# TF - ZntR: Swoo_0297
>Swoo_0297(zntR) Score=7.1 Pos=-73 [Shewanella woodyi ATCC 51908]
ACCTTGGATTTAACTCTAAGGT
# TF - TyrR: Swoo_1717
>Swoo_1718(hmgC) Score=4.8 Pos=-172 [Shewanella woodyi ATCC 51908]
CTGTAATTATTTATTTACAA
>Swoo_2329(emrD) Score=4.1 Pos=-160 [Shewanella woodyi ATCC 51908]
TCGTAAGTATAGATTTACGC
>Swoo_1718(hmgC) Score=4.2 Pos=-256 [Shewanella woodyi ATCC 51908]
ATGTAACAAGAGATTGCCAC
>Swoo_1717(tyrR) Score=4.6 Pos=-161 [Shewanella woodyi ATCC 51908]
CTGTAAACAAGACTTGCCAC
>Swoo_3992(omp2) Score=4.1 Pos=-107 [Shewanella woodyi ATCC 51908]
GTGTCAGGAATGTTTTACGT
>Swoo_3603(pepD) Score=3.8 Pos=-180 [Shewanella woodyi ATCC 51908]
TTGGCAACTTTCAATGACAG
>Swoo_3222(liuR) Score=4.5 Pos=-129 [Shewanella woodyi ATCC 51908]
CTGGAAAACTTACTTGCCAT
>Swoo_1528(aceB) Score=3.9 Pos=-401 [Shewanella woodyi ATCC 51908]
GTGTATCATTAAGTTTACTT
>Swoo_3602(SO1117) Score=3.8 Pos=-151 [Shewanella woodyi ATCC 51908]
CTGTCATTGAAAGTTGCCAA
>Swoo_0894(brnQ) Score=5.1 Pos=-67 [Shewanella woodyi ATCC 51908]
GTGTAATCTAAAGTTTACAC
>Swoo_2373(pep1) Score=5 Pos=-127 [Shewanella woodyi ATCC 51908]
TTGTAAATATGATTTTACAC
>Swoo_0911(pep3) Score=3.7 Pos=-178 [Shewanella woodyi ATCC 51908]
AAGGAAACCTTTTCTTACAT
>Swoo_3202(ivdA) Score=4.7 Pos=-173 [Shewanella woodyi ATCC 51908]
CTGTAAATCTTGAGTGACAT
>Swoo_2309(aroA) Score=3.9 Pos=-89 [Shewanella woodyi ATCC 51908]
TTGTGTATCAATATTTGCAA
>Swoo_2309(aroA) Score=3.8 Pos=-323 [Shewanella woodyi ATCC 51908]
CTGGCATGTTTTTCTTCCAC
>Swoo_1715(phhA) Score=4.6 Pos=-121 [Shewanella woodyi ATCC 51908]
GTGTAACTTTTTGGTTACAA
>Swoo_2278(bkdA1) Score=4 Pos=-171 [Shewanella woodyi ATCC 51908]
ATGTAAAGCTAAACATACGG
>Swoo_2710(ldh) Score=5.1 Pos=-157 [Shewanella woodyi ATCC 51908]
GTGGAAAGCAAAATTGCCAC
>Swoo_1715(phhA) Score=3.8 Pos=-186 [Shewanella woodyi ATCC 51908]
TTGGCAATAATTCAATACGA
>Swoo_1528(aceB) Score=3.6 Pos=-341 [Shewanella woodyi ATCC 51908]
TTGGTAAATTTGTCTGACAA
>Swoo_2308(tyrB) Score=3.7 Pos=-178 [Shewanella woodyi ATCC 51908]
TTTAAAAGCAAACTTGCCAA
>Swoo_2308(tyrB) Score=3.8 Pos=-153 [Shewanella woodyi ATCC 51908]
GTGGAAGAAAAACATGCCAG
# TF - TrpR: Swoo_1267
>Swoo_1267(trpR) Score=5.6 Pos=-81 [Shewanella woodyi ATCC 51908]
TGTAATGGAGAGGCAGTACA
>Swoo_1258(aroF) Score=6.7 Pos=-106 [Shewanella woodyi ATCC 51908]
TGTAATGGTGTAGCATTACA
# TF - TreR: Swoo_1435
>Swoo_1435(treR) Score=6 Pos=-106 [Shewanella woodyi ATCC 51908]
GCTTGCAAACGATTGCAATT
>Swoo_1437(treP) Score=6.4 Pos=-73 [Shewanella woodyi ATCC 51908]
TTTTGCAATCGTTTGCAAAA
>Swoo_1438(treT) Score=6.4 Pos=-175 [Shewanella woodyi ATCC 51908]
TTTTGCAAACGATTGCAAAA
>Swoo_1434(omp(Tre)) Score=6.4 Pos=-160 [Shewanella woodyi ATCC 51908]
AAATGCAAACGATTGCAAAA
>Swoo_1434(omp(Tre)) Score=6 Pos=-137 [Shewanella woodyi ATCC 51908]
AATTGCAATCGTTTGCAAGC
>Swoo_1435(treR) Score=6.4 Pos=-83 [Shewanella woodyi ATCC 51908]
TTTTGCAATCGTTTGCATTT
# TF - SoxR: Swoo_3439
>Swoo_3439(soxR) Score=4.4 Pos=-113 [Shewanella woodyi ATCC 51908]
AgtTaAAGTcgACTTtAaGT
# TF - SO4705: Swoo_3044
>Swoo_3043(SO4706) Score=6.8 Pos=-137 [Shewanella woodyi ATCC 51908]
TTGTAATGAAAAATTAGCTAGACTACAA
>Swoo_3044(SO4705) Score=6.8 Pos=-84 [Shewanella woodyi ATCC 51908]
TTGTAGTCTAGCTAATTTTTCATTACAA
# TF - SO4326: Swoo_0467
>Swoo_0467(vexR) Score=6.9 Pos=-44 [Shewanella woodyi ATCC 51908]
ATGAATGAACATTCATTCAC
# TF - SO3393: Swoo_4056
>Swoo_4056(SO3393) Score=5.5 Pos=-62 [Shewanella woodyi ATCC 51908]
TTTTGAACAAACATTCAAAA
>Swoo_4056(SO3393) Score=7 Pos=-113 [Shewanella woodyi ATCC 51908]
TCTTGAATGTTCATTCAAGA
>Swoo_4056(SO3393) Score=5 Pos=-86 [Shewanella woodyi ATCC 51908]
ATTTGAACGATCATTCAAGT
>Swoo_4055(SO3392) Score=7 Pos=-33 [Shewanella woodyi ATCC 51908]
TCTTGAATGAACATTCAAGA
>Swoo_4055(SO3392) Score=5.5 Pos=-84 [Shewanella woodyi ATCC 51908]
TTTTGAATGTTTGTTCAAAA
>Swoo_4055(SO3392) Score=5 Pos=-60 [Shewanella woodyi ATCC 51908]
ACTTGAATGATCGTTCAAAT
# TF - SO3277: Swoo_1571
>Swoo_1571(SO3277) Score=7 Pos=-75 [Shewanella woodyi ATCC 51908]
ACTAGACTGTCCAGTCTAGT
>Swoo_1571(SO3277) Score=6.7 Pos=-103 [Shewanella woodyi ATCC 51908]
ACTAGACTGTCTAGTCTATT
>Swoo_1570(SO3278) Score=6.7 Pos=-64 [Shewanella woodyi ATCC 51908]
AATAGACTAGACAGTCTAGT
>Swoo_1570(SO3278) Score=7 Pos=-92 [Shewanella woodyi ATCC 51908]
ACTAGACTGGACAGTCTAGT
# TF - SO1758: Swoo_3142
>Swoo_3144(SO1756) Score=6.8 Pos=-100 [Shewanella woodyi ATCC 51908]
ACTGACACTATGGTGTCAGT
# TF - SO1578: Swoo_3433
>Swoo_3433(SO1578) Score=6.6 Pos=-90 [Shewanella woodyi ATCC 51908]
TTAACTGAACGATCGGTTAG
>Swoo_3433(SO1578) Score=5 Pos=-55 [Shewanella woodyi ATCC 51908]
ATAGCTAAACGTTCGGTCAA
>Swoo_3434(SO1577) Score=6.6 Pos=-62 [Shewanella woodyi ATCC 51908]
CTAACCGATCGTTCAGTTAA
>Swoo_3434(SO1577) Score=5 Pos=-97 [Shewanella woodyi ATCC 51908]
TTGACCGAACGTTTAGCTAT
# TF - NmlR: Swoo_4050
>Swoo_4049(pcaC) Score=7.1 Pos=-57 [Shewanella woodyi ATCC 51908]
CTTAGAGTTAACTCTAAG
# TF - SO0072: Swoo_4863
>Swoo_4863(SO0072) Score=7.1 Pos=-34 [Shewanella woodyi ATCC 51908]
TGTATCAATGTATTAATACA
>Swoo_4864(PF00561) Score=7.1 Pos=-75 [Shewanella woodyi ATCC 51908]
TGTATTAATACATTGATACA
# TF - SdaR: Swoo_3130
>Swoo_3133(grtP) Score=6.3 Pos=-155 [Shewanella woodyi ATCC 51908]
TATTGTGCATGCGCACAATA
# TF - PUR
>Swoo_3969(gcvT) Score=5.6 Pos=-160 [Shewanella woodyi ATCC 51908]
TATAATTTCGCCGCATTTTA
>Swoo_1559(guaB) Score=4.5 Pos=-57 [Shewanella woodyi ATCC 51908]
TATAATCCCGCCGCAATATT
>Swoo_3550(tsx) Score=5.5 Pos=-79 [Shewanella woodyi ATCC 51908]
TAAAATGCGGCGCCATAAAA
>Swoo_2744(purM) Score=5.6 Pos=-53 [Shewanella woodyi ATCC 51908]
TAGAATGGCGCCGCATAAAA
# TF - PsrA: Swoo_2543
>Swoo_2905(SO2935) Score=5.1 Pos=-86 [Shewanella woodyi ATCC 51908]
AATTAATCATTTGTTTTAAA
>Swoo_4857(SO0080) Score=5.7 Pos=-50 [Shewanella woodyi ATCC 51908]
AGTCAAACGCATGTTTGAAT
>Swoo_4794(etfD) Score=5.2 Pos=-45 [Shewanella woodyi ATCC 51908]
ATTAAAACACCCGTTTAACG
>Swoo_1504(fadE3) Score=6.2 Pos=-98 [Shewanella woodyi ATCC 51908]
ATTCAAACAATTGTTTAAAT
>Swoo_3236(etfB) Score=5.4 Pos=-123 [Shewanella woodyi ATCC 51908]
ATACAAACGGGCGTTTGAAA
>Swoo_1833(sdhC) Score=5.7 Pos=-351 [Shewanella woodyi ATCC 51908]
ATTTAAATAACCGTTTAAAT
>Swoo_2323(acdH) Score=6.1 Pos=-40 [Shewanella woodyi ATCC 51908]
ATTAAAACAACTGTTTTAAT
>Swoo_4199(echH) Score=6.1 Pos=-78 [Shewanella woodyi ATCC 51908]
AATTAAACACTTGTTTGAAT
>Swoo_1832(gltA) Score=5.7 Pos=-100 [Shewanella woodyi ATCC 51908]
ATTTAAACGGTTATTTAAAT
>Swoo_1528(aceB) Score=5.3 Pos=-536 [Shewanella woodyi ATCC 51908]
