# TF - TauR2: ROS217_02035
>ROS217_02030(COG-MhpC) Score=8.4 Pos=-233 [Roseovarius sp. 217]
CTGTCCCTTC------------CTGTCTCTCG
>ROS217_02040 Score=9.2 Pos=-139 [Roseovarius sp. 217]
CTGTCCCCTT------------CTGTCCCTTC
# TF - NsrR: ROS217_14291, ROS217_02155
>ROS217_02150(PF01152) Score=6.4 Pos=-33 [Roseovarius sp. 217]
TAGGTATTTACAATACCGA
>ROS217_14296(PF01812) Score=6.4 Pos=-94 [Roseovarius sp. 217]
TCGGTATTTACAATACCTA
>ROS217_14291(nsrR) Score=6.4 Pos=-41 [Roseovarius sp. 217]
TAGGTATTGTAAATACCGA
>ROS217_02155(nsrR) Score=6.4 Pos=-41 [Roseovarius sp. 217]
TCGGTATTGTAAATACCTA
# TF - NrdR: ROS217_15515
>ROS217_22582(nrdJ) Score=5.4 Pos=-185 [Roseovarius sp. 217]
CCACAACATATAGTGG
# TF - Zur: ROS217_23042
>ROS217_23037(znuA) Score=5.3 Pos=-32 [Roseovarius sp. 217]
TGAATGTTATGATATCACATATG
>ROS217_23042(zur) Score=5.5 Pos=-98 [Roseovarius sp. 217]
CATATGTGATATCATAACATTCA
# TF - NnrR: ROS217_10027
>ROS217_10032(DUF1858) Score=4.6 Pos=-64 [Roseovarius sp. 217]
GTTTGTTGCAGCGCAATG
>ROS217_10037(norC) Score=4.6 Pos=-74 [Roseovarius sp. 217]
CATTGCGCTGCAACAAAC
>ROS217_10027(nnrR) Score=4.9 Pos=-46 [Roseovarius sp. 217]
TTTTGCTCTGGCGCAAAC
>ROS217_10022(COG3794) Score=4.9 Pos=-81 [Roseovarius sp. 217]
GTTTGCGCCAGAGCAAAA
# TF - HutC: ROS217_11791, ROS217_15955
>ROS217_15945(hutG) Score=4.1 Pos=-52 [Roseovarius sp. 217]
AATATGCTTAATCATATT
>ROS217_15950(hutF) Score=4.1 Pos=-42 [Roseovarius sp. 217]
AATATGATTAAGCATATT
>ROS217_11786(hutI) Score=6.2 Pos=-86 [Roseovarius sp. 217]
AATATGTATAGACATAAT
>ROS217_11791(hutC) Score=6.2 Pos=-187 [Roseovarius sp. 217]
ATTATGTCTATACATATT
# TF - IscR: ROS217_20542
>ROS217_22877(araX) Score=4.1 Pos=-165 [Roseovarius sp. 217]
CCTGATGTAATTTGTCAAC
>ROS217_17442(hmuR) Score=4.4 Pos=-198 [Roseovarius sp. 217]
CTTGACTCTTTTACTCATA
>ROS217_22882(fhuA) Score=4.7 Pos=-30 [Roseovarius sp. 217]
CCTGAGTTAAAGAGTCGGA
>ROS217_23865(hemP) Score=4.2 Pos=-152 [Roseovarius sp. 217]
TCTGATCAAAAGAATCGGA
>ROS217_23865(hemP) Score=4.7 Pos=-124 [Roseovarius sp. 217]
CCTTATTAATTAAGTCAGA
>ROS217_10107(irpA) Score=4.6 Pos=-147 [Roseovarius sp. 217]
GCCTACTAAATCAGTCAAC
>ROS217_20542(iscR) Score=3.5 Pos=-120 [Roseovarius sp. 217]
CTTGACGACTTCGCTCGGG
>ROS217_20592(fbpC) Score=4.1 Pos=-36 [Roseovarius sp. 217]
CCCGATAGATTTGATCGGA
>ROS217_23057(fbpA) Score=3.8 Pos=-38 [Roseovarius sp. 217]
