# TF - CymR: Cbei_1748
>Cbei_4193(sbpA) Score=5.8 Pos=-98 [Clostridium beijerincki NCIMB 8052]
AAAATCCTACTAAACATATATGAATAT
>Cbei_4194(sbpA) Score=5.3 Pos=-170 [Clostridium beijerincki NCIMB 8052]
TAATTCCCATTGAAATAATAGGAATTA
>Cbei_4344(tcyP) Score=5.3 Pos=-48 [Clostridium beijerincki NCIMB 8052]
ATAAATATACTAATTATATAGGAATTG
>Cbei_0629(mccB) Score=5.7 Pos=-140 [Clostridium beijerincki NCIMB 8052]
TAAAACACAGTAAACAAATAAGAATAA
# TF - ArgR: Cbei_1709
>Cbei_4515(argG) Score=4.7 Pos=-165 [Clostridium beijerincki NCIMB 8052]
ATGAATATTTTTTCAT
>Cbei_4515(argG) Score=4.8 Pos=-122 [Clostridium beijerincki NCIMB 8052]
CTGTATAATTATAAAC
>Cbei_4515(argG) Score=4.8 Pos=-46 [Clostridium beijerincki NCIMB 8052]
ATGTATGTTTATGCAT
>Cbei_4781(artP) Score=4.7 Pos=-240 [Clostridium beijerincki NCIMB 8052]
TTTTATAATTTTAAAA
>Cbei_4781(artP) Score=4.9 Pos=-104 [Clostridium beijerincki NCIMB 8052]
ATGAATAATAATTAAA
>Cbei_4781(artP) Score=4.6 Pos=-70 [Clostridium beijerincki NCIMB 8052]
TTGAGTAAATATAAAA
>Cbei_4781(artP) Score=4.6 Pos=-50 [Clostridium beijerincki NCIMB 8052]
GTGTATAATTATGCTA
# TF - LexA: Cbei_2561
>Cbei_1216(recA) Score=5.1 Pos=-38 [Clostridium beijerincki NCIMB 8052]
TAGAACATAAGTTCGA
>Cbei_0030(Cbei_0030) Score=4.7 Pos=-61 [Clostridium beijerincki NCIMB 8052]
GTGAACATATGTTCTG
>Cbei_0030(Cbei_0030) Score=4.8 Pos=-32 [Clostridium beijerincki NCIMB 8052]
ATGAACATATGTTTGC
>Cbei_2561(lexA) Score=4.3 Pos=-68 [Clostridium beijerincki NCIMB 8052]
TAGAACACAAGTTTGC
>Cbei_4864(uvrB) Score=4.3 Pos=-31 [Clostridium beijerincki NCIMB 8052]
ACGAATGTCTGTTCGG
>Cbei_0879(PF06114) Score=4.7 Pos=-65 [Clostridium beijerincki NCIMB 8052]
TTGAACATACGTTCTT
# TF - HrcA: Cbei_0828
>Cbei_0828(hrcA) Score=7.6 Pos=-44 [Clostridium beijerincki NCIMB 8052]
TTAGCACTCGAGGTTAATGAGTGCTAA
>Cbei_0328(groES) Score=7.6 Pos=-75 [Clostridium beijerincki NCIMB 8052]
TTAGCACTCGACAATGATGAGTGCTAA
# RNA - Cobalamin
>Cbei_2309(cbiK) Score=79.3 Pos=-449 [Clostridium beijerincki NCIMB 8052]
ATAAGAAATGATTTTTAGGTTCATATAAAGTTAAGTGTATATGATTAAAAGGGAAAGTGGTTAAAATCCACTACAGCCCCCGCTACTGTGATGGAAGACTAATCTCTAAAGTATATAATAAAAGTGCTCATTAATTAAGAATTGGCTGCTTTTAAATAGTATACTAAAAAATCCACTGAGAAATTTTCTTGGGAAGGAAGAGAATTAGGATGAGGCCAAAGTCAGGAGACCTGCCTAGGAGTTTATAAAAATGCT
# RNA - FMN
>Cbei_1224(ribD) Score=111.3 Pos=-447 [Clostridium beijerincki NCIMB 8052]
GAAATCTTCGGGGTTGGGTGAAATTCCCTATCGGCGGTACAGCCCGCGAGCTTTAAAAAGCAGATTCGGTTAGATTCCGAAGCCGACAGTAAAGTCTGGATGAAAGAAGAGAGTAAT
>Cbei_0464(ribU) Score=121.2 Pos=-306 [Clostridium beijerincki NCIMB 8052]
TATATCTTCAGGGCAGGGTGTAAATCCCTACCGGCGGTATAGCCCGCGAGCTTTTAAGAAAGCAGATTCGGTGTAACTCCGAGGCCGACAGTATAGTCTGGATGAAAGAAGGTAACCTA
# TF - NrtR: Cbei_2075
>Cbei_2075(nrtR) Score=5.6 Pos=-69 [Clostridium beijerincki NCIMB 8052]
ATAGAATCAAATTGATATTAT
# TF - CzrA: Cbei_1448
>Cbei_1448(czrA) Score=6.9 Pos=-44 [Clostridium beijerincki NCIMB 8052]
CGTATGAACAGATATTCATATG
# RNA - GEMM_RNA_motif
>Cbei_0874(Cbei_0874) Score=65.2 Pos=-433 [Clostridium beijerincki NCIMB 8052]
ATATCAATAGGCACACTTATTGAAAAATAGGGTCGCAAAGCTATGAGTCTAAGGAAAAATTTAATTTTCTATGATTGTCAGGTTGCCAAAAT
>Cbei_4273(motA) Score=68.6 Pos=-260 [Clostridium beijerincki NCIMB 8052]
TAAATGTTACTAGCACACTTATTGAAAGATAAGGCCGCAAAGCCATGAGTCTAAGGGAATTTACATTTCTATGATTGTCAGGTTGCCAAA
>Cbei_4033 Score=71.8 Pos=-229 [Clostridium beijerincki NCIMB 8052]
GTATTGATAATAGCACACTTGCCGAAAGGTAGGGCCGCAAAGCTATGGGTCTAAAGAAATTCATTTTCAATGATTGCCAGGTTGCCAAA
>Cbei_0537(cheY) Score=62.2 Pos=-120 [Clostridium beijerincki NCIMB 8052]
TATTGAATTGGCAAAGCAGTTGAAAAACTGTGACGCAAAGCTAGAGGGCCTTTTCCTTTTGAAAGGATGGCAGCCAGTTGCAAGTCT
# RNA - Glycine
>Cbei_3972(aroP) Score=52.6 Pos=-220 [Clostridium beijerincki NCIMB 8052]
ACCTTGGAGAGACTCGAAAAGAGCACCGAAGGAGAAAGCTGTAAAGGCGAAACTCTCAGGTAAAAGGACAGGG
>Cbei_3972(aroP) Score=47.2 Pos=-316 [Clostridium beijerincki NCIMB 8052]
GATGAAGATAGCGGGAGAGTAATGGCTATGGTCATTCACCGAAGAAGTAAATCTTTCAGGTACCTATTTAATTAGAGATGACCGCTATTGGATG
>Cbei_2529(COG2860) Score=39.1 Pos=-155 [Clostridium beijerincki NCIMB 8052]
CTGACGAAACTCTGGAAAGTCTTATGACACCCAAGAAGCAATCTTTTTAGTTAACTATTAAAAGAGAATCTTTCAGGTAAAATAACAGAGGCGAATTG
>Cbei_2529(COG2860) Score=48.4 Pos=-237 [Clostridium beijerincki NCIMB 8052]