ATTGAAACGCTTGTTTAAAC
>Swoo_2604(fadE2) Score=5.8 Pos=-158 [Shewanella woodyi ATCC 51908]
ATTTAAACGTTTGTTTTAAA
>Swoo_3027(fadI) Score=5.4 Pos=-170 [Shewanella woodyi ATCC 51908]
AACCAAACAAGTGTTTAAAA
>Swoo_2300(fadH) Score=5.4 Pos=-18 [Shewanella woodyi ATCC 51908]
TTTTAAAAGGATGTTTGAAT
>Swoo_2300(fadH) Score=5 Pos=-31 [Shewanella woodyi ATCC 51908]
TTTAAATCAGTTGTTTTAAA
>Swoo_0021(fadB) Score=6.1 Pos=-166 [Shewanella woodyi ATCC 51908]
AATCAAACAAGTGTTTAAAT
>Swoo_3995(fadD2) Score=5.7 Pos=-95 [Shewanella woodyi ATCC 51908]
ATCTAAACACCTGTTTGATT
>Swoo_2110(fadD1) Score=5.7 Pos=-134 [Shewanella woodyi ATCC 51908]
ATTAAAACGCCTGTATGAAT
>Swoo_2543(psrA) Score=5.9 Pos=-41 [Shewanella woodyi ATCC 51908]
ATTTAAACGAGTGTTTTAAA
# TF - PrpR: Swoo_2500
>Swoo_2500(prpR) Score=5.9 Pos=-92 [Shewanella woodyi ATCC 51908]
ATTGTCGACAAT
>Swoo_2500(prpR) Score=5.9 Pos=-40 [Shewanella woodyi ATCC 51908]
ATTGTCGACAAT
# TF - PflR: Swoo_2879
>Swoo_2880(focA) Score=5.8 Pos=-155 [Shewanella woodyi ATCC 51908]
TATCAATTATATTGATG
>Swoo_2879(pflR) Score=5.7 Pos=-61 [Shewanella woodyi ATCC 51908]
CATCAATTTAATTGATA
>Swoo_2882(pflX) Score=5.2 Pos=-274 [Shewanella woodyi ATCC 51908]
ATTCAAGAATATTGATA
>Swoo_2883(pflB) Score=5 Pos=-517 [Shewanella woodyi ATCC 51908]
TATCAGTTTTAGTGATG
# TF - PdhR: Swoo_0318
>Swoo_0636(deaD) Score=6.3 Pos=-143 [Shewanella woodyi ATCC 51908]
AATTGGTAATACCAATT
>Swoo_3337(oadG) Score=5.7 Pos=-243 [Shewanella woodyi ATCC 51908]
TTTTGGTATGACCAATT
>Swoo_2882(pflX) Score=6.4 Pos=-214 [Shewanella woodyi ATCC 51908]
AATTGGTCTTACCAATT
>Swoo_2883(pflB) Score=6.4 Pos=-235 [Shewanella woodyi ATCC 51908]
AATTGGTCTTACCAATT
>Swoo_2881 Score=6.4 Pos=-351 [Shewanella woodyi ATCC 51908]
AATTGGTAAGACCAATT
>Swoo_1528(aceB) Score=5.2 Pos=-335 [Shewanella woodyi ATCC 51908]
AATTTGTCTGACAAATT
>Swoo_0318(pdhR) Score=4.3 Pos=-159 [Shewanella woodyi ATCC 51908]
TAATGGTCTGACCGCTA
>Swoo_0318(pdhR) Score=6.4 Pos=-39 [Shewanella woodyi ATCC 51908]
AATTGGTAAGACCAATT
# TF - NtrC: Swoo_4651
>Swoo_1181(glnK2) Score=5.2 Pos=-140 [Shewanella woodyi ATCC 51908]
TGCACCATGGTGATGCA
>Swoo_4643(glnA) Score=4.7 Pos=-216 [Shewanella woodyi ATCC 51908]
CGCACCAGGATGGTGAG
>Swoo_4643(glnA) Score=5 Pos=-199 [Shewanella woodyi ATCC 51908]
CGCACCATTATCGGGCA
>Swoo_4643(glnA) Score=5.4 Pos=-177 [Shewanella woodyi ATCC 51908]
CGCACCAAACTAGTGCA
>Swoo_0979(glnB) Score=5.4 Pos=-143 [Shewanella woodyi ATCC 51908]
CGCACCTTAATGGTGCG
>Swoo_0979(glnB) Score=4.6 Pos=-173 [Shewanella woodyi ATCC 51908]
TGCGCTAATTCCGTGCA
>Swoo_4650(ntrB) Score=5.6 Pos=-51 [Shewanella woodyi ATCC 51908]
TGCACTAGTTTGGTGCA
>Swoo_4650(ntrB) Score=6.2 Pos=-38 [Shewanella woodyi ATCC 51908]
TGCACCATAATGGTGCA
# TF - NsrR: Swoo_4881
>Swoo_1260(hcp) Score=5.4 Pos=-42 [Shewanella woodyi ATCC 51908]
ACATGCAAATAAAAAGCATGA
>Swoo_0492(dnrN) Score=4.9 Pos=-33 [Shewanella woodyi ATCC 51908]
ACATGCAAATACAAAGCAGCT
>Swoo_4755(Ssed_4366) Score=5 Pos=-139 [Shewanella woodyi ATCC 51908]
ACATGCGAAAAATATACAGGT
# TF - NrdR: Swoo_1381
>Swoo_2303(nrdA) Score=4.2 Pos=-163 [Shewanella woodyi ATCC 51908]
ACCATATATAGTGTGT
>Swoo_2303(nrdA) Score=5.2 Pos=-165 [Shewanella woodyi ATCC 51908]
ACACCATATATAGTGT
>Swoo_3049(nrdD) Score=5.1 Pos=-49 [Shewanella woodyi ATCC 51908]
ACACTATATGTGGTGT
>Swoo_3049(nrdD) Score=4.2 Pos=-80 [Shewanella woodyi ATCC 51908]
ACGCAACATATTGTGC
# TF - NorR: Swoo_0688, Swoo_0760
>Swoo_0760(norR) Score=5.2 Pos=-62 [Shewanella woodyi ATCC 51908]
GATTGTCAAAATGACATAC
>Swoo_0760(norR) Score=4.1 Pos=-37 [Shewanella woodyi ATCC 51908]
TATGGTCATATTCAAACCA
>Swoo_0686(nnrS2) Score=5.5 Pos=-525 [Shewanella woodyi ATCC 51908]
TAGAGTCAATATGACTACA
>Swoo_0686(nnrS2) Score=4.9 Pos=-499 [Shewanella woodyi ATCC 51908]
TGTAGTCATATTGACTCAC
>Swoo_0688(norR2) Score=4.9 Pos=-118 [Shewanella woodyi ATCC 51908]
GTGAGTCAATATGACTACA
>Swoo_0688(norR2) Score=5.5 Pos=-92 [Shewanella woodyi ATCC 51908]
TGTAGTCATATTGACTCTA
>Swoo_0761(norB) Score=5 Pos=-130 [Shewanella woodyi ATCC 51908]
CATAGTCATAATGACACAT
>Swoo_0761(norB) Score=5.1 Pos=-154 [Shewanella woodyi ATCC 51908]
AACTGTCATTTTTACAATA
>Swoo_0761(norB) Score=4.9 Pos=-172 [Shewanella woodyi ATCC 51908]
AGCTGTCATTTAGACACTA
>Swoo_0761(norB) Score=4 Pos=-199 [Shewanella woodyi ATCC 51908]
ATCAGTCATATTGATATTC
# TF - NhaR: Swoo_1233
>Swoo_2421(ccoH) Score=5.2 Pos=-88 [Shewanella woodyi ATCC 51908]
CCTCGATCGTATCGAGG
# TF - NagR: Swoo_1304
>Swoo_1100(chiA) Score=6.4 Pos=-306 [Shewanella woodyi ATCC 51908]
GATGACAGCGTTGTCATC
>Swoo_1305(omp_nag) Score=6.2 Pos=-34 [Shewanella woodyi ATCC 51908]
CATGACAGCGTTGTCATT
>Swoo_1309(pilM) Score=6.4 Pos=-311 [Shewanella woodyi ATCC 51908]
AATGACAGCGTTGTCATC
>Swoo_2719(cdxA) Score=6.1 Pos=567 [Shewanella woodyi ATCC 51908]
AATGACAGCGTTGTCACC
>Swoo_4312(pdaA) Score=5.6 Pos=-99 [Shewanella woodyi ATCC 51908]
AATGACAGCGTTGTCTTA
>Swoo_3939(omp_nag2) Score=5.9 Pos=-36 [Shewanella woodyi ATCC 51908]
TATGACAGCGTTGTCATT
>Swoo_3879(cbp) Score=5.9 Pos=-311 [Shewanella woodyi ATCC 51908]
ATTGACAGCGTTATCATT
>Swoo_0943(nagB) Score=6.4 Pos=-190 [Shewanella woodyi ATCC 51908]
AATGACAGCGTTGTCATT
>Swoo_1315(nagP) Score=6.1 Pos=-172 [Shewanella woodyi ATCC 51908]
AATGACAGCGTTGTCTTT
>Swoo_1312(nagK) Score=6.4 Pos=-108 [Shewanella woodyi ATCC 51908]
AATGACAACGCTGTCATT
>Swoo_1308(duf81) Score=5.7 Pos=-92 [Shewanella woodyi ATCC 51908]
TATGACAACGCTGTCAAT
# TF - MalR: Swoo_2196
>Swoo_2210(malZ) Score=6.1 Pos=-198 [Shewanella woodyi ATCC 51908]
TATGCATACGTATTCAAA
>Swoo_2210(malZ) Score=6.2 Pos=-47 [Shewanella woodyi ATCC 51908]
TATGCATACGTATGCAGA
>Swoo_2202(malT) Score=5.9 Pos=-282 [Shewanella woodyi ATCC 51908]
CATGAATACGTATGCAAG
>Swoo_2209(omp(Mal)) Score=6.1 Pos=-194 [Shewanella woodyi ATCC 51908]
TTTGAATACGTATGCATA
>Swoo_2209(omp(Mal)) Score=6.2 Pos=-345 [Shewanella woodyi ATCC 51908]
TCTGCATACGTATGCATA
>Swoo_3416(amyA2) Score=6.1 Pos=-178 [Shewanella woodyi ATCC 51908]
AATGAATACGTATGCAAA
# TF - LiuR: Swoo_3222
>Swoo_2710(ldh) Score=5.8 Pos=-174 [Shewanella woodyi ATCC 51908]
ATTGACGTTAACGTAAAG
>Swoo_1221(gltB) Score=6.2 Pos=-179 [Shewanella woodyi ATCC 51908]
GTTTACGTTAACGTAATG
>Swoo_2278(bkdA1) Score=6.2 Pos=-101 [Shewanella woodyi ATCC 51908]
GTTTACGTTAACGTAATG
>Swoo_3236(etfB) Score=5.7 Pos=-99 [Shewanella woodyi ATCC 51908]
GTTGACGTTAACGTTAAC
>Swoo_3202(ivdA) Score=5.9 Pos=-110 [Shewanella woodyi ATCC 51908]
CTTTACGTTCGCGTAAAC
>Swoo_3222(liuR) Score=6 Pos=-61 [Shewanella woodyi ATCC 51908]