CCCCATCAAATCACTCGGA
>ROS217_23057(fbpA) Score=4.8 Pos=-70 [Roseovarius sp. 217]
ATTGACTCTTTTAGTCAGA
# TF - Irr: ROS217_15500
>ROS217_20542(iscR) Score=6 Pos=-100 [Roseovarius sp. 217]
ACCTTAGAACTGTTCTAAATT
>ROS217_10487(fssA) Score=5.8 Pos=-76 [Roseovarius sp. 217]
ATCTTAGAATGGTTCTAAACC
>ROS217_11126(mbfA) Score=6.3 Pos=-30 [Roseovarius sp. 217]
AGTTTAGAATTATTCTAAAAG
>ROS217_11501(ccpA) Score=5.5 Pos=-75 [Roseovarius sp. 217]
GATTTAGAATGGTTCCAAACG
# TF - NtrC: ROS217_20457
>ROS217_04115(glnK) Score=4.8 Pos=-133 [Roseovarius sp. 217]
TGCACATATTTTGAGCA
>ROS217_20467(nifR3) Score=5 Pos=-113 [Roseovarius sp. 217]
CGCCTAAAAATTAGGCG
>ROS217_05379(ureD) Score=3.9 Pos=-120 [Roseovarius sp. 217]
TGCGCTAAAAATAGGCA
>ROS217_20467(nifR3) Score=4.8 Pos=-21 [Roseovarius sp. 217]
TGCACAAGGATTAGGCA
>ROS217_04115(glnK) Score=4.7 Pos=-162 [Roseovarius sp. 217]
TGCATAAATTTTAGGCT
>ROS217_18110(glnB) Score=4.8 Pos=-128 [Roseovarius sp. 217]
CGCCCATTATTTAGGCA
>ROS217_14776(nasT) Score=4.5 Pos=-111 [Roseovarius sp. 217]
CGCCCATTTTATGGGCA
# TF - Mur: ROS217_18337
>ROS217_05129(sitA) Score=5.1 Pos=-28 [Roseovarius sp. 217]
GTTGCGAATAATTCTCATA
# TF - ModE2: ROS217_12631
>ROS217_12636 Score=5.6 Pos=-41 [Roseovarius sp. 217]
GATATGTTTCAGTGAACATATC
>ROS217_12636 Score=5.5 Pos=-88 [Roseovarius sp. 217]
GATGTATCTGAGTGAACATAAC
# TF - LexA: ROS217_21392
>ROS217_05784(dnaE2) Score=0.6 Pos=-46 [Roseovarius sp. 217]
GAACAAAACTGGAAC
>ROS217_21917(uvrD) Score=0.8 Pos=-56 [Roseovarius sp. 217]
GAACAATCCCCGAAC
>ROS217_11166(imuB) Score=0.8 Pos=-24 [Roseovarius sp. 217]
GAACAAATAGAGAAC
>ROS217_21392(lexA) Score=-0.5 Pos=-58 [Roseovarius sp. 217]
ACACAAAACGGGAAC
>ROS217_20887(recA) Score=1 Pos=-66 [Roseovarius sp. 217]
GAACAAGAGGCGAAC
>ROS217_22507(ruvC) Score=5.2 Pos=-51 [Roseovarius sp. 217]
GTTCCCGTTTCGTGC
>ROS217_19127(uvrA) Score=4.9 Pos=-82 [Roseovarius sp. 217]
GTTCGCGCTCTGTTC
>ROS217_19572(PF04055) Score=5.1 Pos=6 [Roseovarius sp. 217]
GTTCTCTATATGTTC
>ROS217_20887(recA) Score=4.9 Pos=-94 [Roseovarius sp. 217]
GTTCTCTCTTTGTCC
>ROS217_03665(PF06319) Score=5 Pos=-26 [Roseovarius sp. 217]
GTTCGTGGTTTGTTC
# TF - LiuR: ROS217_11336
>ROS217_11336(liuR) Score=4.6 Pos=-117 [Roseovarius sp. 217]
TCTTACGTCAACTTCAAA
# TF - RutR: ROS217_12316
>ROS217_12316(rutR) Score=5.8 Pos=-58 [Roseovarius sp. 217]