TGTGACGAATTTGGGAGATGCTACAAGCAATGTAGAGCCGAAGGTGAAATCGCAACAAACTCTCAGGCAAAGGGACCGAATTC
# RNA - L10_leader
>Cbei_0142(rplJ) Score=72.4 Pos=-158 [Clostridium beijerincki NCIMB 8052]
AAAAGAAAATATTTTTTCCGTAGACAGTGGGTGCGAAAGCGTAAAGTATAACTGCCCGCCTAGGTATATAATAGATTGTATTATAGGCCTTCCATGTCTGCGGAAGGTCTTTTTTAATAAAAGAAG
# RNA - L19_leader
>Cbei_1180(rplS) Score=27.3 Pos=-64 [Clostridium beijerincki NCIMB 8052]
GGGCGTTCCGCTGTCATACATATGTGTTAAGAACGTCAAAT
# RNA - L20_leader
>Cbei_1569(infC) Score=42.8 Pos=-104 [Clostridium beijerincki NCIMB 8052]
ATGTTAAGAAGAAACAGCCGTTTCTCACCCTGCAGTGTTGAATTTACTAGTATGGGTTTTATGTGTGTCTATACATTGAGTATTGATAATTTGAGGCGGCAGTTATGCCGTCTTTTTATTATGTATAT
# RNA - Lysine
>Cbei_4787(lysA) Score=86.1 Pos=-487 [Clostridium beijerincki NCIMB 8052]
GACCTGGGGTAGAGGTGCTGCAATAAATAGTAGGTATGAGGAGTTGGCAAACGTTGATTTATACTAAAAGGTATTACAGCCGAAGAAAATAGATTATTATGCGATAATCTTTTTCTGGGTATTCATAGAATATGTGAATAACTGTCACGAAGAGTGTTGAGCTACAAGGTAC
>Cbei_0788(lysP) Score=123.8 Pos=-327 [Clostridium beijerincki NCIMB 8052]
TAACTAAGATAGAGGCGCGAAATTTAAGAGTATTATTATGGAGGTAAGCTCATTGAAGTAATAAGAAAGGAACTTTCGCCGAAGTAAATAGCTGATTGCTTTAATACTATTTGCTGGGCTTGTGTAAAATATATACAAGACTGCCACAACTTATTTTGTGGAGAGCTATTTTTAAT
# RNA - PreQ1
>Cbei_2538(queD) Score=19 Pos=-207 [Clostridium beijerincki NCIMB 8052]
TACGGACAGTTCATTAAGACCATCCTGTCATTAAAAAAAACTAGGCATTTTA
>Cbei_0741(queT) Score=17.6 Pos=-272 [Clostridium beijerincki NCIMB 8052]
TATAGTCAGTTCGAAAGCCTCCTGACTTAAAATAAAACTACGGTTAAAT
# RNA - Purine
>Cbei_4067(pbuO) Score=84.8 Pos=-325 [Clostridium beijerincki NCIMB 8052]
ATATAAATAATGAAATTTTACCCGTATATGCTTGAAAATAAGGTTCAAGCGTTTCTACCGGACTACCGTAAATTGTCTGACTATGGGTGTTTATAGGTACTTG
>Cbei_1910(COG2509) Score=65.4 Pos=-130 [Clostridium beijerincki NCIMB 8052]
AAAAGTTAATAATATTCACTTATATAAATCTGATAATAAGGGTCGGATGTTTCTACCAAGCTACCGTAAATTGCTATAGGACTATAAGTGTCTACTTAAAAATTAT
>Cbei_2426(pbuX) Score=69.5 Pos=-245 [Clostridium beijerincki NCIMB 8052]
AACAGTTCATACAAAAGACTCGTATATTTCCGATATTATGGTTGGAAAGTCTCTACCTGCTATCCGTAAATTAGCAGACTACGAGGTAGTGTTTTAGTGCTAA
>Cbei_0331(guaB) Score=65.7 Pos=-244 [Clostridium beijerincki NCIMB 8052]
ATATAGCACATTTGAAAACTTATATATACCTTGAATATGGCAAGGAGTATCTACCGGGAGCCGTAAATTTCCGACTATAAGTGATATTAGTATAGGCTA
# RNA - PyrR
>Cbei_1000(pyrB) Score=37.4 Pos=-165 [Clostridium beijerincki NCIMB 8052]
TAACCTTTAATTTGATTCAGAGAGATCAATAAGGAAGTTATATAATACCAATGATCTAGGATTATTATGCCTTCCTTTATTTTAAGGAAGGTTTTTTATTA
>Cbei_1715(pyrP) Score=29.4 Pos=-38 [Clostridium beijerincki NCIMB 8052]
TTTTAATTTAGTTCAGAGAAGCTAAGAAGGG
>Cbei_0028(carA) Score=33.9 Pos=-232 [Clostridium beijerincki NCIMB 8052]
TACACTTTAACTTGGTCCTGTGAGGCCAAAAAGGGAAGCATAACTATGATATTTGAAAGCTGAATGAAAAATTTCATAGCTTATTTTTTGA
# RNA - SAM
>Cbei_0239(metI) Score=85.4 Pos=-254 [Clostridium beijerincki NCIMB 8052]
TCTTATTAAGAGCGGTGGAGGGACTGGCCCTTTGAAGCCCGGCAACCTGAAAGATTTTATATATAAATTTTTTCGTTGGTGCTAAATCCTGCAAGAGAATATCTTGAAAAATGAGAGGA
>Cbei_1401(msd) Score=92.7 Pos=-266 [Clostridium beijerincki NCIMB 8052]
ACTTATCAAGAGTGGTGGAGGGACTGGCCCGAAGAAACCCAGCAACCGGTAAATTTTATAGAATTACTTGGTGCTAAATCCTGCAGCGTAAGAGCTGGTAGATAAGGTAT
>Cbei_0766(metY) Score=92.4 Pos=-312 [Clostridium beijerincki NCIMB 8052]
TTTTATCAAGAAAGGCGGAGGGACTGGCCCTATGATGCCTAGCAACCTGAATTAAAAACCTATTTTAATTTAAGGTGCTAATTCCTGCAGATATTTTATCTGAAAGATAAGAATG
>Cbei_0636(metN) Score=84.2 Pos=-261 [Clostridium beijerincki NCIMB 8052]
TCTTATCGAGAGCGGTGGAGGGACTGGCCCTTTGAAACCCGGCAACCGAAGTATTATTTTTTACTAAATGATATTTATATGGTGCTAATTCCAGCAGCTTTTAGCTGATAGATGAGAGGA
>Cbei_0428(metK) Score=88.5 Pos=-333 [Clostridium beijerincki NCIMB 8052]
TCTTATCAAGAGAGGTGGAGGGAAAGGGCCCTGTGAAACCCGGCAACCTGTATTATATAAGGTGCCAATTCCTGTAGAGTTTTCTACAAGATAAGAAAA
# RNA - T-box(Ala)
>Cbei_1104(alaS) Score=101.7 Pos=-454 [Clostridium beijerincki NCIMB 8052]
ATTAAGCGATGAATAGGATAAGTAAATTTATCATAGTCATTTCAGAGAAAAAGTGGTTGGTGAAAACTTTTGGCTATATATTTTGAAGCTACCTAGGAGCTATAAATTACTAAGTGATGTATGATTATATCATACATAATTAGGGTGGTACCGCGGAATTCTAGCTTTCGTCCCTATATC
>Cbei_4150(alaR) Score=115.9 Pos=-323 [Clostridium beijerincki NCIMB 8052]
TTTAAAGATAGTGATAAGGAAGAGTATATAAATGGTAAACTTTTAAGAGAGCTAGAGGTCGGTGGAATCTGGTAAGTATCCTTTATAGAAGCAGCCTTTGAATTTTATAGCTGAGAAATAAAAATTTTTAGAAAATAAGAATTTTTAATTAGGCTATAACGTGTTCCTCACGTTATAGAGGTGGAGTATAATATGTACTCTAGCTGAGTGAACAATTTTTAAGTTGTTTATTAGGGTGGTACCGCGAAGTAGTTCTTTCGTCCCTTGT
