# TF - NrdR: RB2654_05552
>RB2654_04361(nrdJ) Score=5.4 Pos=-209 [Rhodobacterales bacterium HTCC2654]
CCACAACATATAGTGG
# TF - Zur: RB2654_20873
>RB2654_20868(znuA) Score=5.2 Pos=-59 [Rhodobacterales bacterium HTCC2654]
GATGCGTTATGATATTACAGATA
>RB2654_20873(zur) Score=5.5 Pos=-35 [Rhodobacterales bacterium HTCC2654]
TATCTGTAATATCATAACGCATC
# TF - LldR: RB2654_23238
>RB2654_23243(dld) Score=5.1 Pos=-112 [Rhodobacterales bacterium HTCC2654]
GTGGTCAATAATATTTACCAC
>RB2654_23238(lldR) Score=5.3 Pos=-170 [Rhodobacterales bacterium HTCC2654]
GTGGTAAATATTATTGACCAC
# TF - NnrR: RB2654_12769
>RB2654_12849(nosR) Score=4.8 Pos=-73 [Rhodobacterales bacterium HTCC2654]
GTTTGCGAAATCACAAAC
>RB2654_12814(nirK) Score=4.3 Pos=-168 [Rhodobacterales bacterium HTCC2654]
CTTTGCGCTTGATCAATA
>RB2654_12764(COG3794) Score=4 Pos=-84 [Rhodobacterales bacterium HTCC2654]
GTTTGTCGAAGTGCAATG
>RB2654_12779(norC) Score=4.3 Pos=-146 [Rhodobacterales bacterium HTCC2654]
CTTTGCGTTTCCACAACA
>RB2654_12769(nnrR) Score=4 Pos=-31 [Rhodobacterales bacterium HTCC2654]
CATTGCACTTCGACAAAC
>RB2654_12774(DUF1858) Score=4.3 Pos=-63 [Rhodobacterales bacterium HTCC2654]
TGTTGTGGAAACGCAAAG
# TF - IscR: RB2654_04009
>RB2654_09499(fecC) Score=4.7 Pos=-87 [Rhodobacterales bacterium HTCC2654]
GTTGAGTGTTTCAGTCGGA
>RB2654_09499(fecC) Score=4.9 Pos=-54 [Rhodobacterales bacterium HTCC2654]
ATTGACTAAATCAGTCGGG
>RB2654_15781(hmuR) Score=4.6 Pos=-112 [Rhodobacterales bacterium HTCC2654]
GTTGACTAAATTACTAAGC
>RB2654_13154(irpA) Score=3.9 Pos=-25 [Rhodobacterales bacterium HTCC2654]
CCCGATCACTTTACTCGGG
>RB2654_08847 Score=5.2 Pos=-91 [Rhodobacterales bacterium HTCC2654]
TCCGACTGAATTTGTCAGA
>RB2654_09494(fecB) Score=4.9 Pos=-67 [Rhodobacterales bacterium HTCC2654]
CCCGACTGATTTAGTCAAT
>RB2654_09494(fecB) Score=4.7 Pos=-34 [Rhodobacterales bacterium HTCC2654]
TCCGACTGAAACACTCAAC
>RB2654_04329(fbpA) Score=5.2 Pos=-52 [Rhodobacterales bacterium HTCC2654]
CCTGACGAATTTAGTCAGA
# TF - Irr: RB2654_18263
>RB2654_13154(irpA) Score=5.4 Pos=-46 [Rhodobacterales bacterium HTCC2654]
TGATTGGAACCATTCCAAATT
>RB2654_18613(fssA) Score=4.8 Pos=-52 [Rhodobacterales bacterium HTCC2654]
GACTTGGAACGATTCCAAGCT
>RB2654_16991(mbfA) Score=6 Pos=-30 [Rhodobacterales bacterium HTCC2654]
AGTTTGGAATCGTTCCAAACA
# TF - NtrC: RB2654_03219
>RB2654_10683(glnK) Score=4.9 Pos=-136 [Rhodobacterales bacterium HTCC2654]
TGACTAAAATTTGTGCA
>RB2654_10683(glnK) Score=3.9 Pos=-117 [Rhodobacterales bacterium HTCC2654]
TGCCCACAATGCGGGCA
>RB2654_03209(nifR3) Score=4.6 Pos=-107 [Rhodobacterales bacterium HTCC2654]