TTTTTACCATTTGGTAAACT
>ROS217_06720(pydX) Score=6.2 Pos=-69 [Roseovarius sp. 217]
ATTTTACCAATTGATAAAAT
>ROS217_10977(pytM) Score=6.2 Pos=-44 [Roseovarius sp. 217]
ATTTTACCAATTGGTAAAAC
>ROS217_12311(pydC) Score=5.7 Pos=-33 [Roseovarius sp. 217]
AGTTTACCAAATGGTAAAAA
# TF - PhnF: ROS217_04230
>ROS217_04235(phnG) Score=5.5 Pos=-49 [Roseovarius sp. 217]
TTGTATAGTGATATCGACAA
>ROS217_04230(phnF) Score=5.4 Pos=-85 [Roseovarius sp. 217]
TTGTCGATATCACTATACAA
# TF - EutR: ROS217_08279
>ROS217_08279(eutR) Score=4.8 Pos=11 [Roseovarius sp. 217]
TGTGTCAATATATTTCCAGC
>ROS217_08279(eutR) Score=5.6 Pos=-19 [Roseovarius sp. 217]
TTTGTAAAAATGTTTCCACA
>ROS217_08284(eutA) Score=5.6 Pos=-36 [Roseovarius sp. 217]
TGTGGAAACATTTTTACAAA
>ROS217_08284(eutA) Score=4.8 Pos=-66 [Roseovarius sp. 217]
GCTGGAAATATATTGACACA
# RNA - mini-ykkC
>ROS217_23162(COG4125) Score=31.1 Pos=-65 [Roseovarius sp. 217]
AGCGAGGACGACCTCCACATCTGGACAACAGCCCGGGACGACCCGGCA
# RNA - Cobalamin
>ROS217_07994(cbtB) Score=111.3 Pos=-256 [Roseovarius sp. 217]
GCATACGAGAGTGGCAAGGTTCCTCGTTTCGGTGCAAAGCGCCGCGAGGATAAATGGGAATGACGTGCCGGCGGACCCAATCAGGGCGTCCATGCGTCAGCCGCCCCCGCGACTGTAAGCGGCGAGCCCCTGCCAGATGCCACTGAGGTGTAAAACCCTTGGGAAGGCGGCAGACAGGCGACGACCCGCGAGCCAGGAGACCAGCCCTGCGTTTGTTAATCCCGCC
>ROS217_16870(ISM_13370) Score=107.2 Pos=-306 [Roseovarius sp. 217]
TAGGCTGATCCTGTCATGGTGCCATGCCGACAGCAGTCCACTGCTCTCGGGATGGAGAATTGGGAAGCCGGTGCGATTCCGGCGCTGCCCCCGCAACGGTAAGGGAGGGCGTTTCGGCGATATGCCACTGGGCGACAATGCTCGGGAAGGTGCCGCGACGCGAGGGTCATCCGGCCCGCCATCCAAGCCCGGAAACCAGCCTTGGCGTGACGTCGAATCGC
# RNA - S15
>ROS217_09385(rpsO) Score=20.4 Pos=-58 [Roseovarius sp. 217]
GACCTTGCTGGACGACATCCCGGCTTGTGCCCGACACACTTTATGCAAGGAGACCCCGATGTCGATTACCGCAGAAGAAAAAGACCGCGTCATCAAGGAATTCGGAACCAAAGAAGG
# RNA - serC
>ROS217_08825(serC) Score=68.3 Pos=-139 [Roseovarius sp. 217]
TCAGTGGGACACCCCTCCCCAACGAGGGGCGCTTATCTGAGAGGGTAGCTAAA
# RNA - SAM_alpha
>ROS217_17025(metY) Score=58.7 Pos=-134 [Roseovarius sp. 217]
AATGCGCGACTGTGGCGATTTGTTACCGGATTGCGGGCCACGTTAAACAAACCGCTAAAAGGTCAGGATGAAAGGCCC
# RNA - TPP
>ROS217_02430(thiC) Score=56.6 Pos=-236 [Roseovarius sp. 217]
AAGAGGGACGCAGGGGAGTCCCGACCAAGGGACTGAGAGGCGGCTGAGAGCGATTGCTCAGTGTCGCGACCCTTTGAACCTGACCCAGTTGATACTGGCGTAGGAAGCTAGGACACGTGGTTT
>ROS217_09305(thiD) Score=80.7 Pos=-148 [Roseovarius sp. 217]