# RNA - T-box(Arg)
>Cbei_1019(argS) Score=50.4 Pos=-459 [Clostridium beijerincki NCIMB 8052]
AAAATTCTAAGAAGAGGAAAGTAATTTAATTAATTCCTTTAGCGAATAGGGAGATGGTGTAAGCCCTATGGATAGATTAAGTGAAAAGAGCCTTGGAGAAATCACCTGAAATAAGT
>Cbei_1019(argS) Score=43.8 Pos=-338 [Clostridium beijerincki NCIMB 8052]
AAAAGATAATAATCTAATATAGCTGGTATGATATATTAATTATTATTTTTAAACCTTTAGTAGGGCTGGTCGCAAGTTAAATTGCGTTAAAAGTTGAGAGGTATTTTATTTATATAAAATACAATAAGAGTGGTACCGCGGATAATTCGTCTCTTTTTA
# RNA - T-box(Asn)
>Cbei_2126(aspS2) Score=114.1 Pos=-383 [Clostridium beijerincki NCIMB 8052]
TATATGCAATGATGAAGAAAAGTAAATTCAAATAGATGATTTTTAGAGAGCAGATGATGGTGGAATATCTGTATGAGTCTTGAATTGAAAGAACACTTCGGAGCTATTAACCGAAATTTTATATTAAAATAGTAGGCTTAATCGGGTCCATACCGTTAAAAGTGGAGAGTATAAAACAATAATGTTTTGTACTTCATTGAGGTGAGTTTTTTATAAACTAACTAGGGTGGTACCGCGAGTTAATCTCGTCCCTGTGCA
# RNA - T-box(Cys)
>Cbei_0577(cysK) Score=47.8 Pos=-267 [Clostridium beijerincki NCIMB 8052]
TTAAAAAATGGAGCGATAGTATAGCCATTGATTTTTTGATATATTTTTTAGTATGATTTTCCGGGATCACCCGTTATAGTGATATGATATCTTAAGTATCAAAATTGAGAGGGATTAGTTATTTAATCCAATTAGAGTGGAACCGCGAAATTTACTTCGTCTCTATAAT
# RNA - T-box(Gly)
>Cbei_0106(glyS) Score=86.8 Pos=-223 [Clostridium beijerincki NCIMB 8052]
TACACATGTTGAAAAAGAAAAGTAATTTATAAGTCAGTTGAAGAGAGATGATGTTTGGTGGAAATCATTATTGGTTATAAATGAATGGAGCTTTTGAGTGTGAGGAAATCGATGAAGAAAGATGGGCTTAAGCCAAGAAGGGTGGAACCGCGGAATTATATTTCGTCCCTTTGTG
# RNA - T-box(Ile)
>Cbei_0212(ilvH) Score=54.7 Pos=-274 [Clostridium beijerincki NCIMB 8052]
AAAATGCTGAGATGGAGAAAATTATTTAGTAGATAAGTTGCAGAGAGTCGATGGCTGGTGAGAATCGATACTTTAGCTCTATAATTATCACTCCTGAGCAGAATCCAGAAAGAGGAACAACGTTTCTTGAGTAAAAGATATCCGGTGTGCATCCGTTATATGCAAGGGTTTGT
>Cbei_0046(ileS) Score=85.5 Pos=-341 [Clostridium beijerincki NCIMB 8052]
AAAAGACGATGATTAGGAAAAGTATCTTAGATATTATTTTTAGAGAGTAGTTGGTTGGTGTAAAGCTATAATAAATCTTAGAGAAAATCACCTAGGAGTTGGAGGCTGAAAGGCGTAATGCCGAATAAGTTATCACGTAAGAGCCTGCGTTAAAGGATAGAGTATGTATGTACTTGAAATAAAACATTTAATTTTGCGTTTAGATGTTTTAGCCTTAGGTGGTTTGCGAATTCAACTTCGTCCTTTAGGA
# RNA - T-box(Leu)
>Cbei_4590(leuS) Score=106 Pos=-382 [Clostridium beijerincki NCIMB 8052]
ATTGTGCGATGAATAGGAGTATTAGTAATAATTATATCTTAAAGAGAGCTGTTGTTTGGTGTAAAATAGTGTTATATTATTATGAACTTGCCTAGGAGCTTACTTGTTAAAAGCAAGTACGGTAGACCCGTTAAAATAATAAGTGAGAAGGATAAATTTGTTTTTTTATCTCTTCTAATTAAGAGTGGTACCACGGAAATTATGCTTTCGTCTCTTTGTT
# RNA - T-box(Lys)
>Cbei_3591(lysU) Score=48.1 Pos=-338 [Clostridium beijerincki NCIMB 8052]
AATGAAAACCCAGCATGAATCAAGTTTCACTTAATAGAGGTAGGATGTGACGGAATACCCCGTTATAGGTATAGAGTATCTCGTTTTTTGATGTACTTGAAGAGGTGTATACGGCAACGCATACATAAACTGAGGTGGTACCACGAATTTATAACTTTCGTCCTCAAG
# RNA - T-box(Met)
>Cbei_3185(metS3) Score=32 Pos=-285 [Clostridium beijerincki NCIMB 8052]
ATTATAAGTGATGCTATGACGTAAGTTCACGTTACAGAACCAGAGTATGATTTAACCTATAATTTTAGGGAGATGGTGTACTTGAAGAGCCTAAAATGGTGACATTTTAGGGAAAAGGGTGGCATCGCGAAATAGAAGTTTCGCCCCTGTA
# RNA - T-box(Phe)
>Cbei_1573(pheS) Score=113.6 Pos=-339 [Clostridium beijerincki NCIMB 8052]
GAAAAACTGTGAATGAGAGAGTAGATATTAGAAAAGTTTTAAGGGAGAGAAGGTCATAGACTGTAAGCCTTCTTAAATAATATAATATTGAAGTTCGCTCAGGAGTTCTAGCTGTGAAATTTATAGTAGTAGCTAGCGGCAAGAAGAGTCGTTAATTAAATTGAGTTGGGTACTTTTTTAGTTCCAATTAGGGTGGTAACGCGGATAATTCGTCCCTTTTTA
# RNA - T-box(Pro)
>Cbei_0130(proS) Score=80.8 Pos=-326 [Clostridium beijerincki NCIMB 8052]
GTAAAACGTTGATGAAGAATAGTAGAAGTCGATTATATAAGAGAAAAAGTCCGTGGGCTGAAAGACTTTTAAACAGGCTTTGAACCAGCTTTTGAGTATAGGGAAAAACTATCGGTCTAAAACCGTTATCATTGCTAGAGAACAAATTTAGGTGGTACCGCGATATAAAGTTCGCCCTAATATA
# RNA - T-box(Ser)
>Cbei_1431(serS) Score=104.6 Pos=-272 [Clostridium beijerincki NCIMB 8052]
AAACAGCGATGATAAAAACTACGATTTATAAATTTCTTCAGAGAGCCGATGGGTGGTGCGAATCGGTGAAAGGTTAAATCTTTCCACTTTTGGAGCTGTGCGTGATAAATGCAAAGGTTAGTAACCTATATAATACTAGTGTCGAGGGGCTGGTTGTAATATTAACCAGCAATTTGGGTGGCAACGCGGATTATTCCGTCCCAATTAT
# RNA - T-box(Thr)
>Cbei_0293(thrS) Score=56.2 Pos=-394 [Clostridium beijerincki NCIMB 8052]
AATAAACACGTTGATGAGGACAGTAAGCTAAAATCTTATTTTTCAGAGAGAGAATATGTTGGTGCGATTATTCTTATATAAATTTAGACTGAAAACCACCTCTGAGTGGCCCTAATAAAGCCCGTAATTATCACGTTACGATAAATTCAAGTGACCTAT
>Cbei_3206(thrZ) Score=104.3 Pos=-394 [Clostridium beijerincki NCIMB 8052]
TTTTTAGGCAATGAAAGGGAAAAGTATTATAGAGTACAGTTTTCAGAGAGGAAATGTCACCGACTGTAAGCATTTCTAAATATGACTATGAGAAAAACTACCCTGGAGCTATGGTTTATTAGCAGATTTTGTGAAATGCCATCGGTGAAAATCGTTAAAAATTTTAGAGAAGAATTGAGTTTATTTAATTCAATTTGGGTGGAACCACGGATATTATGCATTCGTCCCAAGG
