_3524 murX 332087 lp_3523 murQ 332086 lp_3522 murP 332085 lp_3521 murR 332084 lp_3520 murO # TF - CggR: lp_0788 329891 lp_0788 cggR 329892 lp_0789 gap 329893 lp_0790 pgk 329894 lp_0791 tpiA 329895 lp_0792 enoA1 # TF - PflR: lp_2597 331373 lp_2596 pflA 331374 lp_2597 pflR 331375 lp_2598 pflB # TF - NrtR: lp_2515 331310 lp_2514 niaP # TF - PadR: lp_3079 332215 lp_3665 padC 332214 lp_3664 padR # TF - PerR: lp_3247 329521 lp_0355 cueO 331955 lp_3360 pcl2 331954 lp_3359 pcl1 331333 lp_2544 npr 331855 lp_3225 ybbL 331854 lp_3224 ybbM 331930 lp_3327 cadA 331873 lp_3247 perR # TF - TreR: lp_0262 329438 lp_0262 treR 329439 lp_0263 treA 329440 lp_0264 treP # TF - RbsR: lp_3661 332210 lp_3660 rbsK 332209 lp_3659 rbsD 332208 lp_3658 rbsU # TF - ArgR: lp_1411, lp_1604 330983 lp_2111 artPQ 330982 lp_2110 artM 329881 lp_0775 argG 329882 lp_0776 argH 329664 lp_0528 argC 329665 lp_0529 argJ 329666 lp_0530 argB 329667 lp_0531 argD 329668 lp_0532 argF 329663 lp_0527 carA 329662 lp_0526 carB # TF - GalR: lp_3488, lp_3479 332049 lp_3483 lacL 332050 lp_3484 lacM 332052 lp_3486 lacS2 332051 lp_3485 melA 332048 lp_3482 galK 332047 lp_3481 galE 332046 lp_3480 galT 332045 lp_3479 galR # TF - HrcA: lp_2029 330912 lp_2029 hrcA 330911 lp_2028 grpE 330910 lp_2027 dnaK 330909 lp_2026 dnaJ 329840 lp_0727 groS 329841 lp_0728 groL 329327 lp_0129 hsp # TF - Zur: lp_0868 331915 lp_3302 znuA 329612 lp_0463 znuC 329613 lp_0464 znuB 331696 lp_3018 znuA 331064 lp_2216 rpsN2 330020 lp_0947 lp_0947 329957 lp_0868 zur # TF - NrdR: lp_1511 331632 lp_2932 nrdD 331631 lp_2931 nrdG 329813 lp_0694 nrdH 329812 lp_0693 nrdE 329811 lp_0692 nrdF 329435 lp_0259 pnuN 330070 lp_1011 dgk1 330327 lp_1329 dgk2 # TF - MtaR: lp_1857 330763 lp_1856 yxjH 330764 lp_1857 mtaR # TF - CcpB: lp_2602 331379 lp_2602 ccpB 331378 lp_2601 ywbB # TF - LacR: lp_3470 332037 lp_3470 lacR 332036 lp_3469 lacZ 332035 lp_3468 lacS # TF - MdxR: lp_0173 331495 lp_2757 nplT 329365 lp_0175 malX 329366 lp_0176 malC 329367 lp_0177 malD 329368 lp_0178 malA # TF - MalR3: lp_3531, lp_3625 331495 lp_2757 nplT 332094 lp_3531 malR3 332095 lp_3533 malT2 332096 lp_3534 agl 332180 lp_3627 nplT 332179 lp_3626 malT2 332178 lp_3625 malR3 # TF - GutR: lp_3622, lp_3656 332207 lp_3657 gutF 332206 lp_3656 gutR 332205 lp_3655 gutM 332204 lp_3654 gutC 332203 lp_3653 gutB 332202 lp_3652 gutA 332177 lp_3623 gutF 332176 lp_3622 gutR 332175 lp_3621 gutM 332174 lp_3620 gutC 332173 lp_3619 gutB 332172 lp_3618 gutA # TF - MtlR: lp_0231 329410 lp_0230 mtlA 329411 lp_0231 mtlR 329412 lp_0232 mtlF 329413 lp_0233 mtlD # TF - FruR: lp_2095 330967 lp_2095 fruR 330968 lp_2096 fruB 330969 lp_2097 fruA # TF - CtsR: lp_1018 330072 lp_1018 ctsR 330073 lp_1019 clpC 330284 lp_1269 clpE 330912 lp_2029 hrcA 330911 lp_2028 grpE 330910 lp_2027 dnaK 330909 lp_2026 dnaJ 329889 lp_0786 clpP 330803 lp_1903 clpB # TF - LexA: lp_2063 329878 lp_0772 uvrB 329879 lp_0773 uvrA 331445 lp_2694 addB 331444 lp_2693 addA 330944 lp_2063 lexA 330800 lp_1899 dnaE 331137 lp_2301 recA 330751 lp_1840 parE 330750 lp_1839 parC 331701 lp_3023 umuC 331700 lp_3022 lp_3022 329480 lp_0308 srmB 329479 lp_0307 lp_0307 329478 lp_0306 lp_0306 331124 lp_2280 dinP 331123 lp_2279 nrnA 331122 lp_2278 rheB # TF - BirA: lp_0854, lp_0337 329506 lp_0336 bioY 329507 lp_0337 birA 329508 lp_0338 yemC 329946 lp_0854 birA # TF - Lp_2742: lp_2742 331481 lp_2739 lp_2739 331482 lp_2740 lp_2740 331483 lp_2741 lp_2741 331484 lp_2742 lp_2742 331485 lp_2743 lp_2743 331486 lp_2744 lp_2744 # TF - YtrA: lp_0325, lp_1959 330852 lp_1959 ytrA 330851 lp_1958 ytrB 330850 lp_1957 null 330849 lp_1956 null # TF - YwzG: lp_3216 331846 lp_3216 ywzG 331847 lp_3217 lp_3217 331848 lp_3218 lp_3218 # TF - GntR1: lp_1157 330269 lp_1251 gntZ 330268 lp_1250 gntK 330267 lp_1249 gntP # TF - MleR: lp_1116, lp_1115 330154 lp_1116 mleR 330155 lp_1118 mleS 330156 lp_1119 mleP # TF - FlpA: lp_3444, lp_1442 332013 lp_3435 cadA 332018 lp_3442 copZ 332017 lp_3441 dps 330413 lp_1442 flpA 332019 lp_3444 flpA # TF - NihR: lp_0103 329307 lp_0104 PF09861 329308 lp_0105 PF00731 329306 lp_0103 nihR 329305 lp_0102 nikM 329304 lp_0101 nikQ 329303 lp_0100 nikO # TF - FlrR: lp_3097 331760 lp_3097 flrR 331761 lp_3098 flr # RNA - SMK_box_riboswitch 330307 lp_1301 metK # TF - YhcF: lp_2615 331388 lp_2615 yhcF 331387 lp_2614 yhcG 331386 lp_2613 yhcI # TF - YdfD/YisV: lp_1407 330388 lp_1409 yisU