GCAACATCCGTTGGGGTGCCCGTTTTCGGGCTGAGAGACATTACGTCAACCCATCGAACCTGATCCGGTTGATACCGGCGTAGGGAACGGACATCAGCACGCA
>ROS217_22402(thiZ) Score=61.9 Pos=-150 [Roseovarius sp. 217]
GATATCCGTTGGGGTGCCCGCTTGGGGCTGAGAGGTGAAGAGCCAACCCATCGAACCTGATCCGGCTTGCACCGGCGGAGGGAACGGAGACCGCGCAGCCTT
# RNA - PreQ1
>ROS217_16351(queC) Score=25.8 Pos=-45 [Roseovarius sp. 217]
GTCGAGCGGTCGCAGCCTACCCGCTTTAAAAAACAAGGATGAAAG
# RNA - Glycine
>ROS217_16241(gcvT) Score=43.7 Pos=-268 [Roseovarius sp. 217]
AGATCGGATAGGGAGAACTGGCACATGCCAGTGCCGAAGGAGCAACCGCCCCGGAAACTCTCAGGCGCAAGGACCTGCCCGATC
>ROS217_16241(gcvT) Score=41.7 Pos=-185 [Roseovarius sp. 217]
CACGGAACTCTGGAGAGACCCCGATCTTGTGCGGGGCGCCGACGGGATAGCGATCTCAGGCGAAAGGACAGAGGGGGCATCGT
# RNA - SAM-SAH
>ROS217_17232(metK) Score=57 Pos=-52 [Roseovarius sp. 217]
ATCCCCCACAACGGCTTCCTGGCGTGGCGGTGACATTCAATGGAGCATC
# TF - HrcA: ROS217_09747
>ROS217_12501(groS) Score=7 Pos=-81 [Roseovarius sp. 217]
TTAGCACTCGAACCCCATGAGTGCTAA
# TF - MntR: ROS217_03050
>ROS217_03050(mntR) Score=6.3 Pos=-77 [Roseovarius sp. 217]
AAAGTTAGACATGGCTAATTTA
# TF - CueR: ROS217_02505, ROS217_03400, ROS217_02320, ROS217_07754
>ROS217_02505(cueR) Score=5.2 Pos=-49 [Roseovarius sp. 217]
ACCTTCCATCTACTGGAAGGA
>ROS217_07749(copA) Score=4.3 Pos=-192 [Roseovarius sp. 217]
ACCTTACAGTGACTGGAATCC
>ROS217_03395(copA) Score=5.1 Pos=-55 [Roseovarius sp. 217]
ACCTTCCAGTTGGTGGAAGCC
>ROS217_03390(copZ) Score=5.1 Pos=-103 [Roseovarius sp. 217]
GGCTTCCACCAACTGGAAGGT
>ROS217_02315(copA) Score=4.8 Pos=-61 [Roseovarius sp. 217]
ACCTTCCAGTTACAGGAACCT
# TF - CadR-PbrR: ROS217_13926, ROS217_02950, ROS217_02300
>ROS217_02950(cadR) Score=5.7 Pos=-135 [Roseovarius sp. 217]
ATCCTCTAGCTACTGTAGGTT
>ROS217_03080(cadA) Score=5.3 Pos=-271 [Roseovarius sp. 217]
AAGCTCTAGTTACTGTAGGGG
>ROS217_13921(czcD) Score=5.8 Pos=-128 [Roseovarius sp. 217]
AAGCTCTAGTCACTAGAGAGA
>ROS217_02920(PF03734) Score=5.3 Pos=-111 [Roseovarius sp. 217]
AAGCTCTAGTTGGTAGAGGTT
>ROS217_02925(PF03734) Score=5.1 Pos=-60 [Roseovarius sp. 217]
AAGCTCTAGTGGGTGGAGGTC
# TF - SPO0590: ROS217_11196
>ROS217_11206(dctP) Score=6.6 Pos=-265 [Roseovarius sp. 217]
ATATGTAAGCGCTTACATTT
>ROS217_11196(SPO0590) Score=6.6 Pos=-96 [Roseovarius sp. 217]
AAATGTAAGCGCTTACATAT
# TF - CceR (GapR): ROS217_09370
>ROS217_12046(pykA) Score=5.4 Pos=-51 [Roseovarius sp. 217]