# RNA - T-box(Trp)
>Cbei_0652(trpP) Score=103.7 Pos=-408 [Clostridium beijerincki NCIMB 8052]
TAAATCCTATGAAGAGGGATAGTAATCATATAACAATGTTAAAGAGAGCTGAAGGTGGTGAGATTTCAGTACGGTAGTTAATGATGAATGGGCCTTTGAGGAGCGAGATGAAATCTTTTGAGAGTAGTTTAGCCGTAAGTCGCACGTTATAGCGAATAAGATATGTTTGTATCTGAAATGAGAGGCATTTTATGCAATCTAGGTGGCAACGCGGATAATATCCGTCCTATTAAT
>Cbei_1749(trpE) Score=19.1 Pos=-193 [Clostridium beijerincki NCIMB 8052]
AATATAGAGTTAGAAGTAAAAGTATTTACTATTCGCCATATTAAATTTGACTATTATTTAAAGATTAAAGTAGCTATGAGAAATACCGTTTAGATTGTATTTGATTTTGGGTGGCATAACGAGTCACTTCGTCCCAATATT
# RNA - T-box(Tyr)
>Cbei_2416(tyrZ) Score=100 Pos=-353 [Clostridium beijerincki NCIMB 8052]
TAAAAGCAATGAAAAGAATAAGTAGAAATTAGTGATGCCATACAGAAAGTTACCGGTTGATGAGAGGTGCATGGAAGCTGGTTTTGAATACATCTTAGAGCTTCAAGCTGAAAAAAGTTTCTTTTGAGTAGGTGATGACGGAACCCTGCACCCGTTATAGTGCTAAAGTATAACCAAAATTTTGGCGTACTTGAAGAGGTTAATCGTGTGAGCGATTAATGAATTAAGGTGGTAACACGGGAGTTATACTCTTGTCCTTTATAT
# RNA - T-box(Val)
>Cbei_1782(valS) Score=80.3 Pos=-495 [Clostridium beijerincki NCIMB 8052]
CTAAATCATAGATTTAGAAAGAACTAGCAAGAACTAGGAAGAGAGAGGGAGGCGCTGAAAACCCTTATGCAAGAAATTTTGAAGGTAGCTTTTGAGCTTCTTTAGTGAAATAATAGTAGCTAAAGACGGTTTGTCTGAATCGTTATTTAAATTAAGAGTCCATTAATGCAGTAATTCTGTATATGTGGAAATAAAGGTGGTACCGCGAGCTTTCGTCCTTTTGTG
>Cbei_2646(ilvB) Score=106.8 Pos=-402 [Clostridium beijerincki NCIMB 8052]
TAAAAACTGTGAAGAGGAAGAGTACATATATTACTGAAATAAAGAGAGAGAATAATTGCTGGAAATTCTCATGATGTATATATGGAATGTAGCCTTGGAGTTTTTAATCGAAATCTTAATTGTTAGAGAGTAGAATTAAACGGATTGTCTACCGTTAAAAGGACAATAATATCGGTTCTTTAACCCGTATTATTAATAAGTGTGTATTTGATTATACAAAATTAGGTGGTACCGCGGTGATTATCTCTTCGTCCTATAATA
# RNA - glmS
>Cbei_0246(glmS) Score=85.5 Pos=-277 [Clostridium beijerincki NCIMB 8052]
GTAAATTCAACTATCCAAATCGAAGATTTGGAGTTTCATTTACGTCGACGAGGTTGGGGAGTATCGAAACTTCGGCGGGTGCCCCACGGTATCGCACTACCGTAAACGACTGGTAAAACTGTGAAGTGATTCACAGGACAAATTCAGTCTGGTGTTAAAACC
# RNA - TPP
>Cbei_0647(thiF) Score=76.7 Pos=-294 [Clostridium beijerincki NCIMB 8052]
TAAAAGGCTAGGGGTGCCAATTTAATTGGCTGAGAGAAGCTTATTTGCTTTAACTCTTTTGACCTGATGTGGCTAATACCACCGTAGGGAAGCAATAAATATTTTAGAA
>Cbei_0066(thiT) Score=71.9 Pos=-157 [Clostridium beijerincki NCIMB 8052]
TATAATGTGCTAGGGGAGCCGAGAGGCTGAGATTTGATATTCATAAACCCTTAAAACCTGATCTAGTTAATTCTAGCGTAGGGAATGCAACCTCTTAAAAAC
>Cbei_2088(tenA) Score=72.4 Pos=-189 [Clostridium beijerincki NCIMB 8052]
ACGAGCACTAGGGGAGCCGTAATGGCTGAGATGAGTTTTTCAGACCCTTTGAACCTGCACTGGGTAATGCCAGCGAAGGGAAGTTATAAGATAATATAAA
>Cbei_4491(thiW) Score=68.2 Pos=-301 [Clostridium beijerincki NCIMB 8052]
ATTGAATAACTAGGGGAGCTAATATTTTGGCTGAGATTGGAAAGATTGATTTCCTAGACTCTTATAACCTGATTTGGATAATACCAGCGTAGGGAAGTATATTAATATTATT
# TF - Zur: Cbei_1336
>Cbei_4334(znuC) Score=6.4 Pos=-60 [Clostridium beijerincki NCIMB 8052]
CTATTGCAAATTATTTGCATTTG
>Cbei_3261(CAC1592) Score=5.5 Pos=-33 [Clostridium beijerincki NCIMB 8052]
TAAATGCAAATACATTGCAACAA
>Cbei_0477(znuA) Score=5.1 Pos=-34 [Clostridium beijerincki NCIMB 8052]
CAAATGCAAATCAGATGCAAACT
>Cbei_4668(znuA) Score=5.6 Pos=-34 [Clostridium beijerincki NCIMB 8052]
CAAATGCAAATCGTATGCATGTG
>Cbei_2410(fld) Score=5.6 Pos=-53 [Clostridium beijerincki NCIMB 8052]
TAATTGAGAATGATTTTCAAAAT
>Cbei_4198(feoA) Score=5.4 Pos=-168 [Clostridium beijerincki NCIMB 8052]
TCATTGAAAATCATTTTCAATGA
>Cbei_4198(feoA) Score=5.4 Pos=-112 [Clostridium beijerincki NCIMB 8052]
TTAATTAAAATCATTATCAATTG
# TF - NiaR: Cbei_0009
>Cbei_0792(nadA) Score=6.2 Pos=-50 [Clostridium beijerincki NCIMB 8052]
CAATGGTGTATATACACCTGTA
>Cbei_1404(niaX) Score=6.1 Pos=8 [Clostridium beijerincki NCIMB 8052]
TACTAGTGTATATACATGTGAT
# RNA - ydaO-yuaA
>Cbei_1453(COG1246) Score=97 Pos=-337 [Clostridium beijerincki NCIMB 8052]
GATATATGTAACGCTTAATCACTTTGAACGGGAGAACCATTTTTTGGGGTGAATCTTATTACACGATAATAAGTAGGGTTAATTTTCTTCAATCCGAATCCGTCAGCTAATCTCGTAAGCGTAGAAGAGAAGTTTT
>Cbei_2934(dapB) Score=98.8 Pos=-249 [Clostridium beijerincki NCIMB 8052]
TAATTATAACGCTGAATCTTTTTGAACGGGAGAACCATTTTTTGGGGTGAATCTTATTTTAGGATAAGTAGGGTTATTTTCTTCAATCCGAATCCGTCAGCTAATCTCGTAAGCGTTGAAGAGAAGTTTTTT
# RNA - ykkC-yxkD
>Cbei_3447(COG3382) Score=82 Pos=-155 [Clostridium beijerincki NCIMB 8052]
TATTTAAGTTTTCTAGGGTTCCGCAGTTTGTAACTGGCAGGTCCGAGAGAAAACGCATAGTTTATACTATGTTCACGGAAGGATAAAAGCCTGGGAGAT
# RNA - ykoK
>Cbei_3363(mgtE) Score=153.9 Pos=-406 [Clostridium beijerincki NCIMB 8052]