CTTTACCTTTACGTAAAC
>Swoo_1270(thrA) Score=4.8 Pos=-377 [Shewanella woodyi ATCC 51908]
TTTGCCGTAAACGTAAGG
>Swoo_1528(aceB) Score=5.4 Pos=-553 [Shewanella woodyi ATCC 51908]
GTTTACGTAAAGGTAATA
# TF - IscR: Swoo_1775
>Swoo_1775(iscR) Score=4.1 Pos=-215 [Shewanella woodyi ATCC 51908]
TTTCGTGAGTATTATGGTAAAGATT
>Swoo_1775(iscR) Score=5.1 Pos=-90 [Shewanella woodyi ATCC 51908]
ATACTTGACTAAACTACTAGGTTTA
>Swoo_1775(iscR) Score=6.4 Pos=-65 [Shewanella woodyi ATCC 51908]
ATACTTGACTAAAACACTCAGGTAT
>Swoo_0159(nfuA) Score=4.4 Pos=-46 [Shewanella woodyi ATCC 51908]
AATCCATACTAAAACACTCAAGTTT
>Swoo_0492(dnrN) Score=5.4 Pos=-97 [Shewanella woodyi ATCC 51908]
TTACCCTAGTGTTTTAGTCGGGAAT
>Swoo_1203(erpA) Score=5.8 Pos=-64 [Shewanella woodyi ATCC 51908]
ATACTTGAACAAAATGGTCAGGTAT
# TF - IlvY: Swoo_0440
>Swoo_0441(ilvC) Score=5.2 Pos=-139 [Shewanella woodyi ATCC 51908]
GTTGCAATAATTGCAAT
>Swoo_0441(ilvC) Score=4.9 Pos=-108 [Shewanella woodyi ATCC 51908]
ATATCATTTTAAGCAAT
>Swoo_0440(ilvY) Score=4.9 Pos=-87 [Shewanella woodyi ATCC 51908]
ATTGCTTAAAATGATAT
>Swoo_0440(ilvY) Score=5.2 Pos=-56 [Shewanella woodyi ATCC 51908]
ATTGCAATTATTGCAAC
# TF - HypR: Swoo_2825
>Swoo_3726(COG2423) Score=4.5 Pos=-33 [Shewanella woodyi ATCC 51908]
TTGGTATACAAT
>Swoo_3449(colA1) Score=4.6 Pos=-35 [Shewanella woodyi ATCC 51908]
ACTTTATACAAT
>Swoo_2598(pdtP) Score=4.5 Pos=-29 [Shewanella woodyi ATCC 51908]
AATGTATAAAAT
>Swoo_0042(colA2) Score=4.7 Pos=-28 [Shewanella woodyi ATCC 51908]
ATTGTATCCAAA
>Swoo_2822(hypD) Score=5.3 Pos=-95 [Shewanella woodyi ATCC 51908]
ATTGTATACAAT
>Swoo_1099(prdP) Score=3.6 Pos=-126 [Shewanella woodyi ATCC 51908]
TTTGTATATTTT
>Swoo_2822(hypD) Score=4.9 Pos=-169 [Shewanella woodyi ATCC 51908]
TTTGTATGCAAT
>Swoo_2821(hypE2) Score=5.3 Pos=-106 [Shewanella woodyi ATCC 51908]
ATTGTATACAAT
>Swoo_2821(hypE2) Score=4.9 Pos=-32 [Shewanella woodyi ATCC 51908]
ATTGCATACAAA
>Swoo_0714(putA) Score=5.4 Pos=-124 [Shewanella woodyi ATCC 51908]
ATTGTATACAAA
>Swoo_2816(ampP) Score=3.6 Pos=-94 [Shewanella woodyi ATCC 51908]
AAAATATACAAA
# TF - HutC: Swoo_4839
>Swoo_4840(hutI) Score=4.6 Pos=-85 [Shewanella woodyi ATCC 51908]
ATACAAGTAAATACAAGTTG
>Swoo_4840(hutI) Score=6.5 Pos=-95 [Shewanella woodyi ATCC 51908]
TAGCTTGTATATACAAGTAA
>Swoo_4839(hutC) Score=5.4 Pos=-191 [Shewanella woodyi ATCC 51908]
CAACTTGTATTTACTTGTAT
>Swoo_4839(hutC) Score=6.1 Pos=-181 [Shewanella woodyi ATCC 51908]
TTACTTGTATATACAAGCTA
>Swoo_4838(hutU) Score=5.4 Pos=-110 [Shewanella woodyi ATCC 51908]
AGTGTTGTATATACAAGTAG
# TF - HmgQ: Swoo_1933
>Swoo_1932(hpd) Score=5 Pos=-265 [Shewanella woodyi ATCC 51908]
ATCTAATATTTTGTT
>Swoo_1933(hmgQ) Score=5 Pos=-47 [Shewanella woodyi ATCC 51908]
AACAAAATATTAGAT
# TF - HexR: Swoo_2540
>Swoo_3220(gnd) Score=4.6 Pos=-239 [Shewanella woodyi ATCC 51908]
TAGTAATTAACTTACCA
>Swoo_3551(nupC) Score=4.4 Pos=-124 [Shewanella woodyi ATCC 51908]
CTGAAATTAAACTTCAA
>Swoo_2541(pykA) Score=5.1 Pos=-76 [Shewanella woodyi ATCC 51908]
TTGTAATTTTCCTACAA
>Swoo_2241(adhE) Score=4.6 Pos=-146 [Shewanella woodyi ATCC 51908]
ACGTTATTTAATTACAT
>Swoo_1280(tal) Score=4.6 Pos=-104 [Shewanella woodyi ATCC 51908]
CTGTAATTTTTTTTCAT
>Swoo_3548(deoA) Score=4.9 Pos=-108 [Shewanella woodyi ATCC 51908]
ATGTAGTAAATTTACAT
>Swoo_1528(aceB) Score=4.6 Pos=-380 [Shewanella woodyi ATCC 51908]
ATCTAATTTAATTACGT
>Swoo_3601(SO1118) Score=4.7 Pos=-195 [Shewanella woodyi ATCC 51908]
TTGTAATAAACTTTCAG
>Swoo_1282(phk) Score=5.8 Pos=-75 [Shewanella woodyi ATCC 51908]
TTGTAATAAAATTACAA
>Swoo_2540(hexR) Score=4.8 Pos=-150 [Shewanella woodyi ATCC 51908]
TTGTGATTAAATTACTA
>Swoo_2540(hexR) Score=5 Pos=-248 [Shewanella woodyi ATCC 51908]
TTGTAATATAACAACAG
>Swoo_2715(ppsA) Score=5.5 Pos=-114 [Shewanella woodyi ATCC 51908]
TAGTAATAAAATTACAA
>Swoo_2393(gapA2) Score=4.6 Pos=-51 [Shewanella woodyi ATCC 51908]
TGGTAATTTTACTACCA
>Swoo_2539(zwf) Score=5 Pos=-77 [Shewanella woodyi ATCC 51908]
CTGTTGTTATATTACAA
>Swoo_2539(zwf) Score=4.8 Pos=-175 [Shewanella woodyi ATCC 51908]
TAGTAATTTAATCACAA
>Swoo_2395(gapB) Score=4.9 Pos=-179 [Shewanella woodyi ATCC 51908]
TGCTAATAAAATTACAA
# TF - GlmR: Swoo_4893
>Swoo_4893(glmR) Score=6.4 Pos=-33 [Shewanella woodyi ATCC 51908]
ATCTTTCGAAACGAAACTT
# TF - GcvA: Swoo_3471
>Swoo_3471(gcvA) Score=5.6 Pos=-38 [Shewanella woodyi ATCC 51908]
ATTAGAAAAACTAAT
>Swoo_1346(SO3342) Score=4.6 Pos=-173 [Shewanella woodyi ATCC 51908]
ATTAGCTAAACTAAA
>Swoo_1346(SO3342) Score=5.6 Pos=-98 [Shewanella woodyi ATCC 51908]
ATTAGAAAAACTAAT
>Swoo_2736(SO2753) Score=5.6 Pos=-280 [Shewanella woodyi ATCC 51908]
ATTAGTTTATCTAAT
>Swoo_1806(sdaA) Score=4.7 Pos=-206 [Shewanella woodyi ATCC 51908]
CTTAGCTTATCTAAT
>Swoo_1806(sdaA) Score=4.8 Pos=-179 [Shewanella woodyi ATCC 51908]
ATTAAAAAAACTCAT
>Swoo_3969(gcvT) Score=4.8 Pos=-229 [Shewanella woodyi ATCC 51908]
ATGAGAAAAAGTAAT
>Swoo_0065(kbl) Score=4.6 Pos=-148 [Shewanella woodyi ATCC 51908]
ATTAGTTTTTTTTAT
# TF - GalR: Swoo_2083
>Swoo_2083(galR) Score=4.9 Pos=-18 [Shewanella woodyi ATCC 51908]
TAATGTAAACGTTATCTTAT
>Swoo_2084(galT2) Score=5.8 Pos=-51 [Shewanella woodyi ATCC 51908]
AAATGGAAACGTTTACATTT
# TF - FadR: Swoo_2689
>Swoo_3037(fadL) Score=4.6 Pos=-127 [Shewanella woodyi ATCC 51908]
ATCTGGTCGGAGTTGTT
>Swoo_3027(fadI) Score=5.2 Pos=-116 [Shewanella woodyi ATCC 51908]
TAATGGTCAGACCTGTT
>Swoo_4327(SO0572) Score=4.3 Pos=45 [Shewanella woodyi ATCC 51908]
ttCTGGaCTGACCAGTg
>Swoo_0090(SO4716) Score=4.8 Pos=-111 [Shewanella woodyi ATCC 51908]
TACTGGACAGACCAGTT
>Swoo_2689(fadR) Score=3.4 Pos=-55 [Shewanella woodyi ATCC 51908]
CTCTGGTATGATCAGTG
>Swoo_2604(fadE) Score=4.2 Pos=-95 [Shewanella woodyi ATCC 51908]
CACAGGTCTGACCACAA
# TF - FabR: Swoo_4711
>Swoo_1424(pfaR) Score=4.6 Pos=-205 [Shewanella woodyi ATCC 51908]
AATAAACACGTGTAAGCT
>Swoo_4712(OLE1) Score=6.3 Pos=-41 [Shewanella woodyi ATCC 51908]
AGCGTACAGATGTACGCT
>Swoo_2594(hylII) Score=6.5 Pos=-88 [Shewanella woodyi ATCC 51908]
AGCTTACACGTGTACGCT
>Swoo_4860(lcfE) Score=5 Pos=-34 [Shewanella woodyi ATCC 51908]
GAGGTACACCTGTACGCT
>Swoo_3037(fadL) Score=5.3 Pos=-318 [Shewanella woodyi ATCC 51908]
AGCTTACAACTGTACACC
>Swoo_1504(fadE3) Score=6.1 Pos=-167 [Shewanella woodyi ATCC 51908]
AGCGTACAGGTGTAAGCC
>Swoo_4711(fabR) Score=6.3 Pos=-128 [Shewanella woodyi ATCC 51908]
AGCGTACATCTGTACGCT
>Swoo_2148(fabA) Score=6.3 Pos=-56 [Shewanella woodyi ATCC 51908]
AGCTTACACGTGTTCGCT
# TF - DeoR: Swoo_3424
>Swoo_3422(deoD) Score=5.3 Pos=-116 [Shewanella woodyi ATCC 51908]