CGATGTTAGCGTTAACATTG
>ROS217_04095(pckA) Score=4.8 Pos=-197 [Roseovarius sp. 217]
GCGCGTTGTCGCTAACATAC
>ROS217_04095(pckA) Score=5.1 Pos=-177 [Roseovarius sp. 217]
GTCTGGTTGCGCTAACTTGC
>ROS217_04095(pckA) Score=4.9 Pos=-157 [Roseovarius sp. 217]
GCTTGGTTGCGCTAACTGCA
>ROS217_15745(pckA) Score=4.8 Pos=-77 [Roseovarius sp. 217]
AAGTGATTGCGCTAACTTGG
>ROS217_23117(gapA) Score=4.7 Pos=-150 [Roseovarius sp. 217]
TTGCGTTAGCGCAATCACCG
>ROS217_23117(gapA) Score=4.9 Pos=-109 [Roseovarius sp. 217]
CTAGGTTAACGCTAACATCC
>ROS217_09370(cceR) Score=4.6 Pos=-46 [Roseovarius sp. 217]
GGGCGTTCGCGGTAACAATG
>ROS217_17772(fba) Score=4.7 Pos=-85 [Roseovarius sp. 217]
TTCTGTTAGCGCCACCACGA
>ROS217_23127(gapB) Score=5.7 Pos=-35 [Roseovarius sp. 217]
AATTGTTAGCGCTAACATAT
>ROS217_14311(atpH) Score=4.6 Pos=-214 [Roseovarius sp. 217]
CCATGATAGCGTTAACGCTT
# TF - MetR: ROS217_15585
>ROS217_15585(metR) Score=4.8 Pos=-48 [Roseovarius sp. 217]
GTGAGACAACTTCAT
>ROS217_15580(metF) Score=4.8 Pos=-74 [Roseovarius sp. 217]
ATGAAGTTGTCTCAC
>ROS217_19582(bhmT) Score=4.2 Pos=-73 [Roseovarius sp. 217]
ATGAAATTTATGCAT
# TF - Pden_3389: ROS217_09195
>ROS217_09185(sgaA) Score=4.8 Pos=-100 [Roseovarius sp. 217]
ATATTGAATTCAGAAT
>ROS217_09185(sgaA) Score=3.8 Pos=-93 [Roseovarius sp. 217]
ATTCAGAATTCAATTC
>ROS217_09185(sgaA) Score=3.9 Pos=-88 [Roseovarius sp. 217]
GAATTCAATTCAACAA
>ROS217_09190(dld2) Score=3.9 Pos=-71 [Roseovarius sp. 217]
TTGTTGAATTGAATTC
>ROS217_09190(dld2) Score=3.8 Pos=-66 [Roseovarius sp. 217]
GAATTGAATTCTGAAT
>ROS217_09190(dld2) Score=4.8 Pos=-59 [Roseovarius sp. 217]
ATTCTGAATTCAATAT
# TF - SPOA0379: ROS217_07305
>ROS217_07300(COG4948) Score=13.3 Pos=-87 [Roseovarius sp. 217]
AAATGGACTG-(13)-GAGTGGAGCT-(5)-CGAACCGCTT
>ROS217_07310(dadA) Score=11.8 Pos=-179 [Roseovarius sp. 217]
AATTGGTCTG-(12)-AATTGGATAT-(6)-AAGTCCAATG
# TF - TauR: ROS217_11941
>ROS217_11286 Score=9.6 Pos=-134 [Roseovarius sp. 217]
CTGGACCTAT-------------CTGGCCCTAA
>ROS217_11936(xsc) Score=9.1 Pos=-114 [Roseovarius sp. 217]
CTGGTATTAT-------------CTGGCCCTAG
# TF - SPOA0375: ROS217_02035
>ROS217_02040 Score=9.2 Pos=-139 [Roseovarius sp. 217]
CTGTCCCCTT------------CTGTCCCTTC
>ROS217_02030(COG596 (MhpC)) Score=8.4 Pos=-233 [Roseovarius sp. 217]
CTGTCCCTTC------------CTGTCTCTCG