AAAAACTTTGTTAGGTGAGGCTCCTATATAGATACATGCTGCTGCCCGGAAACGTCGAGAGACGCCAATGGGTCAACAGGTATTGCCGGATTAAGGTTCTACTTAATGTAGCCGAAAACCATATGGTTTTCTATGCTCTATAGTGCTAAAACTCAACGAGTGAAGGTTAATAC
# RNA - yybP-ykoY
>Cbei_2212(ykoY) Score=17.3 Pos=-373 [Clostridium beijerincki NCIMB 8052]
CACTAAGCATTTTTTGCTTTCAAAGCCGGGATCTCTCCGTAATGACGACTTTGAATCCTGTTATAATTAACAGGCAGT
>Cbei_0306(atcL) Score=48.5 Pos=-347 [Clostridium beijerincki NCIMB 8052]
TCACTACATTAAAAGGGAGTAGTTATAAATATAACATCAACAATCGCGACTATATTGTTAGTCTGGTGTTATATACCCTAACAGGTAACGAGACTTTTAATATAACT
>Cbei_3038(Cbei_1147) Score=47.1 Pos=-182 [Clostridium beijerincki NCIMB 8052]
TTCATATAACTTAGGGGAGTAGCTTATAAGCTATAGAGCCAACAACCGGCAATTAAAAATGCCTGGTTCTATACTCCAAATGGAAAGCAAGACCTTTGATACGATT
>Cbei_2213(htpX) Score=64.8 Pos=-211 [Clostridium beijerincki NCIMB 8052]
CTCATTTATAGGGGGAGTAACTGCCTGTTAATTATAACAGGATTCAAAGTCGTCATTACGGAGAGATCCCGGCTTTGAAAGCAAAAAATGCTTAGTGAGACTCTATAGTTAGAACG
# TF - CcpA: Cbei_0047
>Cbei_2384(xylB) Score=4.4 Pos=-152 [Clostridium beijerincki NCIMB 8052]
ATGAAAATGTATTCAA
>Cbei_2384(xylB) Score=4.2 Pos=-83 [Clostridium beijerincki NCIMB 8052]
TTTAAAAAGTTATTTA
>Cbei_2389 Score=4.2 Pos=-126 [Clostridium beijerincki NCIMB 8052]
ATAAAAATTATTAAAT
>Cbei_2388 Score=4.3 Pos=-145 [Clostridium beijerincki NCIMB 8052]
TTATAAAAGTTAAAAT
>Cbei_2386(tal) Score=4 Pos=-43 [Clostridium beijerincki NCIMB 8052]
TATTAAATGATTTTTA
>Cbei_1222(CAC2689) Score=4.3 Pos=-29 [Clostridium beijerincki NCIMB 8052]
ATGATAACAATTTTAA
>Cbei_2389 Score=3.9 Pos=-171 [Clostridium beijerincki NCIMB 8052]
TTGATAATAATAAATT
>Cbei_2775(mutT1) Score=4.3 Pos=-132 [Clostridium beijerincki NCIMB 8052]
TTTAAAAATATTTAAT
>Cbei_2386(tal) Score=4 Pos=-112 [Clostridium beijerincki NCIMB 8052]
AAATAAATATTTACAT
>Cbei_4681 Score=4.3 Pos=-42 [Clostridium beijerincki NCIMB 8052]
ATTATAAAGATTTAAA
>Cbei_4681 Score=4.3 Pos=-244 [Clostridium beijerincki NCIMB 8052]
TTTAAAAAGTTATTTT
>Cbei_4454(tal) Score=4 Pos=-117 [Clostridium beijerincki NCIMB 8052]
AAGAAAATGTCTAAAT
>Cbei_4457(araA) Score=3.9 Pos=-192 [Clostridium beijerincki NCIMB 8052]
ATGAAAAGGTATACTA
>Cbei_0444(glnN) Score=4 Pos=-70 [Clostridium beijerincki NCIMB 8052]
TTATTAATGTTTTTAA
>Cbei_3239 Score=4.1 Pos=-172 [Clostridium beijerincki NCIMB 8052]
TAGATAATGTTTTTTA
>Cbei_4705 Score=4.4 Pos=-51 [Clostridium beijerincki NCIMB 8052]
ATGATAATGTTAACAT
>Cbei_1853(nifJ2) Score=4.4 Pos=-223 [Clostridium beijerincki NCIMB 8052]
TTTTAAAAGTTATAAT
>Cbei_2912 Score=4.1 Pos=-156 [Clostridium beijerincki NCIMB 8052]
TGGTAAAAGTTAATAT
>Cbei_2912 Score=3.9 Pos=-139 [Clostridium beijerincki NCIMB 8052]
ATTAAAATTATAATAA
>Cbei_2912 Score=4 Pos=-41 [Clostridium beijerincki NCIMB 8052]
TTATAAATATTTAATA
>Cbei_2495 Score=4 Pos=-126 [Clostridium beijerincki NCIMB 8052]
AAAAAAATATTTATAA
>Cbei_2495 Score=4.8 Pos=-92 [Clostridium beijerincki NCIMB 8052]
ATGAAAACATTTAAAT
>Cbei_4918 Score=4.4 Pos=-134 [Clostridium beijerincki NCIMB 8052]
ATGAAAATATTATATT
>Cbei_1278(YkgB) Score=4.2 Pos=-103 [Clostridium beijerincki NCIMB 8052]
AATTAAATGATTAAAA
>Cbei_2026(kdpX) Score=4.6 Pos=-227 [Clostridium beijerincki NCIMB 8052]
ATGAAAATTATTTAAT
>Cbei_0711(ptnA) Score=4.1 Pos=-374 [Clostridium beijerincki NCIMB 8052]
ATAAAAATTATTTTAT
>Cbei_0645(clpB) Score=4.3 Pos=-151 [Clostridium beijerincki NCIMB 8052]
ATAAAAAAATTTAAAA
>Cbei_3273(bglP) Score=4.1 Pos=-141 [Clostridium beijerincki NCIMB 8052]
TTTAAAAAGAATAAAA
>Cbei_3273(bglP) Score=4 Pos=49 [Clostridium beijerincki NCIMB 8052]
AAGAAAACGTTAATAG
>Cbei_3272(Cbei_3272) Score=4.2 Pos=0 [Clostridium beijerincki NCIMB 8052]
ATGAAAAAAATAATTA
>Cbei_0242(mtlA) Score=4 Pos=-86 [Clostridium beijerincki NCIMB 8052]
TTGAAAAGGTATTCTT
>Cbei_3335 Score=4.2 Pos=85 [Clostridium beijerincki NCIMB 8052]
ATGAAAAAGGTTATTA
>Cbei_5011(scrR) Score=4 Pos=-37 [Clostridium beijerincki NCIMB 8052]
ATAATAATATTTATAT
>Cbei_4082(uxaC) Score=4 Pos=-37 [Clostridium beijerincki NCIMB 8052]
ATATAAAATATTTATT
>Cbei_4657(uxaC) Score=4 Pos=-129 [Clostridium beijerincki NCIMB 8052]
AAGAAAACGTTATAGT
>Cbei_1838(uxaB) Score=4.1 Pos=-261 [Clostridium beijerincki NCIMB 8052]
ATATAAAATTTTAATT
>Cbei_1838(uxaB) Score=3.9 Pos=-157 [Clostridium beijerincki NCIMB 8052]