TGCACAAATAACAGGCA
>RB2654_03209(nifR3) Score=4.5 Pos=-17 [Rhodobacterales bacterium HTCC2654]
CGCACAAGGATTAAGCA
>RB2654_02324(glnB) Score=5 Pos=-127 [Rhodobacterales bacterium HTCC2654]
TGCATAAATATTGTGCG
>RB2654_12499(nasT) Score=4.7 Pos=-91 [Rhodobacterales bacterium HTCC2654]
TGCCTAGAAATTAGGCA
>RB2654_15836(urtA) Score=4.5 Pos=-248 [Rhodobacterales bacterium HTCC2654]
CGCACAATTATTAGGCT
>RB2654_15836(urtA) Score=4 Pos=-178 [Rhodobacterales bacterium HTCC2654]
TGCTCAAAAGGTATGCA
>RB2654_12489(nrtA) Score=4.7 Pos=-260 [Rhodobacterales bacterium HTCC2654]
CGCACAAGAATTAAGCA
# TF - Mur: RB2654_19538
>RB2654_19543(sitA) Score=5.4 Pos=-117 [Rhodobacterales bacterium HTCC2654]
GTTGCAATTCATTCGCAAC
>RB2654_19538(mur) Score=5.7 Pos=-79 [Rhodobacterales bacterium HTCC2654]
AGTGCAAATCATTTGCAAC
>RB2654_19538(mur) Score=5.4 Pos=-127 [Rhodobacterales bacterium HTCC2654]
GTTGCGAATGAATTGCAAC
>RB2654_19543(sitA) Score=5.7 Pos=-165 [Rhodobacterales bacterium HTCC2654]
GTTGCAAATGATTTGCACT
# TF - ModE2: RB2654_14145
>RB2654_14140 Score=5.6 Pos=-11 [Rhodobacterales bacterium HTCC2654]
GATATGTTTCAGTGAACATATC
# TF - LexA: RB2654_04726
>RB2654_12554(dnaE2) Score=0.3 Pos=-28 [Rhodobacterales bacterium HTCC2654]
GAACAAAACGTGAAT
>RB2654_21543(uvrD) Score=1.3 Pos=-111 [Rhodobacterales bacterium HTCC2654]
GAACATACCCTGAAC
>RB2654_16956(imuB) Score=1.7 Pos=-37 [Rhodobacterales bacterium HTCC2654]
GAACATTAAGTGAAC
>RB2654_04726(lexA) Score=-0.4 Pos=-83 [Rhodobacterales bacterium HTCC2654]
ACACGAAACGAGAAC
>RB2654_03904(recA) Score=1 Pos=-56 [Rhodobacterales bacterium HTCC2654]
GAACAAGAGGCGAAC
>RB2654_05712(ruvC) Score=5.2 Pos=-62 [Rhodobacterales bacterium HTCC2654]
GTTCGCGTTTCGTGC
>RB2654_04776(uvrA) Score=4.9 Pos=-81 [Rhodobacterales bacterium HTCC2654]
GTTCACACTTCGTTC
>RB2654_02045(PF04055) Score=4.5 Pos=-20 [Rhodobacterales bacterium HTCC2654]
GTTCTACTAATGTTC
>RB2654_05485(PF06319) Score=4.8 Pos=-26 [Rhodobacterales bacterium HTCC2654]
GTTCACGAATTGTTC
# TF - LiuR: RB2654_20563
>RB2654_20563(liuR) Score=5.7 Pos=-69 [Rhodobacterales bacterium HTCC2654]
GTTGACGTAAACGTAATC
# TF - RutR: RB2654_07801
>RB2654_20823(cdd) Score=5 Pos=-29 [Rhodobacterales bacterium HTCC2654]
ACTGGACCATACGGTCAAAG
>RB2654_20923(pntD) Score=4.8 Pos=-186 [Rhodobacterales bacterium HTCC2654]
TTTTGAACGTCGGGTCAAAT
>RB2654_14990(pydX) Score=6.1 Pos=-337 [Rhodobacterales bacterium HTCC2654]
TTTTTACCAATTGATAAAAA
>RB2654_07801(rutR) Score=4.9 Pos=-61 [Rhodobacterales bacterium HTCC2654]
CGTTGATCATCTGGTCAAAT