# TF - FnrN: ROS217_12216
>ROS217_04445(ctaC) Score=5.2 Pos=-219 [Roseovarius sp. 217]
AATTTGATTTAAATCAAAAA
>ROS217_21737(hemA) Score=5.2 Pos=-168 [Roseovarius sp. 217]
GACTTGACCCAAGTCAAGGA
>ROS217_12216(fnrN) Score=5.3 Pos=-53 [Roseovarius sp. 217]
GCTTTGATTTAGATCAACCG
>ROS217_15111(ctaD) Score=5.4 Pos=-128 [Roseovarius sp. 217]
TCTTTGATCTGCATCAATTT
>ROS217_12221(uspA) Score=5.4 Pos=-111 [Roseovarius sp. 217]
TCCTTGATCTGTGTCAAAAC
>ROS217_12221(uspA) Score=5.4 Pos=-79 [Roseovarius sp. 217]
CGTTTGATCCGCGTCAAGGC
>ROS217_12211(hemN) Score=5.3 Pos=-51 [Roseovarius sp. 217]
CGGTTGATCTAAATCAAAGC
>ROS217_20807(ompW) Score=5.2 Pos=-75 [Roseovarius sp. 217]
AACTTGACCCAAATCAATGT
>ROS217_12226(ccoN) Score=5.4 Pos=-143 [Roseovarius sp. 217]
GCCTTGACGCGGATCAAACG
>ROS217_12226(ccoN) Score=5.4 Pos=-111 [Roseovarius sp. 217]
GTTTTGACACAGATCAAGGA
>ROS217_12261(ccoG) Score=5.5 Pos=-73 [Roseovarius sp. 217]
AATTTGATGCAGGTCAAAGC
# TF - PpsR: ROS217_22197
>ROS217_22367(crtI) Score=5.3 Pos=-34 [Roseovarius sp. 217]
TGTCAATTAAACTAGACA
>ROS217_22202(ppaA) Score=5.3 Pos=-218 [Roseovarius sp. 217]
TGTCAGGATAATTTGACA
>ROS217_22332(bchC) Score=4.6 Pos=-187 [Roseovarius sp. 217]
TGTCAAGTCAGCCTGACG
>ROS217_22332(bchC) Score=5.1 Pos=-153 [Roseovarius sp. 217]
TGTAAAGAAAGATTGACA
>ROS217_22332(bchC) Score=4.6 Pos=-127 [Roseovarius sp. 217]
TGTCCGGTTACACTTACA
>ROS217_22192(bchG) Score=5.2 Pos=-20 [Roseovarius sp. 217]
TGTATAGTTTAATTGACA
>ROS217_22192(bchG) Score=4.1 Pos=5 [Roseovarius sp. 217]
TGTCACAGAGTCCTTACA
>ROS217_22347(crtD) Score=4.5 Pos=-72 [Roseovarius sp. 217]
TGTATCACAAATCTGACA
>ROS217_22347(crtD) Score=5 Pos=-47 [Roseovarius sp. 217]
TGTAAATCATACTGGACA
>ROS217_22342(crtE) Score=5 Pos=-63 [Roseovarius sp. 217]
TGTCCAGTATGATTTACA
>ROS217_22342(crtE) Score=4.5 Pos=-38 [Roseovarius sp. 217]
TGTCAGATTTGTGATACA
>ROS217_16035(bchE) Score=5.7 Pos=-58 [Roseovarius sp. 217]
TGTCAAGTTAAGTTGACA
>ROS217_22367(crtI) Score=5.2 Pos=-89 [Roseovarius sp. 217]
TGTCAGATAAGTCTGACA
>ROS217_22207(bchF) Score=5.5 Pos=-76 [Roseovarius sp. 217]
TGTAAATTATAATTGACA
>ROS217_22372(crtA) Score=4.5 Pos=-37 [Roseovarius sp. 217]
TGTCAACATAAGATGACC
>ROS217_22372(crtA) Score=5.3 Pos=-12 [Roseovarius sp. 217]
TGTCTAGTTTAATTGACA
>ROS217_22207(bchF) Score=5.3 Pos=-247 [Roseovarius sp. 217]
TGTCAAATTATCCTGACA