AAATAAACTTTTACTT
>Cbei_1838(uxaB) Score=4 Pos=-86 [Clostridium beijerincki NCIMB 8052]
ATTAAAATGATAGCAT
>Cbei_1832(uxaC) Score=4.6 Pos=-254 [Clostridium beijerincki NCIMB 8052]
AAGAAAAAGTTTATAT
>Cbei_1832(uxaC) Score=4.1 Pos=-99 [Clostridium beijerincki NCIMB 8052]
ATAATAAAGTTATCAA
>Cbei_3349(htd2) Score=4.1 Pos=-58 [Clostridium beijerincki NCIMB 8052]
TTGAAAATACTTACAA
>Cbei_2832(bglH) Score=4.2 Pos=-61 [Clostridium beijerincki NCIMB 8052]
ATATAAACATTTTATA
>Cbei_4510(glpP) Score=4.5 Pos=-26 [Clostridium beijerincki NCIMB 8052]
AAGAAAACAATTACAT
>Cbei_2148(dhaK) Score=4 Pos=-52 [Clostridium beijerincki NCIMB 8052]
ATATAAATAATTTTAA
>Cbei_4511(glpF) Score=4.4 Pos=-132 [Clostridium beijerincki NCIMB 8052]
TTTAAAACTTTTAAAT
>Cbei_4509(glpK) Score=3.9 Pos=-73 [Clostridium beijerincki NCIMB 8052]
ATATAAATAATAAATT
>Cbei_4508(glpA) Score=3.9 Pos=-143 [Clostridium beijerincki NCIMB 8052]
AAGTATACATTTACAT
>Cbei_4126(xynD) Score=4 Pos=-142 [Clostridium beijerincki NCIMB 8052]
TTGTAAACGATTATTG
>Cbei_4126(xynD) Score=3.9 Pos=-35 [Clostridium beijerincki NCIMB 8052]
TAATAAATATTTTATT
>Cbei_4125(xynT) Score=4.2 Pos=-41 [Clostridium beijerincki NCIMB 8052]
AAGAAAAATATTATAA
>Cbei_4636 Score=4.7 Pos=-162 [Clostridium beijerincki NCIMB 8052]
TTGTAAACGTTTTATA
>Cbei_1475 Score=4.1 Pos=-176 [Clostridium beijerincki NCIMB 8052]
CTGAAAATATTTTTAA
>Cbei_1475 Score=4.8 Pos=-46 [Clostridium beijerincki NCIMB 8052]
TTGAAAAAGTTTTTAT
>Cbei_0645(clpB) Score=4.4 Pos=-253 [Clostridium beijerincki NCIMB 8052]
TTAAAAAAGTTTAATA
>Cbei_4683 Score=4.1 Pos=-83 [Clostridium beijerincki NCIMB 8052]
ATATAAAAGATAATAA
>Cbei_0455(fucO) Score=4.7 Pos=-119 [Clostridium beijerincki NCIMB 8052]
TTGAAAACGATTTATA
>Cbei_1404(niaX) Score=4.2 Pos=-178 [Clostridium beijerincki NCIMB 8052]
ATATAAAATTTTTAAA
>Cbei_4640 Score=4.3 Pos=-214 [Clostridium beijerincki NCIMB 8052]
TAGAAAAAAATTAAAA
>Cbei_4847(licH) Score=4.7 Pos=-74 [Clostridium beijerincki NCIMB 8052]
ATTAAAACGTTTAAAA
>Cbei_4984(pagL) Score=4.7 Pos=-195 [Clostridium beijerincki NCIMB 8052]
ATGAAAATATTTTCAT
>Cbei_4985(Cbei_4985) Score=4.7 Pos=-131 [Clostridium beijerincki NCIMB 8052]
ATGAAAATATTTTCAT
>Cbei_4885(abrB) Score=4.1 Pos=-95 [Clostridium beijerincki NCIMB 8052]
TTATAAATATTTAAAA
>Cbei_2038(Cbei_2038) Score=4.7 Pos=-60 [Clostridium beijerincki NCIMB 8052]
ATTAAAATGATTTAAT
>Cbei_3351(ydiF) Score=4.7 Pos=-226 [Clostridium beijerincki NCIMB 8052]
ATGTAAATGTTTACTT
>Cbei_3821(atoE) Score=4.6 Pos=-194 [Clostridium beijerincki NCIMB 8052]
TTGAAAAAATTTTCTT
>Cbei_2040(ydiF) Score=4.1 Pos=-112 [Clostridium beijerincki NCIMB 8052]
TTTAAAAAAATAATAT
>Cbei_0230(malH) Score=4.1 Pos=-205 [Clostridium beijerincki NCIMB 8052]
AAGAAAAGGTTAACAA
>Cbei_2769(livK) Score=4.1 Pos=-225 [Clostridium beijerincki NCIMB 8052]
ATTTTAACGTTAAAAA
>Cbei_2769(livK) Score=4.1 Pos=-168 [Clostridium beijerincki NCIMB 8052]
AAGTAAATATTATTAT
>Cbei_5042(livK) Score=4.7 Pos=-188 [Clostridium beijerincki NCIMB 8052]
ATGATAACGTTTTTAT
>Cbei_5042(livK) Score=4.1 Pos=-153 [Clostridium beijerincki NCIMB 8052]
ATATAAAATATTAAAT
>Cbei_4450(araF) Score=4.6 Pos=-186 [Clostridium beijerincki NCIMB 8052]
ATGAAAACGTATTAAT
>Cbei_4959(cheY) Score=4.1 Pos=-132 [Clostridium beijerincki NCIMB 8052]
ATGATAAATTTATTAT
>Cbei_4661 Score=4.6 Pos=-74 [Clostridium beijerincki NCIMB 8052]
TTTAAAACGTTTAATT
>Cbei_3501(Cbei_3501) Score=4.6 Pos=-33 [Clostridium beijerincki NCIMB 8052]
TTGAAAACGTTATATA
>Cbei_4156 Score=4.1 Pos=-156 [Clostridium beijerincki NCIMB 8052]
ATAATAACATTTTAAA
>Cbei_2320(treB) Score=4.1 Pos=-215 [Clostridium beijerincki NCIMB 8052]
TATTAAACATTTTCAA
>Cbei_2320(treB) Score=4.6 Pos=-134 [Clostridium beijerincki NCIMB 8052]
TTGTAAACATTTAAAT
>Cbei_4325 Score=4.6 Pos=-203 [Clostridium beijerincki NCIMB 8052]
TTGAAAAAATTTTTAT
>Cbei_0663 Score=4.2 Pos=-234 [Clostridium beijerincki NCIMB 8052]
ATTAAATTGTTTTATA
>Cbei_0663 Score=4.2 Pos=-190 [Clostridium beijerincki NCIMB 8052]
ATGAAAATGAATTTTT
>Cbei_0663 Score=4.1 Pos=-100 [Clostridium beijerincki NCIMB 8052]
TAGAAAATTATATAAT
>Cbei_3986 Score=4.6 Pos=-59 [Clostridium beijerincki NCIMB 8052]
AAGAAAATGTTTACTT
>Cbei_4452(xylB) Score=4.6 Pos=-41 [Clostridium beijerincki NCIMB 8052]