>RB2654_10383(deoC) Score=5.4 Pos=-26 [Rhodobacterales bacterium HTCC2654]
ATTTGACCAAAAGGAAAAAT
>RB2654_14955(pydC) Score=5.8 Pos=-233 [Rhodobacterales bacterium HTCC2654]
ATTTAACCGAATGGTAAAAA
# TF - PhnF: RB2654_09759
>RB2654_09759(phnF) Score=5 Pos=-75 [Rhodobacterales bacterium HTCC2654]
TTGTCTACGCTACTATACAA
>RB2654_09754(phnG) Score=5.1 Pos=-37 [Rhodobacterales bacterium HTCC2654]
TTGTATAGTAGCGTAGACAA
# TF - PaaR: RB2654_06364
>RB2654_06379(paaF) Score=6.1 Pos=-54 [Rhodobacterales bacterium HTCC2654]
ATTGACCGACCAGTCGGTTTAA
>RB2654_06384(paaZ) Score=6.1 Pos=-66 [Rhodobacterales bacterium HTCC2654]
TTAAACCGACTGGTCGGTCAAT
# TF - RhaR: RB2654_09464
>RB2654_09464(rhaR) Score=4.8 Pos=-114 [Rhodobacterales bacterium HTCC2654]
TCAACCA---CCGATCA
>RB2654_09464(rhaR) Score=5.4 Pos=-63 [Rhodobacterales bacterium HTCC2654]
ATGAAAA---TTGATTG
>RB2654_09469(rhaEW) Score=6.9 Pos=-60 [Rhodobacterales bacterium HTCC2654]
ATGATCG---ATGATCG
>RB2654_09464(rhaR) Score=6.1 Pos=-104 [Rhodobacterales bacterium HTCC2654]
CCGATCA---ACGATCA
>RB2654_09469(rhaEW) Score=5.7 Pos=-50 [Rhodobacterales bacterium HTCC2654]
ATGATCG---TTGGTTG
# RNA - mini-ykkC
>RB2654_05847(COG4125) Score=27.4 Pos=-69 [Rhodobacterales bacterium HTCC2654]
CGGTCATCAGGACGACCTTCCCATCATGGATCAACACCGGGACGACCCGG
# RNA - Cobalamin
>RB2654_11383(cbtB) Score=92.6 Pos=-238 [Rhodobacterales bacterium HTCC2654]
CCACAAGGATAAGGCATGGTTCCCGACACGGCGCAAAGCGCCAAGGGAGAATATGGGAATGCGGAGGGGTGATCCAAACCGGAGCCTTCAGCCGCAGCCGCCCCCGCGACTGTGACGCGGCGAGCGCCCGCCGGATACCACTGAGCCTCGGCTCGGGAAGGTGGCGAAGCGCGACGACCCGCAAAGCCAGGAGACCTGCCATGTGAAACGAAACCCCACC
# RNA - serC
>RB2654_11979(serC) Score=63.7 Pos=7 [Rhodobacterales bacterium HTCC2654]
GGCGGGACACTCCGCCCCAACGCGGAGCATATATCTGGAAGGATACCATGACC
# RNA - SAM_alpha
>RB2654_19698(metY) Score=59.5 Pos=-120 [Rhodobacterales bacterium HTCC2654]
GCGATTGCCGTGGCGATTTGTCTTCCGGATTGCGGGCCACGTTAATCACTCCGCTAAAGAGGTCTGGGACGATGAACGCC
# RNA - TPP
>RB2654_14515(thiB) Score=58.8 Pos=-143 [Rhodobacterales bacterium HTCC2654]
CTGCCTCACCTCGGGGTGCCCGTGCGACGCAAGTCGTCCGGCTGAGATGCGAAAGCGAACCCGTTGAACCTGAACCGGCTAGCACCGGCGGAGGGAAGGTCAGGACCATCACA
>RB2654_21928(ykoF) Score=68.1 Pos=-100 [Rhodobacterales bacterium HTCC2654]
CACATAACCAGGGGTGCTCCTTCTCGGGGCTGAGATGCGCGATCCGGCGCGAACCCTTTCACAGCTGATCTGGATAATACCAGCGGAGCGAGGTGCTAGCATGTTCATAG
# RNA - ykkC-yxkD
>RB2654_08657(uctB) Score=76.5 Pos=-205 [Rhodobacterales bacterium HTCC2654]
CGTGCAGGACGCTTAGGGTTCCGCCGCGCCAAAGCGCGGGTCTGGTCCGAGAAGCGTCACCCATCCGGCAAATTCCGGCAGGGCACACGGCGGGCCAAAATCCCGGGAGAC
# RNA - Glycine
>RB2654_18583(gcvT) Score=44 Pos=-144 [Rhodobacterales bacterium HTCC2654]