TGCGGACTTTTGTCCTTA
# TF - CueR: Swoo_3192
>Swoo_3192(cueR) Score=5.8 Pos=-60 [Shewanella woodyi ATCC 51908]
TGTCTCCCCTTATGGGAGGGT
>Swoo_3191(copA) Score=5.8 Pos=-81 [Shewanella woodyi ATCC 51908]
ACCCTCCCATAAGGGGAGACA
# TF - CalR: Swoo_4065
>Swoo_4064(calB) Score=6.6 Pos=-77 [Shewanella woodyi ATCC 51908]
GACCGACCAATCAGTCGGTT
# TF - BirA: Swoo_4706
>Swoo_1865(bioA) Score=8 Pos=-44 [Shewanella woodyi ATCC 51908]
CTGTCAACG---------------GGTTTACTA
>Swoo_1866(bioB) Score=8 Pos=-99 [Shewanella woodyi ATCC 51908]
TAGTAAACC---------------CGTTGACAG
# TF - BglR: Swoo_1145
>Swoo_1144(omp(Bgl)) Score=6.5 Pos=-109 [Shewanella woodyi ATCC 51908]
AATGTAAGCGCTTACAAT
>Swoo_1147(bglA1) Score=6.4 Pos=-199 [Shewanella woodyi ATCC 51908]
GATGTAAGCGCTTTCATT
>Swoo_1148(glcP) Score=6.4 Pos=-127 [Shewanella woodyi ATCC 51908]
AATGAAAGCGCTTACATC
# TF - BetI: Swoo_1198
>Swoo_1198(betI) Score=7.5 Pos=-83 [Shewanella woodyi ATCC 51908]
TTAATTGAACGTTCAATTAA
# TF - AzrR: Swoo_1048
>Swoo_1048(azrR) Score=5.9 Pos=-104 [Shewanella woodyi ATCC 51908]
CTTTACTAAGTAATGTAAAG
>Swoo_1047(azr) Score=5.9 Pos=-63 [Shewanella woodyi ATCC 51908]
CTTTACATTACTTAGTAAAG
# TF - ArgR: Swoo_1001
>Swoo_0655(astC) Score=4.2 Pos=-245 [Shewanella woodyi ATCC 51908]
TATGACTAAATATGCTCT
>Swoo_0978(SO0762) Score=4.2 Pos=-125 [Shewanella woodyi ATCC 51908]
TGCGCATAAAAACTCAAT
>Swoo_0442(ilvG) Score=4.2 Pos=-190 [Shewanella woodyi ATCC 51908]
CGTGATTATTAAATCACA
>Swoo_0330(argB) Score=4.9 Pos=-51 [Shewanella woodyi ATCC 51908]
AGTGCATAAAGATTCATT
>Swoo_0949(Swoo_0949) Score=5 Pos=-92 [Shewanella woodyi ATCC 51908]
ACTGAATTTATATTCGCT
>Swoo_3041(aprE) Score=4.2 Pos=-240 [Shewanella woodyi ATCC 51908]
GTCGCATATTAATTCAGG
>Swoo_3520(argW) Score=4.6 Pos=-89 [Shewanella woodyi ATCC 51908]
CATGAATGGATATTCAGT
>Swoo_4648(aprE2) Score=4.4 Pos=-113 [Shewanella woodyi ATCC 51908]
AGTGAATAATTAGTTATT
>Swoo_4648(aprE2) Score=4.1 Pos=-225 [Shewanella woodyi ATCC 51908]
TCTAAATATTTACGCATT
>Swoo_4558(argA) Score=4.9 Pos=-198 [Shewanella woodyi ATCC 51908]
TGTGAAAAAATATTCAGT
>Swoo_4055(SO3392) Score=3.9 Pos=-59 [Shewanella woodyi ATCC 51908]
CTTGAATGATCGTTCAAA
>Swoo_1001(argR) Score=5 Pos=-95 [Shewanella woodyi ATCC 51908]
ATTGCATTCTTATTCATT
>Swoo_2082(hisF) Score=4.8 Pos=-153 [Shewanella woodyi ATCC 51908]
ACTGCATTGTTATGCACC
>Swoo_2092(hisG) Score=4.7 Pos=-317 [Shewanella woodyi ATCC 51908]
ATTGATTAGATATTCATA
>Swoo_2565(omp(Arg)) Score=3.9 Pos=-598 [Shewanella woodyi ATCC 51908]
TGTGCATATAATTTAATC
>Swoo_2565(omp(Arg)) Score=4.3 Pos=-551 [Shewanella woodyi ATCC 51908]
GATGAGTATATATTGATT
>Swoo_4055(SO3392) Score=4.5 Pos=-83 [Shewanella woodyi ATCC 51908]
TTTGAATGTTTGTTCAAA
>Swoo_4055(SO3392) Score=4.4 Pos=-32 [Shewanella woodyi ATCC 51908]
CTTGAATGAACATTCAAG
>Swoo_0328(argE) Score=4 Pos=-28 [Shewanella woodyi ATCC 51908]
TTTGAATATATATTTTAC
>Swoo_4558(argA) Score=5.6 Pos=-84 [Shewanella woodyi ATCC 51908]
AGTGAATTAAAATGCAAT
>Swoo_1802(astB) Score=5 Pos=-204 [Shewanella woodyi ATCC 51908]
TGTGAATTTCAATGCAAA
>Swoo_1802(astB) Score=4 Pos=-236 [Shewanella woodyi ATCC 51908]
ATTTCATTATTAGTCATC
>Swoo_1221(gltB) Score=3.9 Pos=-314 [Shewanella woodyi ATCC 51908]
ATTCATTATATTTGCAAT
>Swoo_1221(gltB) Score=4.7 Pos=-349 [Shewanella woodyi ATCC 51908]
ACTGCATAAATAAGCAAA
>Swoo_0329(argC) Score=4 Pos=-263 [Shewanella woodyi ATCC 51908]
GTAAAATATATATTCAAA
>Swoo_0329(argC) Score=3.5 Pos=-423 [Shewanella woodyi ATCC 51908]
TTTGCATTCAAAACCAAG
>Swoo_3337(oadG) Score=4.4 Pos=-110 [Shewanella woodyi ATCC 51908]
AATGAATAAAAAGTTATT
# TF - MetR: Swoo_3732
>Swoo_3732(metR) Score=3.8 Pos=-59 [Shewanella woodyi ATCC 51908]
GGGAATAGATTTCAA
>Swoo_3732(metR) Score=4.3 Pos=-192 [Shewanella woodyi ATCC 51908]
ATGAGCAAAATTCAG
>Swoo_3732(metR) Score=4.5 Pos=-37 [Shewanella woodyi ATCC 51908]
ATGAGTGAAACTCAT
>Swoo_1380(glyA) Score=4.1 Pos=-119 [Shewanella woodyi ATCC 51908]
GTGAGTCATGTTCAT
# TF - LexA: Swoo_0180
>Swoo_3340(recA) Score=5.5 Pos=-124 [Shewanella woodyi ATCC 51908]
TACTGTATGACTATACAGTA
>Swoo_3359(recN) Score=5.9 Pos=-64 [Shewanella woodyi ATCC 51908]
TACTGTATTTATGAACAGTA
>Swoo_3359(recN) Score=5.9 Pos=-42 [Shewanella woodyi ATCC 51908]
TACTGTTCATAAATACAGTA
>Swoo_2976(topB) Score=5.4 Pos=-35 [Shewanella woodyi ATCC 51908]
TACTGGTAATTTATACAGTG
>Swoo_0180(lexA) Score=5 Pos=-26 [Shewanella woodyi ATCC 51908]
TACTGTATAGAAAGACAGGA
>Swoo_3604(dinB) Score=6 Pos=-52 [Shewanella woodyi ATCC 51908]
CACTGTTTTTATATACAGTA
>Swoo_2130(yebG) Score=5.9 Pos=-31 [Shewanella woodyi ATCC 51908]
AACTGTATATAAAAACAGTA
>Swoo_0180(lexA) Score=5.3 Pos=-45 [Shewanella woodyi ATCC 51908]
TACTGTATATACTGACAGTT
>Swoo_3086(dinG) Score=5.1 Pos=-37 [Shewanella woodyi ATCC 51908]
CACTGTTATTATGTACAGCT
>Swoo_2465(umuD) Score=5.3 Pos=-38 [Shewanella woodyi ATCC 51908]
TACTGTATAAAAACACAGTT
>Swoo_4592(recG) Score=5 Pos=-68 [Shewanella woodyi ATCC 51908]
ATATGTATATAAATACAGTG
>Swoo_4307(xerD) Score=5.8 Pos=-48 [Shewanella woodyi ATCC 51908]
CACTGTTTTTTTATACAGTA
# RNA - FMN
>Swoo_4764(ribB) Score=52.7 Pos=-401 [Shewanella woodyi ATCC 51908]
TAAATTCTCAGGGCGGGGTGAAACTCCCCACCGGCGGTGATAGCGCTTAAATTAACCTAAGCCTTAAGCCCGCGAGCGCCCAAATCAACTTAACATTGAAGATGTAAGCTGATTTGGGG
# RNA - TPP
>Swoo_2592(thiC) Score=76.3 Pos=-243 [Shewanella woodyi ATCC 51908]
TGGCATCTTGTCGGAGTGCCTAAAGGCTGAGACCGTTAATTCGGGATCCGTTGAACCTGATCGGGTTAATACCCGCGAAGGAAACAAGCATGATAAAAAC
>Swoo_1886(omp_thi) Score=70.5 Pos=-188 [Shewanella woodyi ATCC 51908]
CCGGCGCCAAGGGGTGATGCTGCATATAATGCGGCATCTGAGATGTCTTATGACAAACCCTTTGAACCTGATCCGGCTTATACCGGCGTAGGAATGGGCCAAATTTTGATCGT
# RNA - Cobalamin
>Swoo_3735(btuB) Score=57.4 Pos=-331 [Shewanella woodyi ATCC 51908]
CCTAAGGCTTTATTAAGTCGGATTTTAATGGGAGAGGGAAGGATAATCGGGAAGCCTGTGGAAATCTGGCACTGCCCCCGCAACGGTGAATGGTAAGAGTTAGGCGCGCTTATTTTATCAACAAGATAATGGGTGTTAAAAAAGTCTAAACTTGTGCTGTTTTTCTTTAGGAAATGCAGCAATACCTAAGTCCGGAGACCGGCCCATTTGATGATTTTGAGA
>Swoo_4086(btuD) Score=44.1 Pos=-401 [Shewanella woodyi ATCC 51908]
AGGCAGATCCGCAAAGTGAGGTGTTGAGAGCGAGCAAGTGCTGAGTACAACAAAGCGCTTGAAAGTGAACTCAACCTTAAAAGGGAATTGGGGAGTAGCATTTAGCTATTAATGGCCCAAACTGTACCCGCAACTGTATGTGTTTTAAAGAGGTCGTTAGGATCTAACCTAGGACCTAGGACATGAGTACCTCTTTAAACCATGAGTCAGGATACCTGCCTAACTTTGTCGCTAAAAA
# RNA - Lysine
>Swoo_3234(lysW) Score=108.9 Pos=-327 [Shewanella woodyi ATCC 51908]
CCTGAGAAGTAGAGGTGCATTAAATATTAGTAGTGATAATCAGGGTGATTCCGCTTATCTATCATGAAAGGATTTAATGCCGAAGTAGTAATACATATCACGGTTTACTGCTGGGGCTGCAATCGAATAGGTGCAGCACTGCCATAGTATTTCTTATCCGGAAGATAAGAAGATTTTATACCTTTTAATTACTGGTATTACTATGGAGCGCTACTGATAGG