AAGTAAACGATTTAAA
>Cbei_2175(leuA1) Score=4.5 Pos=-192 [Clostridium beijerincki NCIMB 8052]
ATAAAAATGATTAAAT
>Cbei_1967(ygeY) Score=4.5 Pos=-245 [Clostridium beijerincki NCIMB 8052]
TTGAAAATATTTACAA
>Cbei_1967(ygeY) Score=4.2 Pos=-184 [Clostridium beijerincki NCIMB 8052]
ATAAAAAATTTTTTTT
>Cbei_4465(galM) Score=4.2 Pos=-55 [Clostridium beijerincki NCIMB 8052]
ATGTAAATGTATACTA
>Cbei_2423(Cbei_2423) Score=4.5 Pos=-27 [Clostridium beijerincki NCIMB 8052]
ATGAAAATATTATAAT
>Cbei_4912 Score=4.5 Pos=-48 [Clostridium beijerincki NCIMB 8052]
TTAAAAAAGTTTTTAT
>Cbei_3872 Score=4.3 Pos=-48 [Clostridium beijerincki NCIMB 8052]
ATAAAAACTTTTTTAT
>Cbei_5019 Score=4.5 Pos=-60 [Clostridium beijerincki NCIMB 8052]
ATGAAAACGTATATAT
>Cbei_4806 Score=4.1 Pos=-35 [Clostridium beijerincki NCIMB 8052]
AAGAAAATTATAAAAT
>Cbei_4577(aroF) Score=4.1 Pos=-223 [Clostridium beijerincki NCIMB 8052]
ATGCAAAAATTTTATA
# TF - Rex: Cbei_0320
>Cbei_4319(fld) Score=5.5 Pos=-37 [Clostridium beijerincki NCIMB 8052]
AAGTTAATTATTTAACAA
>Cbei_1464(butA) Score=5.3 Pos=-41 [Clostridium beijerincki NCIMB 8052]
ATGTGAATTAATTAACAA
>Cbei_0321(crt) Score=5.5 Pos=-87 [Clostridium beijerincki NCIMB 8052]
TTGTTATATTATTAACAA
>Cbei_0325(hbd) Score=4.8 Pos=-146 [Clostridium beijerincki NCIMB 8052]
AAGTTAATAATGTAACAT
>Cbei_0325(hbd) Score=5.3 Pos=-126 [Clostridium beijerincki NCIMB 8052]
AAGATAATTAATTAACAA
>Cbei_0411(thlA) Score=5.4 Pos=-118 [Clostridium beijerincki NCIMB 8052]
TTGTTTAAATTTTAACAA
>Cbei_0411(thlA) Score=5.7 Pos=-58 [Clostridium beijerincki NCIMB 8052]
ATGTTAATAATTTAACAA
>Cbei_0327(hyd) Score=5.6 Pos=-84 [Clostridium beijerincki NCIMB 8052]
TTGTTATAATTTTAACAA
>Cbei_0327(hyd) Score=5.3 Pos=-287 [Clostridium beijerincki NCIMB 8052]
ATGTTAATAATTTATCAT
>Cbei_1722(bdh) Score=5.3 Pos=-99 [Clostridium beijerincki NCIMB 8052]
TTGATAAAATAATAACAT
>Cbei_2181(bdh) Score=5.1 Pos=-129 [Clostridium beijerincki NCIMB 8052]
TTGATAAAATAATCACAA
>Cbei_0203(ptb) Score=5.5 Pos=-74 [Clostridium beijerincki NCIMB 8052]
TTGATATAAATTTAACAA
>Cbei_3630(thl) Score=5.8 Pos=-48 [Clostridium beijerincki NCIMB 8052]
TTGTTAAAAAAATAACAA
>Cbei_1009(pflB) Score=5.4 Pos=-52 [Clostridium beijerincki NCIMB 8052]
TTGATTAAAAATTAACAA
# TF - AgaR: Cbei_4563
>Cbei_4564(agaA) Score=5.1 Pos=-58 [Clostridium beijerincki NCIMB 8052]
AAACTGATAATGTCCACTTA
>Cbei_4564(agaA) Score=5.9 Pos=-156 [Clostridium beijerincki NCIMB 8052]
CAAGTGGTAATTACCACTAA
>Cbei_4563(agaR) Score=5.9 Pos=-171 [Clostridium beijerincki NCIMB 8052]
TTAGTGGTAATTACCACTTG
>Cbei_4563(agaR) Score=5.1 Pos=-269 [Clostridium beijerincki NCIMB 8052]
TAAGTGGACATTATCAGTTT
>Cbei_4539(Cbei_4539) Score=4.8 Pos=-192 [Clostridium beijerincki NCIMB 8052]
AAACTGGTAGTATCCAGTTA
# TF - YcxD: Cbei_4035
>Cbei_4036 Score=10.5 Pos=-273 [Clostridium beijerincki NCIMB 8052]
AACTGTACT-(0)-AGTACAGTT-(12)-TATTGAATA
# TF - YhcF: Cbei_0791
>Cbei_0791(yhcF) Score=5 Pos=-57 [Clostridium beijerincki NCIMB 8052]
TTGTATTAACAACTTAGTACAA
# TF - MalR1: Cbei_0863
>Cbei_0863(malR1) Score=6.1 Pos=-53 [Clostridium beijerincki NCIMB 8052]
TTAAGGTAACGATACCGAAC
# TF - MalR2: Cbei_0234
>Cbei_0230(malE) Score=6 Pos=-139 [Clostridium beijerincki NCIMB 8052]
TTTCGCAATCGTTTGCGAAA
>Cbei_0664(amyE) Score=5.9 Pos=-177 [Clostridium beijerincki NCIMB 8052]
TTGTGCAACCGATTGCAATA
>Cbei_0664(amyE) Score=5.6 Pos=-39 [Clostridium beijerincki NCIMB 8052]
TTTTGCAACCGATTGCGCTA
>Cbei_0233(malM) Score=6.4 Pos=-89 [Clostridium beijerincki NCIMB 8052]
TTGCGCAAGCGATTGCTTTA
# TF - ScrR: Cbei_5011
>Cbei_5012(scrA) Score=6.7 Pos=-68 [Clostridium beijerincki NCIMB 8052]
ATATGGAACTGGTATCATAT
# TF - YtrA: Cbei_1885
>Cbei_1884(Cbei_1884) Score=6.9 Pos=74 [Clostridium beijerincki NCIMB 8052]
AAGTGTACTATATGAGCTAGTACACTT
# TF - ExuR: Cbei_1831
>Cbei_1832(uxaC) Score=5.8 Pos=-148 [Clostridium beijerincki NCIMB 8052]
AGTTGTTAACGTTCACAAAA
>Cbei_1832(uxaC) Score=5 Pos=-71 [Clostridium beijerincki NCIMB 8052]
AAATGTTCACGTGAACAGGG
>Cbei_1832(uxaC) Score=6.4 Pos=-39 [Clostridium beijerincki NCIMB 8052]
TTTTGTTCACGTGAACAAAA
# TF - TreR: Cbei_2319
>Cbei_2320(treP) Score=4.3 Pos=-273 [Clostridium beijerincki NCIMB 8052]
AATATGTTTAAACATATT
>Cbei_2320(treP) Score=4.5 Pos=-197 [Clostridium beijerincki NCIMB 8052]