ACGACAGCACTCTGGAGAGTGGCGCATGGGCGCCCGCCGAAGGGATAACGATCTCAGGCGAAAGGACAGAGGGGGCATC
>RB2654_18583(gcvT) Score=39.1 Pos=-240 [Rhodobacterales bacterium HTCC2654]
CCGCATCCACGTTGGGAGAATCTGGCGCCCGCCTGACCGGGACCAGTGCCGAAGGAGCAACCGCCCCGGAACCTCTCAGGCTTCAGGACCGCGTGGA
# RNA - SAM-SAH
>RB2654_18193(metK) Score=60.8 Pos=-56 [Rhodobacterales bacterium HTCC2654]
CCAACCGCCACAACGGCTTCCTGACGTGGCGGGGATATCATAACGGAGCA
# TF - AglR: RB2654_03744
>RB2654_03739(aglE) Score=5.6 Pos=-97 [Rhodobacterales bacterium HTCC2654]
CATCCAAAACGGTTTGGAGC
>RB2654_03744(aglR) Score=5.6 Pos=-170 [Rhodobacterales bacterium HTCC2654]
GCTCCAAACCGTTTTGGATG
# TF - HrcA: RB2654_13559
>RB2654_08122(groS) Score=7.4 Pos=-86 [Rhodobacterales bacterium HTCC2654]
TTAGCACTCACCCCCGGTGAGTGCCAA
# TF - MntR: RB2654_22338
>RB2654_12814(COG2132) Score=4.6 Pos=-98 [Rhodobacterales bacterium HTCC2654]
GGAGTTAAAAGATGCTGACTCG
>RB2654_22338(mntR) Score=6.5 Pos=-77 [Rhodobacterales bacterium HTCC2654]
AAAGTTAGACATGGCTAACTTA
# TF - CueR: RB2654_14855
>RB2654_14810(copZ) Score=5.3 Pos=-104 [Rhodobacterales bacterium HTCC2654]
CCCTTCCAGTCACTGGAAGGT
>RB2654_22238(copZ) Score=5.1 Pos=-60 [Rhodobacterales bacterium HTCC2654]
ACCTTCCAGCGGGGGGAAGCC
# TF - CadR-PbrR: RB2654_22398, RB2654_10324
>RB2654_22328(cadA) Score=5.3 Pos=-228 [Rhodobacterales bacterium HTCC2654]
AAGCTCTAGTTACTGTAGGGG
>RB2654_22408(PF01841) Score=5.1 Pos=-78 [Rhodobacterales bacterium HTCC2654]
AAGCTACAGTGACTGTAGCAA
>RB2654_10329(czcD2) Score=6.3 Pos=-50 [Rhodobacterales bacterium HTCC2654]
AACCTCTAGTCGCTAGAGGAA
>RB2654_22398(cadR) Score=5.7 Pos=-119 [Rhodobacterales bacterium HTCC2654]
ATCCTCTAGCTACTGTAGGTT
>RB2654_22323(PF03734) Score=5.3 Pos=-150 [Rhodobacterales bacterium HTCC2654]
AACCTCTAGTAGCTTTAGGAG
# TF - CceR (GapR): RB2654_15484
>RB2654_01815(zwf) Score=4.9 Pos=-60 [Rhodobacterales bacterium HTCC2654]
TTGGGTTAGCGCTAACAATC
>RB2654_03494(edd) Score=5.2 Pos=-65 [Rhodobacterales bacterium HTCC2654]
GGTTGTTAGCGCTATCACGA
>RB2654_16676(pykA) Score=5.3 Pos=-28 [Rhodobacterales bacterium HTCC2654]
GACTGTTACCGCAAACAGAC
>RB2654_15911(pckA) Score=5 Pos=-230 [Rhodobacterales bacterium HTCC2654]
TGGTGGTTGCGCAAACAGCC
>RB2654_15911(pckA) Score=4.6 Pos=-209 [Rhodobacterales bacterium HTCC2654]
CATTGCTTGCGCTAACGCGA
>RB2654_02429(gapA) Score=4.7 Pos=-176 [Rhodobacterales bacterium HTCC2654]
CCGCGTTTGCGTTAACGGTT
>RB2654_02429(gapA) Score=4.3 Pos=-164 [Rhodobacterales bacterium HTCC2654]
TAACGGTTCCGCTAACGCCC
>RB2654_02429(gapA) Score=5.1 Pos=-134 [Rhodobacterales bacterium HTCC2654]