>Swoo_3764(lysC) Score=79 Pos=-309 [Shewanella woodyi ATCC 51908]
GGTACAGAAGAGGTGCGTTAACTAGGTAGTAAGTCTGAGAAGTCCAAACTTTGATGATGGCTTATGAGGGAGATTAACGCCGAGGTGTTGCAGTGTTTGGAATCACTCAATATCGGTCGAATGGGCTGAATCCCATAGATTGTCACCTTTTATTGGTGGAGAGCTTCTGGTGGTGA
# RNA - Glycine
>Swoo_3785(glyP) Score=53.2 Pos=-320 [Shewanella woodyi ATCC 51908]
GCCTCTGGAGAGACTGTGAGCAGCTAAGTGTTCGTCAACTTAACTGTCACACAGCGCCGAAGGCGAAAGTGTTAGCCCAAATGGCAAACGCGAAACGCTCAGGCAAAAGGACAGAGG
>Swoo_3785(glyP) Score=35.8 Pos=-444 [Shewanella woodyi ATCC 51908]
GATGAAGGTAGCAGGAGAGTGGGGAATTGCCCCCACACCGACGAGGCAACTTTAGATCTGTTTGATTTGGTCTAAATACTCTTTCAGGTGCCAATTGTGATTGGCGTGGACTGTTACTGGACG
# RNA - Purine
>Swoo_1121(add) Score=71.7 Pos=-241 [Shewanella woodyi ATCC 51908]
CCTCCACAAAACTTAAGCTTCGTATAATCCCAATGATATGGTTTGGGAGTTTCTACCAAGAGCCTTAAATTCTTGATTATGAAGTCTGTAGCTTTATATAC
# RNA - MOCO_RNA_motif
>Swoo_4793(moaA) Score=96.9 Pos=-123 [Shewanella woodyi ATCC 51908]
CTCACTGACGGTTCTCCGAGCTTTTTGTCCTACGTCAACAGATATGGACGCTAAGCCGTGGCAATATCGCCACCGGGGTGTGATAAGAAATTCTCTCACCTCCCCTTACTTGGAAAGGTGATCATGTCTCAACTAC
# RNA - GEMM_RNA_motif
>Swoo_3879(cbp) Score=63.4 Pos=-225 [Shewanella woodyi ATCC 51908]
TCCATGTATTTGGCAAACTAGCTGAAAAGTTAGGACGCAAAGCTTCCGGTCTAAGGTGCAGGACTCACTGAGTGCTCATTAAGATAGCGGGGTTGCCACG
>Swoo_1100 Score=60.8 Pos=-270 [Shewanella woodyi ATCC 51908]
ATGTACAAAGGCAAACCAATCGAAAGGTTGGGACGCAAAGCTTCCGGTCTAAGGGGATAGTGTTTGAGAGGGTCGCACTCTTAACGTTATTTTGGTACCTATGATAGCGGGGATGTTACAGG
# RNA - yybP-ykoY
>Swoo_3880(COG2119) Score=62.5 Pos=-228 [Shewanella woodyi ATCC 51908]
CCACTACTTCAGGGGAGTAGCCACCAAAGATTTTCTACCATTAGAGAATAGTTGGGTGAACATCAACATACTTGGCCACATCGCCATGGTGTTCACGACAATCACACTTAAGCTGAGATTGTTAGGCAAGACCTGAGTGCAGTTACC
# RNA - His_leader
>Swoo_2092(hisG) Score=46.8 Pos=-207 [Shewanella woodyi ATCC 51908]
TGCATCATCACCACCATATGCGGTAGCCTTCGGAAGCTCACTGCCGAAGGAGACTATCCTTCTGGCGGTTGATTCAAGAATATCAAAACCCCTGGAAGGAATTCCGGGGGTTTTTCGTT
# RNA - Leu_leader
>Swoo_4550(leuA) Score=24.8 Pos=-199 [Shewanella woodyi ATCC 51908]
AGATGAATATTAGCCGTGCATTACTCAACCTCCTCATTCTCATTCTCGCAGTTTCTGCGCGGAGGATGTAGTGTTGCACGCTTGATTAGAGTCACCAACATTCAAAACCCCGCGCTACGAATCGCGGGGTTTTTT
# RNA - S15
>Swoo_3558(rpsO) Score=90.6 Pos=-61 [Shewanella woodyi ATCC 51908]
TCGCTTTAGCTGAGTTAGTGATTGGCTAAAGATTTATTAATGCATTATTTGGAGAGACAACATGTCACTAAATGCTGAACAAACTGCATCTATCCTGGCTGAATTCGGTCGTTGTGAA
# RNA - Thr_leader
>Swoo_1270(thrA) Score=39.2 Pos=-158 [Shewanella woodyi ATCC 51908]
AAATCGAGTTGTAACCACCATTATTACAACCACCACGATTACATTCGTGGGGGCAGGCTAAACGTACTTAAATTTTTTTGAATATGACAAGCCCGCTCCCACACCAAGGAGCGGGCTTTTTTGTTTC
# RNA - Trp_leader
>Swoo_2912(trpE) Score=49.4 Pos=-179 [Shewanella woodyi ATCC 51908]
TCAATTGGTGGTGGCACTTCCCTAACTAGCGGGTGGTGTGAAACTCTGTGCTCATGTAAAAGAGACAAGATTCAACAATAAGCCCGCATAGATTGCGGGCTTTTTTGTAC
# TF - Fur: Swoo_1842
>Swoo_0123 Score=5.2 Pos=-85 [Shewanella woodyi ATCC 51908]
AAATACAAAGCGTTATCATTT
>Swoo_1070(Swoo_1070) Score=6.2 Pos=-49 [Shewanella woodyi ATCC 51908]
AAATGATATTAATTCTCATTT
>Swoo_3608(bfr2) Score=4.5 Pos=-167 [Shewanella woodyi ATCC 51908]
AAATGATAATGCTTAATGTTA
>Swoo_2977 Score=6.3 Pos=-70 [Shewanella woodyi ATCC 51908]
AATTGAGAATAATTCTCATTT
>Swoo_3124(omcA2) Score=4.6 Pos=-79 [Shewanella woodyi ATCC 51908]
GAATAAGAATCACTCTTATCT
>Swoo_4887 Score=6.3 Pos=-50 [Shewanella woodyi ATCC 51908]
AAATGAGAACCATTATCATTT
>Swoo_4187(bfd) Score=5.6 Pos=-56 [Shewanella woodyi ATCC 51908]
CATTGAGAATCGTTTTCATTT
>Swoo_4766(ftn) Score=5.7 Pos=-176 [Shewanella woodyi ATCC 51908]
TAATGAGAATTATTTGTATTT
>Swoo_3123(feoA) Score=5.6 Pos=-125 [Shewanella woodyi ATCC 51908]
AATTGAAAACTATTATCGTTT
>Swoo_4004(hmuA) Score=6.5 Pos=-113 [Shewanella woodyi ATCC 51908]
AAATGATAATGATTTTCATTT
>Swoo_0996(fbpA) Score=5.4 Pos=-57 [Shewanella woodyi ATCC 51908]
AATTGATAACTATTATCATCG
>Swoo_0997(fbpB) Score=5.5 Pos=-79 [Shewanella woodyi ATCC 51908]
AATTAATAATCGTTTTTATTT
>Swoo_0585(IucABC) Score=5.9 Pos=-62 [Shewanella woodyi ATCC 51908]
TAATGGGAATAATTATCATTT
>Swoo_1339 Score=6 Pos=-42 [Shewanella woodyi ATCC 51908]
AAATGATAATGATTATCAGTT
>Swoo_3123(feoA) Score=4.8 Pos=-218 [Shewanella woodyi ATCC 51908]
TAGTGATAATCGTTCTCACAA
>Swoo_2428(Sfri_2008) Score=5.9 Pos=-62 [Shewanella woodyi ATCC 51908]
AGTTGATAACCATTCTCATTT
>Swoo_4005(tonB) Score=6.5 Pos=-80 [Shewanella woodyi ATCC 51908]
AAATGAAAATCATTATCATTT
>Swoo_3788(Sfri_4035) Score=5.4 Pos=-83 [Shewanella woodyi ATCC 51908]
GAATGATAACAATTTGCATTA
>Swoo_0790(Sfri_0810) Score=5.8 Pos=-79 [Shewanella woodyi ATCC 51908]
TAATGAAAACGATTCGCATTT
>Swoo_1505(Sfri_0202) Score=5.4 Pos=-25 [Shewanella woodyi ATCC 51908]
AAATGATAATTATTTGTATAT
>Swoo_1506 Score=5.4 Pos=-350 [Shewanella woodyi ATCC 51908]
AAATGATAATTATTTGTATAT
>Swoo_2294 Score=5.4 Pos=-36 [Shewanella woodyi ATCC 51908]
TGTTGATAATTGTTCGCATTT
>Swoo_4894 Score=6.2 Pos=-67 [Shewanella woodyi ATCC 51908]
AAATAAAAATAATTCTCATTT
>Swoo_3375 Score=6 Pos=-51 [Shewanella woodyi ATCC 51908]
TAATGATAATCGTTATCATCT
>Swoo_3151 Score=5.2 Pos=-66 [Shewanella woodyi ATCC 51908]
CAATGCTAATGATTTTCAACT
>Swoo_3307 Score=5.7 Pos=-96 [Shewanella woodyi ATCC 51908]
AAATAAAAACCGTTCTCATTA
>Swoo_2460(Sbal_0657) Score=5.8 Pos=-120 [Shewanella woodyi ATCC 51908]
TATTGATAATAAATATCATTT
>Swoo_2596 Score=5.6 Pos=-48 [Shewanella woodyi ATCC 51908]
AATTGCGAACAATTATCATTA
>Swoo_3787(Sama_0590) Score=5.5 Pos=-2 [Shewanella woodyi ATCC 51908]
AAATGATAATCAATCCCATTA
>Swoo_0946 Score=5.9 Pos=-81 [Shewanella woodyi ATCC 51908]
AATTGATAATCGTTATCAATT
# TF - Crp: Swoo_0662
>Swoo_0885(cadC) Score=4.5 Pos=-145 [Shewanella woodyi ATCC 51908]
CAATGTGATCCTCTTCGCAAAC
>Swoo_1222(SO1326) Score=3.8 Pos=-229 [Shewanella woodyi ATCC 51908]
AAATATGAGTTCTATTGCAAAT
>Swoo_4279(scrA) Score=4.2 Pos=-154 [Shewanella woodyi ATCC 51908]
AACTGTGTTATTCATCACGATT
>Swoo_3123(feoA) Score=4.2 Pos=-157 [Shewanella woodyi ATCC 51908]
AGTTGGGACTTTTGTCACATAA
>Swoo_3123(feoA) Score=4.7 Pos=-272 [Shewanella woodyi ATCC 51908]
AATCGTGACTTATATCACTTAA
>Swoo_0885(cadC) Score=4.2 Pos=-232 [Shewanella woodyi ATCC 51908]
AATGGTGAGCTGGATCATGTTA
>Swoo_4355(SO0543) Score=3.8 Pos=-215 [Shewanella woodyi ATCC 51908]
AATTGCTAGATAGATCTCACTT
>Swoo_4893(deoR) Score=3.8 Pos=-91 [Shewanella woodyi ATCC 51908]
CTTTTTGATCTTTATCTAGTTT
>Swoo_1001(argR) Score=4.5 Pos=-311 [Shewanella woodyi ATCC 51908]
TTTTGTGATGTAGGTCTACATT
>Swoo_4512(Sputcn32_0539) Score=3.9 Pos=-127 [Shewanella woodyi ATCC 51908]
ATTCATGATCCTCTTCACGCAG