AATTTGTTTAAACAAATA
# TF - Cbei_4343: Cbei_4343
>Cbei_4343(Cbei_4343) Score=8.8 Pos=-60 [Clostridium beijerincki NCIMB 8052]
TGTTCATACTGTATATATTGTATATATACAGTATGAACA
# TF - NrdR: Cbei_1123
>Cbei_0068(nrdD) Score=4.8 Pos=0 [Clostridium beijerincki NCIMB 8052]
ATGCTATATGTTGTGA
>Cbei_0068(nrdD) Score=5.5 Pos=-32 [Clostridium beijerincki NCIMB 8052]
ATACTATATATTGTGC
>Cbei_0194(nrdA) Score=5.2 Pos=-71 [Clostridium beijerincki NCIMB 8052]
ATACGATATGTTGTAT
>Cbei_0194(nrdA) Score=5.4 Pos=-30 [Clostridium beijerincki NCIMB 8052]
ACACAATATGTAGTAG
# TF - BirA: Cbei_1015
>Cbei_1914(bioB) Score=9 Pos=-96 [Clostridium beijerincki NCIMB 8052]
TTGTTAAC----------------GTTGACAA
>Cbei_1756(CAC3455) Score=8.4 Pos=-84 [Clostridium beijerincki NCIMB 8052]
TAGTCAAC----------------GTTGACAA
# TF - IscR: Cbei_1097
>Cbei_4356(cysK) Score=5.2 Pos=-55 [Clostridium beijerincki NCIMB 8052]
TTATAACATAGTAAACTGATAAGAATTAT
>Cbei_1097(iscR) Score=5.7 Pos=-105 [Clostridium beijerincki NCIMB 8052]
CAAAAGCCGAGTATTTTGGTAAGATATAA
# TF - YdfD/YisV: Cbei_2083
>Cbei_2084(yisU) Score=8.6 Pos=-88 [Clostridium beijerincki NCIMB 8052]
TGGTTGG-----------------TGGTTGG
# TF - PdxQ: Cbei_2205
>Cbei_2206(pdxO) Score=10 Pos=-149 [Clostridium beijerincki NCIMB 8052]
CTGTAT-(18)-TTGGCA-(10)-GTACAC
# TF - AraR: Cbei_4456
>Cbei_4461(Cbei_4461) Score=4.9 Pos=-52 [Clostridium beijerincki NCIMB 8052]
GATGTGGTACGTACATGTTT
>Cbei_4464(araJ) Score=4.9 Pos=-267 [Clostridium beijerincki NCIMB 8052]
TTTCATGTATGTACAAGTAT
>Cbei_4451(Cbei_4451) Score=4.4 Pos=-135 [Clostridium beijerincki NCIMB 8052]
ATTGATGTACTTACAAGATA
>Cbei_4464(araJ) Score=4.9 Pos=-234 [Clostridium beijerincki NCIMB 8052]
AAAATTGTACATACAATTAT
>Cbei_4465(epiA) Score=4.9 Pos=-123 [Clostridium beijerincki NCIMB 8052]
ATAATTGTATGTACAATTTT
>Cbei_4465(epiA) Score=4.9 Pos=-90 [Clostridium beijerincki NCIMB 8052]
ATACTTGTACATACATGAAA
>Cbei_4451(Cbei_4451) Score=4.4 Pos=-310 [Clostridium beijerincki NCIMB 8052]
CATGAAGTACGTACAACATA
>Cbei_4456 Score=4.5 Pos=-99 [Clostridium beijerincki NCIMB 8052]
CATCAAGTGCGTACAACTTT
>Cbei_4457(araA) Score=5.1 Pos=-260 [Clostridium beijerincki NCIMB 8052]
CATCTTGTATGTACAACATT
>Cbei_4457(araA) Score=4.6 Pos=-227 [Clostridium beijerincki NCIMB 8052]
AAGCTTGTACATACATCAAA
# TF - XylR: Cbei_2385
>Cbei_2386(tal) Score=6.6 Pos=-314 [Clostridium beijerincki NCIMB 8052]
ACTTATTAAATAAATTTTTAAAATA
>Cbei_2377(xylF1) Score=5.9 Pos=-78 [Clostridium beijerincki NCIMB 8052]
CATTATTAAAGGACATTTTAAAAGT
>Cbei_0109(xylT) Score=6.1 Pos=-393 [Clostridium beijerincki NCIMB 8052]
ACTTTTTAAATTACTTTTTAAAGTT
>Cbei_2386(tal) Score=6.2 Pos=-302 [Clostridium beijerincki NCIMB 8052]
AATTTTTAAAATATATTTTTAAAGT
>Cbei_2383(xylA) Score=6.2 Pos=-281 [Clostridium beijerincki NCIMB 8052]
ACTTATAAAATAACATTTAAAAAGT
>Cbei_0109(xylT) Score=6.3 Pos=-381 [Clostridium beijerincki NCIMB 8052]
ACTTTTTAAAGTTTATTGAAAAAGG
>Cbei_2389(xylA-II) Score=5.3 Pos=-121 [Clostridium beijerincki NCIMB 8052]
AATTATTAAATAAACTATAAGAATA
>Cbei_2384(xylB) Score=7.1 Pos=-98 [Clostridium beijerincki NCIMB 8052]
ACTTATTAAAATACATTTAAAAAGT
>Cbei_2388(CAC2611) Score=5.8 Pos=-132 [Clostridium beijerincki NCIMB 8052]
AATTATTAAAAGATATGTATAAAGA
>Cbei_4681(xylA-II) Score=6.5 Pos=-259 [Clostridium beijerincki NCIMB 8052]
ACTTATCAAACAACATTTAAAAAGT
>Cbei_4126(xynB) Score=5.5 Pos=-95 [Clostridium beijerincki NCIMB 8052]
AGTTTATAAAGGAAAGTTAAGAATA
# TF - SdaR: Cbei_4476
>Cbei_4480(grtP) Score=6.4 Pos=-152 [Clostridium beijerincki NCIMB 8052]
TATTGTTCAAATACACAAAA
# TF - MntR: Cbei_4069
>Cbei_4069(mntR) Score=6 Pos=-133 [Clostridium beijerincki NCIMB 8052]
TTTCTTAGCCTAGTCTAAATTA
>Cbei_4070(mntH) Score=6 Pos=-109 [Clostridium beijerincki NCIMB 8052]
TAATTTAGACTAGGCTAAGAAA
# TF - HcpR: Cbei_0780
>Cbei_1845 Score=5.2 Pos=-178 [Clostridium beijerincki NCIMB 8052]
TTGTATCATATGTTACGT
>Cbei_1434(hcp) Score=5.5 Pos=-223 [Clostridium beijerincki NCIMB 8052]
GCGTAACCATTGTTACAG
>Cbei_1434(hcp) Score=5.8 Pos=-128 [Clostridium beijerincki NCIMB 8052]
TAGTAACGTATGTTACAG
>Cbei_2276(hcp) Score=5.2 Pos=-126 [Clostridium beijerincki NCIMB 8052]
TAGTAACGTGTGTTACAG
>Cbei_4355(Cbei_4355) Score=5.8 Pos=-82 [Clostridium beijerincki NCIMB 8052]
TTGTAACTTTTGTTACAT