ATATGTTTTCGCTAACACGC
>RB2654_17316(mdh) Score=4.4 Pos=-121 [Rhodobacterales bacterium HTCC2654]
CACCTTTAGCGGTATCAACG
>RB2654_18993(tal) Score=4.2 Pos=-47 [Rhodobacterales bacterium HTCC2654]
GTATGACACCGCTAACATTT
>RB2654_08617(scrK) Score=5.1 Pos=-36 [Rhodobacterales bacterium HTCC2654]
GACTGATACCGCTAACAACC
>RB2654_05195(fba) Score=4.4 Pos=-81 [Rhodobacterales bacterium HTCC2654]
ATGCGTTAGCGCGACCAGAA
>RB2654_03084(eno) Score=4.4 Pos=-85 [Rhodobacterales bacterium HTCC2654]
CACCGTTGGCGCAACCGCCC
>RB2654_02419(gapB) Score=5.4 Pos=-91 [Rhodobacterales bacterium HTCC2654]
TGATGTTAGCGGTAACGGCG
>RB2654_08617(scrK) Score=4.1 Pos=-68 [Rhodobacterales bacterium HTCC2654]
GGGTGATTGCGCAATCCGCG
>RB2654_02434(yedI) Score=4.3 Pos=-138 [Rhodobacterales bacterium HTCC2654]
GGGCGTTAGCGGAACCGTTA
>RB2654_02434(yedI) Score=4.7 Pos=-126 [Rhodobacterales bacterium HTCC2654]
AACCGTTAACGCAAACGCGG
>RB2654_02434(yedI) Score=5.1 Pos=-168 [Rhodobacterales bacterium HTCC2654]
GCGTGTTAGCGAAAACATAT
# TF - Chvl: RB2654_15916
>RB2654_15916(chvI) Score=7.4 Pos=-72 [Rhodobacterales bacterium HTCC2654]
GATTCT------------GATTCT
>RB2654_15916(chvI) Score=7.9 Pos=-90 [Rhodobacterales bacterium HTCC2654]
GATTCG------------GATTCT
# TF - MetR: RB2654_08000
>RB2654_08000(metR) Score=4.9 Pos=-47 [Rhodobacterales bacterium HTCC2654]
GTGAGACAAATTCAT
>RB2654_08005(metF) Score=4.9 Pos=-64 [Rhodobacterales bacterium HTCC2654]
ATGAATTTGTCTCAC
>RB2654_20213(metH2) Score=4.8 Pos=-89 [Rhodobacterales bacterium HTCC2654]
ATGAGCCAGTCTCAT
# TF - FnrN: RB2654_10044
>RB2654_06514(ctaC) Score=5.3 Pos=-192 [Rhodobacterales bacterium HTCC2654]
GCATTGATCTGCATCAATCG
>RB2654_10044(fnrN) Score=5.3 Pos=-29 [Rhodobacterales bacterium HTCC2654]
ACATTGATACGGATCAAATG
>RB2654_08222(ctaD) Score=5.6 Pos=-212 [Rhodobacterales bacterium HTCC2654]
TCCTTGACCCGGATCAAACA
>RB2654_10034(uspA) Score=5.4 Pos=-143 [Rhodobacterales bacterium HTCC2654]
ACCTTGATCCATGTCAAAAC
>RB2654_10034(uspA) Score=5.3 Pos=-100 [Rhodobacterales bacterium HTCC2654]
GATTTGACACATATCAAAGC
>RB2654_03389(hemA) Score=5.3 Pos=-127 [Rhodobacterales bacterium HTCC2654]
GGTTTGATCCACGTCAACGC
>RB2654_10049(hemN) Score=5.3 Pos=-52 [Rhodobacterales bacterium HTCC2654]
CATTTGATCCGTATCAATGT
>RB2654_10029(ccoN) Score=5.3 Pos=-168 [Rhodobacterales bacterium HTCC2654]
GCTTTGATATGTGTCAAATC
>RB2654_10029(ccoN) Score=5.4 Pos=-125 [Rhodobacterales bacterium HTCC2654]
GTTTTGACATGGATCAAGGT
>RB2654_10004(ccoG) Score=5.2 Pos=0 [Rhodobacterales bacterium HTCC2654]
ATGTTGATCCAAGTCAAGGC