>Swoo_0793(hemG) Score=4.3 Pos=-123 [Shewanella woodyi ATCC 51908]
AATTGTGATATAGGTAAGAGTA
>Swoo_0285(acnB) Score=4.4 Pos=-139 [Shewanella woodyi ATCC 51908]
GAGTGTGATCTGATTCAAACTT
>Swoo_1265(SO3421) Score=4.9 Pos=-234 [Shewanella woodyi ATCC 51908]
AGTCGTGATCTTGATCACGTTT
>Swoo_1749(SO3120) Score=4.2 Pos=-214 [Shewanella woodyi ATCC 51908]
AAACGCGATCTAAGTCACTTAA
>Swoo_0327(ppc) Score=4.7 Pos=-111 [Shewanella woodyi ATCC 51908]
AGAAGTGATGTAGAACACATAA
>Swoo_4839(hutC) Score=4.1 Pos=-201 [Shewanella woodyi ATCC 51908]
AAGTGTGATCCAACTTGTATTT
>Swoo_2048(cdd) Score=3.9 Pos=-82 [Shewanella woodyi ATCC 51908]
AAATGGGAGAAAGATCCCATTA
>Swoo_1002(mdh) Score=3.8 Pos=-47 [Shewanella woodyi ATCC 51908]
AATGTAGACCTACATCACAAAA
>Swoo_2702(icd) Score=3.9 Pos=-304 [Shewanella woodyi ATCC 51908]
AAGTGTGATCTAAGCCAAGTTG
>Swoo_0972(nrfA) Score=4.4 Pos=-154 [Shewanella woodyi ATCC 51908]
AAATGTGAGCAACAACACGTTT
>Swoo_3036(putP) Score=4.4 Pos=-86 [Shewanella woodyi ATCC 51908]
GTATATGACCCAGTTCACATTT
>Swoo_0508(fdrC) Score=4.7 Pos=-109 [Shewanella woodyi ATCC 51908]
TGATTTGATCTGTCTCACAGTA
>Swoo_4740(pckA) Score=3.8 Pos=-100 [Shewanella woodyi ATCC 51908]
AATCGTGACATAGCGCAAAGAC
>Swoo_0662(crp) Score=3.8 Pos=-173 [Shewanella woodyi ATCC 51908]
TTAGTTGACTTATATCACTAAT
>Swoo_1933(hmgR) Score=4.5 Pos=-116 [Shewanella woodyi ATCC 51908]
ATGTGTGATCTAAGTATCAATT
>Swoo_3548(deoA) Score=4.2 Pos=-157 [Shewanella woodyi ATCC 51908]
AAGTGTGATCTAAATCTAGTTG
>Swoo_4109(napD) Score=4.4 Pos=-179 [Shewanella woodyi ATCC 51908]
AAATGTGAACTCCATCACGCAC
>Swoo_4109(napD) Score=3.9 Pos=-155 [Shewanella woodyi ATCC 51908]
AATATTGATCTTGATCGACTAA
>Swoo_3207(ompW) Score=4.3 Pos=-211 [Shewanella woodyi ATCC 51908]
AATTATGACGTCGCTCACTAAA
>Swoo_2563(gloA) Score=3.8 Pos=-243 [Shewanella woodyi ATCC 51908]
TTTTATGACTCTATTAATATAA
>Swoo_4658(scyA) Score=3.8 Pos=-256 [Shewanella woodyi ATCC 51908]
CAATTTGATATGCTTCCAAAAA
>Swoo_3788(Sfri_4035) Score=3.9 Pos=-106 [Shewanella woodyi ATCC 51908]
TTTGTTGATCTTAATCAAAAAC
>Swoo_1282(phk) Score=4.4 Pos=-238 [Shewanella woodyi ATCC 51908]
TCGCGTGATCACGATCACACTT
>Swoo_0483(hemC) Score=4.6 Pos=-229 [Shewanella woodyi ATCC 51908]
AAATGAGACCAAGATCACACTT
>Swoo_1833(sdhC) Score=4.8 Pos=-87 [Shewanella woodyi ATCC 51908]
ATTTGTGATCTAAATCACGCCT
>Swoo_4794(etfD) Score=4.7 Pos=-135 [Shewanella woodyi ATCC 51908]
TTTTGTGACGACACTCACATTC
>Swoo_0881(cadC) Score=3.7 Pos=-116 [Shewanella woodyi ATCC 51908]
ATATGAGCGCTAAATCACGCTT
>Swoo_0294(SO0439) Score=3.9 Pos=-78 [Shewanella woodyi ATCC 51908]
AAACAGGACGTAGATCACACTT
>Swoo_4456(mccA) Score=4 Pos=-160 [Shewanella woodyi ATCC 51908]
AAGTGTGCTTTAGCGCAGATTT
>Swoo_1050(SO3588) Score=3.9 Pos=-309 [Shewanella woodyi ATCC 51908]
TTGTGTGATAAGGGTCTTGTTT
>Swoo_0710(cydD) Score=4.1 Pos=-149 [Shewanella woodyi ATCC 51908]
TTTATTGATCTAGCTCAATTTT
>Swoo_2565 Score=4.9 Pos=-321 [Shewanella woodyi ATCC 51908]
TTCTGTGACCTGTGTCACAAAA
>Swoo_3550(tsx) Score=3.7 Pos=-103 [Shewanella woodyi ATCC 51908]
TGTTGTGCTTTAGCACAGAATA
>Swoo_0057(cytcB) Score=4.4 Pos=-96 [Shewanella woodyi ATCC 51908]
AAATATTACCTCGATCACAATA
>Swoo_2973(swp_4302) Score=4 Pos=-185 [Shewanella woodyi ATCC 51908]
TTCAGTGATGTAGAACTCAAAA
>Swoo_0239 Score=4 Pos=-92 [Shewanella woodyi ATCC 51908]
TAACTTGATTTGAATCAATATT
>Swoo_4247(SO3967) Score=3.8 Pos=-91 [Shewanella woodyi ATCC 51908]
AAGTGTTATAAACATCATTTTA
>Swoo_1715(phhA) Score=4.7 Pos=-74 [Shewanella woodyi ATCC 51908]
AAGTGTGAAGTGGTTAACAAAA
>Swoo_4477(mccA) Score=3.9 Pos=-87 [Shewanella woodyi ATCC 51908]
AATTGTTAAGTTGTTCAGCTAA
>Swoo_4659(ccmA) Score=4.2 Pos=-224 [Shewanella woodyi ATCC 51908]
TTTTATGACTTTAATCAAAGTA
>Swoo_0508(fdrC) Score=4 Pos=-79 [Shewanella woodyi ATCC 51908]
ATTTGTGAGCGACATTATCTAA
>Swoo_1283(SO3541) Score=4.2 Pos=-215 [Shewanella woodyi ATCC 51908]
AAGTGTGATCGTGATCACGCGA
>Swoo_0967(SO1064) Score=3.8 Pos=-92 [Shewanella woodyi ATCC 51908]
ATATGATATTCCAATTACATTA
>Swoo_0714(SO3774) Score=3.9 Pos=-176 [Shewanella woodyi ATCC 51908]
AAGAGTGTCCCTCGTCACATTT
>Swoo_3320(SO3553) Score=3.7 Pos=-288 [Shewanella woodyi ATCC 51908]
TCCAGCGACTTAGATCACATTT
>Swoo_3466(icd) Score=4.3 Pos=-148 [Shewanella woodyi ATCC 51908]
AAACGTGAGACTGCTCACTATT
>Swoo_0968(fkpA) Score=4.2 Pos=-95 [Shewanella woodyi ATCC 51908]
TAATGTAATTGGAATATCATAT
>Swoo_4166(petA) Score=3.8 Pos=-129 [Shewanella woodyi ATCC 51908]
TACTATGATCTGCTTCTGATTT
>Swoo_4765(SO0141) Score=4 Pos=-240 [Shewanella woodyi ATCC 51908]
AATCGTGACTTAGATTAGACTT
>Swoo_0284(yniC) Score=4.2 Pos=-296 [Shewanella woodyi ATCC 51908]
AAGTTTGAATCAGATCACACTC
>Swoo_4819(SO4503) Score=4.3 Pos=-163 [Shewanella woodyi ATCC 51908]
TTTTTTGAGCTAGATCATCAAA
>Swoo_2168(SO2871) Score=4.2 Pos=-66 [Shewanella woodyi ATCC 51908]
CCTTGTGACTTCGCTCACCTTT
>Swoo_3332(Shew_1222) Score=4 Pos=-69 [Shewanella woodyi ATCC 51908]
GAAGGTGATTAATATCACGTTA
>Swoo_0971(narQ) Score=4.8 Pos=-112 [Shewanella woodyi ATCC 51908]
AAACGTGTTGTTGCTCACATTT
>Swoo_1750 Score=4.4 Pos=-148 [Shewanella woodyi ATCC 51908]
TTAAGTGACTTAGATCGCGTTT
>Swoo_4793(moaA) Score=4.3 Pos=-222 [Shewanella woodyi ATCC 51908]
GAATGTGAGTGTCGTCACAAAA
>Swoo_0663(sel1) Score=4.3 Pos=-298 [Shewanella woodyi ATCC 51908]
ATTAGTGATATAAGTCAACTAA
>Swoo_0863(SO0919) Score=4.2 Pos=-196 [Shewanella woodyi ATCC 51908]
AACTGAGAGGTGGATCACATTG
>Swoo_2142(ycbW) Score=4 Pos=-52 [Shewanella woodyi ATCC 51908]
TACTTTGATATTGAACAAAATA
>Swoo_3617(nqrA-2) Score=4 Pos=-46 [Shewanella woodyi ATCC 51908]
CAGCGTGATTGCGGTCGCAAAT
>Swoo_4860(SO0075) Score=4.6 Pos=-110 [Shewanella woodyi ATCC 51908]
ATCTGTGATCGGTTTAACACTA
>Swoo_2219(resA) Score=4.1 Pos=-140 [Shewanella woodyi ATCC 51908]
ATTTTTGATGCTAATCAAATGA
>Swoo_4477(mccA) Score=4.2 Pos=-342 [Shewanella woodyi ATCC 51908]
TTTTGTGACCTCTCTATCCTTT
>Swoo_4151(omp35) Score=4.3 Pos=-149 [Shewanella woodyi ATCC 51908]
AAGTTTGATCTAGTCCACAATC
>Swoo_4152(omp35) Score=3.3 Pos=-241 [Shewanella woodyi ATCC 51908]
AATTATTAACTCTTTCTTAAAT
>Swoo_4423(SO4118) Score=3.8 Pos=-345 [Shewanella woodyi ATCC 51908]
AAGTTTTATCTAGTTAACCCTT
>Swoo_4658(scyA) Score=3.9 Pos=-144 [Shewanella woodyi ATCC 51908]
TACTTTGATTAAAGTCATAAAA
>Swoo_1718(fahA) Score=5 Pos=-133 [Shewanella woodyi ATCC 51908]
TATTGTGATTTGTGTCACGCTA
>Swoo_2030(SO2589) Score=4.2 Pos=-82 [Shewanella woodyi ATCC 51908]
CAAGGTGATTTATCTCACACAG
>Swoo_3714(lipB) Score=5.1 Pos=-74 [Shewanella woodyi ATCC 51908]
AAGTGTGATCTAGCTTACAATT
>Swoo_0124(prlC) Score=4.2 Pos=-172 [Shewanella woodyi ATCC 51908]
TTTTTTGAGCTGGGTCAAAGTA
>Swoo_0123 Score=4.3 Pos=-153 [Shewanella woodyi ATCC 51908]
TACTTTGACCCAGCTCAAAAAA
>Swoo_0123 Score=3.9 Pos=-78 [Shewanella woodyi ATCC 51908]
AAGCGTTATCATTTACACATTA
>Swoo_1260(hcp) Score=4.2 Pos=-125 [Shewanella woodyi ATCC 51908]
GAATTTGATCTGTCTCAAACTT
>Swoo_0655(astC) Score=4.3 Pos=-172 [Shewanella woodyi ATCC 51908]
ATATGTGCTGCTGATCTTATTT
>Swoo_1225(cyaC) Score=4.3 Pos=-96 [Shewanella woodyi ATCC 51908]
TCATTTGACTAAGATCACAAAT
>Swoo_1565(cydA) Score=3.8 Pos=-204 [Shewanella woodyi ATCC 51908]
TTTTGTGAGATCGGTCGGAAAG
>Swoo_4150(SO3895) Score=5.1 Pos=-290 [Shewanella woodyi ATCC 51908]
CTTTGTGATATCAATCACAATA
>Swoo_2736(SO2753) Score=3.7 Pos=-259 [Shewanella woodyi ATCC 51908]
TAGTGTGATCTAGGTTGGGTAA
>Swoo_2742(SO2757) Score=4 Pos=-155 [Shewanella woodyi ATCC 51908]
TTTAGTGCTGTTATTTACACTT
>Swoo_0395(ygbA) Score=3.4 Pos=-82 [Shewanella woodyi ATCC 51908]
TTCTGTGCGCACCTTCATAGAT
>Swoo_0441(ilvC) Score=3.5 Pos=-78 [Shewanella woodyi ATCC 51908]
TATAGTGAATTCAATCACTGCT
>Swoo_1790 Score=4.1 Pos=-48 [Shewanella woodyi ATCC 51908]
TAAATTGATCTAGATCAATAAA
>Swoo_0296(purH) Score=3.6 Pos=-192 [Shewanella woodyi ATCC 51908]
TATTGTGAAATCACATATAAAT
>Swoo_0507(frdC1) Score=4.8 Pos=-138 [Shewanella woodyi ATCC 51908]
GTTTGTGATGTGGTTCAAAAAA
>Swoo_0508(fdrC2) Score=4.7 Pos=-109 [Shewanella woodyi ATCC 51908]
TGATTTGATCTGTCTCACAGTA
>Swoo_0508(fdrC2) Score=4 Pos=-79 [Shewanella woodyi ATCC 51908]
ATTTGTGAGCGACATTATCTAA
>Swoo_2603(SO2535) Score=4.8 Pos=-190 [Shewanella woodyi ATCC 51908]
TATATTGATCGATATCACAATT
>Swoo_0884(SO0939) Score=4.5 Pos=-250 [Shewanella woodyi ATCC 51908]
TAACATGATCCAGCTCACCATT
>Swoo_0884(SO0939) Score=3.7 Pos=-337 [Shewanella woodyi ATCC 51908]
GTTTGCGAAGAGGATCACATTG
>Swoo_1771(SO2806) Score=4.6 Pos=-81 [Shewanella woodyi ATCC 51908]
TATTGTGAAAGTCATCACACAG
>Swoo_4177 Score=4.5 Pos=-44 [Shewanella woodyi ATCC 51908]
AAGTTTGAGCTTGTTCAAATAT
>Swoo_3307(SO3406) Score=4.1 Pos=-141 [Shewanella woodyi ATCC 51908]
ATATGAGATGCAGCTCTCATCT
>Swoo_0195(cymA) Score=4.3 Pos=-152 [Shewanella woodyi ATCC 51908]
AATTTTTATATTTATCAAAATA
>Swoo_3027(fadI) Score=4.1 Pos=-138 [Shewanella woodyi ATCC 51908]
AAGTTAGAATCAGATCACATTT
>Swoo_0057(cytcB) Score=4.2 Pos=-157 [Shewanella woodyi ATCC 51908]
AAATATGATGTTTTGCACTTTA
>Swoo_0057(cytcB) Score=4.4 Pos=-96 [Shewanella woodyi ATCC 51908]
AAATATTACCTCGATCACAATA
>Swoo_0057(cytcB) Score=4.2 Pos=-157 [Shewanella woodyi ATCC 51908]
AAATATGATGTTTTGCACTTTA
>Swoo_0917(Sputcn32_0834) Score=3.7 Pos=-67 [Shewanella woodyi ATCC 51908]
TATTTTTACTTGCCTCAACTAA
>Swoo_0484(cyaA) Score=5 Pos=-98 [Shewanella woodyi ATCC 51908]
AAGTGTGATCTTGGTCTCATTT
>Swoo_3465(SO1539) Score=4.4 Pos=-159 [Shewanella woodyi ATCC 51908]
AATAGTGAGCAGTCTCACGTTT
>Swoo_0058(engB) Score=4.8 Pos=-110 [Shewanella woodyi ATCC 51908]
TATTGTGATCGAGGTAATATTT
>Swoo_3028(SO3090) Score=4.8 Pos=-306 [Shewanella woodyi ATCC 51908]
AAATGTGATCTGATTCTAACTT
>Swoo_3910(Spea_3921) Score=5.2 Pos=-48 [Shewanella woodyi ATCC 51908]
AAGTGTGACTTAGATCACACAA
>Swoo_3995(fadD-2) Score=3.7 Pos=-147 [Shewanella woodyi ATCC 51908]
AACCATGATCTATTTCGTAATT
>Swoo_4509(udp) Score=4.9 Pos=-272 [Shewanella woodyi ATCC 51908]
AAATGTGATGTGGGTCAACAAA
>Swoo_4509(udp) Score=4.7 Pos=-92 [Shewanella woodyi ATCC 51908]
AAGTGTGATCAAGTTAACCTTA
>Swoo_1282(phk) Score=3.8 Pos=-97 [Shewanella woodyi ATCC 51908]
AAACAAGATATAGAACACATTT
>Swoo_2762(Sfri_2271) Score=4.1 Pos=-220 [Shewanella woodyi ATCC 51908]
AAACTTGATTTCGCTCAAGTAA
>Swoo_1686(cysD) Score=4.2 Pos=-66 [Shewanella woodyi ATCC 51908]
TAAAGTGATGAATCTTAAATTT
>Swoo_2425(ccoN) Score=4.3 Pos=-220 [Shewanella woodyi ATCC 51908]
TAGCTTGATCTAGATCAACTTT
>Swoo_2425(ccoN) Score=4.4 Pos=-177 [Shewanella woodyi ATCC 51908]
TTTTTTGACATAGCTCAAGTAT
>Swoo_2110(fadD1) Score=5.1 Pos=-153 [Shewanella woodyi ATCC 51908]
TTATGTGATGATGTTCAAAATT
>Swoo_3320(SO3553) Score=3.7 Pos=-288 [Shewanella woodyi ATCC 51908]
TCCAGCGACTTAGATCACATTT
>Swoo_3207(ompW) Score=3.9 Pos=-108 [Shewanella woodyi ATCC 51908]
TTTATTGATTTGGATCAATAAA
>Swoo_3207(ompW) Score=4.5 Pos=-158 [Shewanella woodyi ATCC 51908]
AAGTGTGAGTTCGATCAAGTAT
>Swoo_0710(cydD) Score=4.7 Pos=-130 [Shewanella woodyi ATCC 51908]
TTTTGTGAATCTCTTAACATTT
>Swoo_3125(mtrC) Score=3.7 Pos=-288 [Shewanella woodyi ATCC 51908]
ATGAGTTACAACTTTCACACAT
>Swoo_4806(SO4520) Score=4 Pos=-184 [Shewanella woodyi ATCC 51908]
AAACATGACTCGCTTAACAAAA
>Swoo_2604(fadE2) Score=4.8 Pos=-73 [Shewanella woodyi ATCC 51908]
AATTGTGATATCGATCAATATA
>Swoo_4060(SO3681) Score=4.7 Pos=-140 [Shewanella woodyi ATCC 51908]
ATGTGTGATCAAGATCAACATT
>Swoo_4146(Sputcn32_0777) Score=3.9 Pos=-81 [Shewanella woodyi ATCC 51908]
TTTATTGATCGAGATCAGCTTA
>Swoo_1264(yfiA-2) Score=4.5 Pos=-76 [Shewanella woodyi ATCC 51908]
AAACGTGATCAAGATCACGACT
>Swoo_2882(Spea_1673) Score=4.2 Pos=-310 [Shewanella woodyi ATCC 51908]
AGTTGTTAACTGGATCTCAAAT
>Swoo_3763(SO3987) Score=4.3 Pos=-82 [Shewanella woodyi ATCC 51908]
TTGTGTGACCTGCATCACGCCA
>Swoo_4258(rarD) Score=4.5 Pos=-44 [Shewanella woodyi ATCC 51908]
CATAGTGATCAATATCACATTC
>Swoo_0591(SO4154) Score=4.2 Pos=-9 [Shewanella woodyi ATCC 51908]
ATTTTTGACATGTATCACCTCA
>Swoo_0506(prmA) Score=4.5 Pos=-233 [Shewanella woodyi ATCC 51908]
TTTTTTGAACCACATCACAAAC
>Swoo_2709(SO2637) Score=4.4 Pos=-136 [Shewanella woodyi ATCC 51908]
AATTGTGATCTGTGTGGCAATT
>Swoo_1050(SO3588) Score=3.9 Pos=-206 [Shewanella woodyi ATCC 51908]
TTATGTGATGAATGATTCATTT
>Swoo_4818 Score=4.2 Pos=-148 [Shewanella woodyi ATCC 51908]
TTTGATGATCTAGCTCAAAAAA
>Swoo_3236(etfB) Score=4.5 Pos=-214 [Shewanella woodyi ATCC 51908]
ATTTGTGAATGTACTCATATAT
>Swoo_4751(Spea_3654) Score=4.2 Pos=-98 [Shewanella woodyi ATCC 51908]
TTATGTGAACAACAGCTCAAAA
>Swoo_1424(SO1603) Score=4 Pos=-228 [Shewanella woodyi ATCC 51908]
AAATGAAACATCTATCACACAT
>Swoo_4512(kefA) Score=3.9 Pos=-127 [Shewanella woodyi ATCC 51908]
ATTCATGATCCTCTTCACGCAG
>Swoo_4104(Swoo_4104) Score=4.2 Pos=-268 [Shewanella woodyi ATCC 51908]
TAATCAGACGTGCATCACATTT
>Swoo_3518(SO1247) Score=4.8 Pos=-312 [Shewanella woodyi ATCC 51908]
TTTTGTGAATTGTATCACTTAT
>Swoo_1224(SO1328) Score=4.3 Pos=-111 [Shewanella woodyi ATCC 51908]
ATTTTAGAGATAGCTCACATTT
# TF - NarP: Swoo_0970
>Swoo_4806(SO4520) Score=4.8 Pos=-107 [Shewanella woodyi ATCC 51908]
TAACTCTAAAGTGGTA
>Swoo_4109(napD) Score=5 Pos=-124 [Shewanella woodyi ATCC 51908]
TACCCCTTACTAGGTA
>Swoo_3207(ompW) Score=4.1 Pos=-133 [Shewanella woodyi ATCC 51908]
TATCTATAAGTGGGTA
>Swoo_4517(SO3141) Score=5.1 Pos=-161 [Shewanella woodyi ATCC 51908]
TACCTCTTTAGTAGTA
>Swoo_3303(Shew_2655) Score=5 Pos=-164 [Shewanella woodyi ATCC 51908]
TACCACTTTATAGGTA
>Swoo_3303(Shew_2655) Score=4.8 Pos=-150 [Shewanella woodyi ATCC 51908]
TACCACTTAATTAGTA
>Swoo_0972(nrfA) Score=5 Pos=-100 [Shewanella woodyi ATCC 51908]
TACCTCATAAGGGGTA
>Swoo_2682(napE2) Score=4.4 Pos=-157 [Shewanella woodyi ATCC 51908]
TACCAAGTTAGAGGTA
>Swoo_3124(omcA) Score=5.1 Pos=-209 [Shewanella woodyi ATCC 51908]
TACCCCTAAAGAAATA
>Swoo_0971(narQ) Score=5.2 Pos=-160 [Shewanella woodyi ATCC 51908]
TACCCCTTATGAGGTA
>Swoo_3125(mtrC) Score=5 Pos=-218 [Shewanella woodyi ATCC 51908]
TACCCCTTTATAAATA
# TF - Fnr: Swoo_2417
>Swoo_4794(etfD) Score=4.5 Pos=-162 [Shewanella woodyi ATCC 51908]
TTGCTCAGGATCAA
>Swoo_3207(ompW) Score=4.1 Pos=-154 [Shewanella woodyi ATCC 51908]
GTGAGTTCGATCAA
>Swoo_3207(ompW) Score=5.2 Pos=-104 [Shewanella woodyi ATCC 51908]
TTGATTTGGATCAA
>Swoo_0239(nrfX) Score=4.9 Pos=-88 [Shewanella woodyi ATCC 51908]
TTGATTTGAATCAA
>Swoo_2635(narK) Score=5.4 Pos=-166 [Shewanella woodyi ATCC 51908]
ATGATCTGGATCAA
>Swoo_2635(narK) Score=3.9 Pos=-196 [Shewanella woodyi ATCC 51908]
GTGATCTGCTGCAA
>Swoo_0972(nrfA) Score=4.6 Pos=-127 [Shewanella woodyi ATCC 51908]
TTGATCTACCGCAA
>Swoo_3608(bfr2) Score=5.4 Pos=-85 [Shewanella woodyi ATCC 51908]
TTGATGTAGATCAA
>Swoo_2636(narX) Score=5.1 Pos=-223 [Shewanella woodyi ATCC 51908]
TTGATCCAGATCAT
>Swoo_0971(narQ) Score=4.6 Pos=-131 [Shewanella woodyi ATCC 51908]
TTGCGGTAGATCAA
>Swoo_1565(cydA) Score=4.9 Pos=-334 [Shewanella woodyi ATCC 51908]
TTGATTTGAATCAA
>Swoo_1565(cydA) Score=4.2 Pos=-51 [Shewanella woodyi ATCC 51908]
ATGATGGGGATCTA
>Swoo_0285(acnB) Score=4.3 Pos=-135 [Shewanella woodyi ATCC 51908]
GTGATCTGATTCAA
>Swoo_4819(fdhD) Score=5.1 Pos=-159 [Shewanella woodyi ATCC 51908]
TTGAGCTAGATCAT
>Swoo_2416(uspE) Score=4.9 Pos=-70 [Shewanella woodyi ATCC 51908]
TTGATCTAAAGCAA
>Swoo_4109(napD) Score=4.6 Pos=-151 [Shewanella woodyi ATCC 51908]
TTGATCTTGATCGA
>Swoo_4793(moaA) Score=4.6 Pos=-187 [Shewanella woodyi ATCC 51908]
TTGATCCTGAGCAA
>Swoo_3049(nrdD) Score=4.8 Pos=-122 [Shewanella woodyi ATCC 51908]
ATGATCAGGATCAA
>Swoo_0178(coxB) Score=4.9 Pos=-337 [Shewanella woodyi ATCC 51908]
GTGATCTTGATCAA
>Swoo_2541(pykA) Score=4.7 Pos=-95 [Shewanella woodyi ATCC 51908]
TTGCGCTAGATCAT
>Swoo_0507(frdC2) Score=4.4 Pos=-134 [Shewanella woodyi ATCC 51908]
GTGATGTGGTTCAA
>Swoo_0710(cydD) Score=5.3 Pos=-145 [Shewanella woodyi ATCC 51908]
TTGATCTAGCTCAA
>Swoo_0566(nifS) Score=4.7 Pos=-101 [Shewanella woodyi ATCC 51908]
GTGATCTTGATCAT
>Swoo_2425(ccoN) Score=5.6 Pos=-216 [Shewanella woodyi ATCC 51908]
TTGATCTAGATCAA
>Swoo_2425(ccoN) Score=4.3 Pos=-173 [Shewanella woodyi ATCC 51908]
TTGACATAGCTCAA
>Swoo_2420(ccoI) Score=4.5 Pos=-16 [Shewanella woodyi ATCC 51908]
TTAAACTAGATCAA
>Swoo_4146(Sama_0549) Score=4.4 Pos=-77 [Shewanella woodyi ATCC 51908]
TTGATCGAGATCAG
>Swoo_4818(SO4504) Score=5.2 Pos=-144 [Shewanella woodyi ATCC 51908]
ATGATCTAGCTCAA
>Swoo_2688(Sama_1615) Score=4.6 Pos=-163 [Shewanella woodyi ATCC 51908]
TCGATGTGGATCAA
>Swoo_4155(SO0579) Score=4.8 Pos=-226 [Shewanella woodyi ATCC 51908]
TTGATGTAGGTCAA
>Swoo_3303(Shew_2655) Score=4.5 Pos=-78 [Shewanella woodyi ATCC 51908]
TTGTTCCAGATCAA
>Swoo_1260(hcp) Score=4.7 Pos=-121 [Shewanella woodyi ATCC 51908]
TTGATCTGTCTCAA
# TF - MetJ: Swoo_0621
>Swoo_4088(metH) Score=6.3 Pos=-163 [Shewanella woodyi ATCC 51908]
GGACGTCTATACGTAT
>Swoo_4088(metH) Score=5.8 Pos=-155 [Shewanella woodyi ATCC 51908]
ATACGTATAAACATCC
>Swoo_3732(metR) Score=6.3 Pos=-108 [Shewanella woodyi ATCC 51908]
GGGCGTCTGGACGTCT
>Swoo_3732(metR) Score=6.6 Pos=-100 [Shewanella woodyi ATCC 51908]
GGACGTCTAGATGTAT
>Swoo_3427(metY) Score=5.1 Pos=-95 [Shewanella woodyi ATCC 51908]
AAACATCCAAATGGTT
>Swoo_3427(metY) Score=6.2 Pos=-61 [Shewanella woodyi ATCC 51908]
AGACATCTAGATGGCC
>Swoo_0875(metK) Score=5.9 Pos=-145 [Shewanella woodyi ATCC 51908]
AGCCGTCTAGATGTAA
>Swoo_0875(metK) Score=5.2 Pos=-137 [Shewanella woodyi ATCC 51908]
AGATGTAAATACTTCT
>Swoo_2120(metC) Score=5.4 Pos=-61 [Shewanella woodyi ATCC 51908]
AGCCGTTTAGATGTTA
>Swoo_2120(metC) Score=5.3 Pos=-53 [Shewanella woodyi ATCC 51908]
AGATGTTAAGATGGCT
>Swoo_3205(COG3126) Score=6.2 Pos=-50 [Shewanella woodyi ATCC 51908]
GGACATATAGACATCC
>Swoo_3205(COG3126) Score=6.7 Pos=-42 [Shewanella woodyi ATCC 51908]
AGACATCCAGAAGTCT
>Swoo_3205(COG3126) Score=5.6 Pos=-34 [Shewanella woodyi ATCC 51908]
AGAAGTCTTGATGTAT
>Swoo_0624(metF) Score=6.3 Pos=-92 [Shewanella woodyi ATCC 51908]
GGATGTATAGACGTCC
>Swoo_0624(metF) Score=7.1 Pos=-84 [Shewanella woodyi ATCC 51908]
AGACGTCCAAACGTCT
>Swoo_3871(metT) Score=5.6 Pos=-191 [Shewanella woodyi ATCC 51908]
AGAAGTAAAAACATCT
>Swoo_3871(metT) Score=7.1 Pos=-183 [Shewanella woodyi ATCC 51908]
AAACATCTAGACGTCT
>Swoo_0621(metJ) Score=6 Pos=-168 [Shewanella woodyi ATCC 51908]
GGACGTCTAAATGTAC
>Swoo_0621(metJ) Score=7 Pos=-124 [Shewanella woodyi ATCC 51908]
AGACGTTTAGACGTCC
>Swoo_0622(metB) Score=7.2 Pos=-72 [Shewanella woodyi ATCC 51908]
AGACGTCCAGACATCT
>Swoo_0621(metJ) Score=6.1 Pos=-116 [Shewanella woodyi ATCC 51908]
AGACGTCCGAACATAT
>Swoo_0622(metB) Score=7 Pos=-124 [Shewanella woodyi ATCC 51908]
GGACGTCTAAACGTCT
>Swoo_0621(metJ) Score=7 Pos=-176 [Shewanella woodyi ATCC 51908]
AGATGTCTGGACGTCT
>Swoo_2276(msrA) Score=5.5 Pos=-65 [Shewanella woodyi ATCC 51908]
GGACGGCTAAACGGCC
>Swoo_2276(msrA) Score=6.2 Pos=-73 [Shewanella woodyi ATCC 51908]
AGACATCCGGACGGCT
# TF - SO2282: Swoo_1966
>Swoo_1966(SO2282) Score=7.7 Pos=-84 [Shewanella woodyi ATCC 51908]
AATTGTACACATACAATA
>Swoo_1966(SO2282) Score=7.7 Pos=-7 [Shewanella woodyi ATCC 51908]
TATTGTTATGGTACAATT
>Swoo_1967(PF01810) Score=7.7 Pos=-55 [Shewanella woodyi ATCC 51908]
TATTGTATGTGTACAATT
>Swoo_1967(PF01810) Score=7.7 Pos=-133 [Shewanella woodyi ATCC 51908]
AATTGTACCATAACAATA
# TF - PdxW: Swoo_3373
>Swoo_3372(PF00583) Score=12.7 Pos=-89 [Shewanella woodyi ATCC 51908]
TCTGGTATA-(14)-TCTGGGTCT-(6)-TATACCAGA
# TF - TsrR: Swoo_4446, Swoo_4467
>Swoo_4456(tsrA) Score=5.8 Pos=-258 [Shewanella woodyi ATCC 51908]
CAGTTTTTAGATCTAAAAAATC
>Swoo_4456(tsrA) Score=4.9 Pos=-134 [Shewanella woodyi ATCC 51908]
TGTTTTTTATATGGAAAATACT
>Swoo_4477(tsrA) Score=5.7 Pos=-265 [Shewanella woodyi ATCC 51908]
AACCTTTTAGATATCAAAAAAC
>Swoo_4478(ccmF-2) Score=5.7 Pos=-320 [Shewanella woodyi ATCC 51908]
GTTTTTTGATATCTAAAAGGTT