# TF - NrtR: MED193_19424
>MED193_19424(nrtR) Score=6.4 Pos=-38 [Roseobacter sp. MED193]
TTATATCTAAATAGGTAATAA
>MED193_19424(nrtR) Score=6.4 Pos=-23 [Roseobacter sp. MED193]
TAATAACTAAATAGGATATAA
# TF - NrdR: MED193_08498
>MED193_03787(nrdJ) Score=4.9 Pos=-204 [Roseobacter sp. MED193]
CCACAATATCTAGTTG
# TF - Zur: MED193_01515
>MED193_01520(znuA) Score=5.6 Pos=-66 [Roseobacter sp. MED193]
GAGATGTTATAAAATTACATGAG
>MED193_01515(zur) Score=5.6 Pos=-111 [Roseobacter sp. MED193]
CTCATGTAATTTTATAACATCTC
# TF - HutC: MED193_01690
>MED193_01670(hutI) Score=5.3 Pos=-71 [Roseobacter sp. MED193]
TTTATGTCTAGACATATG
>MED193_01665(hutF) Score=5.3 Pos=-30 [Roseobacter sp. MED193]
CATATGTCTAGACATAAA
# TF - IscR: MED193_04321
>MED193_17504(hmuR) Score=4 Pos=69 [Roseobacter sp. MED193]
GTTGACTGTTTTTATCACC
>MED193_15812(TM1040_2633) Score=5.3 Pos=-139 [Roseobacter sp. MED193]
TCTGACTATTTTTGTCAGA
>MED193_04321(iscR) Score=4 Pos=-144 [Roseobacter sp. MED193]
CTTGACGAATTCCATCAGC
>MED193_19679(MED193_19679) Score=5.3 Pos=-118 [Roseobacter sp. MED193]
TCTGACAAAAATAGTCAGA
>MED193_19679(MED193_19679) Score=4.7 Pos=-91 [Roseobacter sp. MED193]
CTTGATTGTTTTAATCAGG
>MED193_19654(bfd) Score=4.4 Pos=-103 [Roseobacter sp. MED193]
CCTGACAAAAACAATAAGC
>MED193_19654(bfd) Score=4.5 Pos=-72 [Roseobacter sp. MED193]
CCTTATTGTTTTTGTCAGA
>MED193_12813(fbpB) Score=3.8 Pos=-58 [Roseobacter sp. MED193]
TCCGACCAAAATGATCGCA
>MED193_12793(fbpA) Score=4.2 Pos=-65 [Roseobacter sp. MED193]
ACTGACAAAAGAAGTCGGA
>MED193_22076(fecB) Score=4 Pos=-355 [Roseobacter sp. MED193]
CTTGACAAAACCTGTAAGG
# TF - Irr: MED193_17849
>MED193_04321(iscR) Score=5.3 Pos=-124 [Roseobacter sp. MED193]
ATCTTAGAACAATTCTAATTG
>MED193_10358(fssA) Score=6.4 Pos=-75 [Roseobacter sp. MED193]
AATTTAGAATAATTCTAAACC
# TF - NtrC: MED193_04611
>MED193_04621(nifR3) Score=4.7 Pos=-72 [Roseobacter sp. MED193]
CGCACAAGGATTAGGCA
>MED193_04621(nifR3) Score=5.2 Pos=-165 [Roseobacter sp. MED193]
TGCTTAAAATTTAGGCA
>MED193_04641(amtB2) Score=4.2 Pos=-130 [Roseobacter sp. MED193]
CGCCTATTCTTTAATCA
>MED193_15832(glnK) Score=4.3 Pos=-188 [Roseobacter sp. MED193]
CGCCTAATTTCTGGGCG
>MED193_07968(ureD) Score=4.2 Pos=-83 [Roseobacter sp. MED193]
TGCCCAAAAGTTACGCA
>MED193_05036(glnB) Score=4.2 Pos=-145 [Roseobacter sp. MED193]
CGCCTATTTTTAATGCA
>MED193_05036(glnB) Score=4.4 Pos=-125 [Roseobacter sp. MED193]
TGCCTACTTATTAATCA
>MED193_14852(nasT) Score=4.6 Pos=-91 [Roseobacter sp. MED193]
AGCCTAAAAATTGAGCA
>MED193_07963(urtA) Score=4.2 Pos=-201 [Roseobacter sp. MED193]
TGCGTAACTTTTGGGCA
>MED193_14842(nrtA) Score=4.5 Pos=-232 [Roseobacter sp. MED193]
TGCCCAAAAACTAGGCG
# TF - Mur: MED193_22541
>MED193_12968(sitA) Score=4.8 Pos=-56 [Roseobacter sp. MED193]
GTTGAGAATCGTTCTCATA
>MED193_12968(sitA) Score=5.1 Pos=-87 [Roseobacter sp. MED193]
GTTGAGAATAATTCTCATT
>MED193_17849(irr) Score=5 Pos=-40 [Roseobacter sp. MED193]
AATGCAATTCATTCGCAGT
# TF - LexA: MED193_03687
>MED193_12418(umuD) Score=0.2 Pos=-30 [Roseobacter sp. MED193]
GAACAAAGGCAGAAC
>MED193_07538(uvrD) Score=1.3 Pos=-57 [Roseobacter sp. MED193]
GAACAGAATGCGAAC
>MED193_03687(lexA) Score=1.5 Pos=-47 [Roseobacter sp. MED193]
GAACATGAATAGAAC
>MED193_03687(lexA) Score=-0.5 Pos=-58 [Roseobacter sp. MED193]
ACACAAAACGGGAAC
>MED193_09210(ruvC) Score=5.3 Pos=-64 [Roseobacter sp. MED193]
GTTCGCCTTTTGTGC
>MED193_03447(uvrA) Score=4.8 Pos=-117 [Roseobacter sp. MED193]
GTTCTTCTAACGTTC
>MED193_22781(PF04055) Score=5.2 Pos=-39 [Roseobacter sp. MED193]
GTTCTTCATTTGTTC
>MED193_04366(recA) Score=4.8 Pos=-93 [Roseobacter sp. MED193]
GTTCTCCTTTTGACC
>MED193_08438(PF06319) Score=5.2 Pos=-26 [Roseobacter sp. MED193]
GTTCTCTTATTGTTC
>MED193_12443(umuD) Score=5.1 Pos=-44 [Roseobacter sp. MED193]
GTTCACTTTATGTTC
# TF - LiuR: MED193_05934
>MED193_05934(liuR) Score=6.4 Pos=-105 [Roseobacter sp. MED193]
GCTTACGTAAACGTCAAG
# TF - RutR: MED193_05524
>MED193_06029(upp) Score=5.4 Pos=-97 [Roseobacter sp. MED193]
CTTTGACCATCAGATCAAAA
>MED193_10378(pntD) Score=4.7 Pos=-154 [Roseobacter sp. MED193]
TTCGCACCAAACGGTCAAAA
>MED193_05534(pydX) Score=6.1 Pos=-74 [Roseobacter sp. MED193]
ATTTTACCAGTTGATAAAAA
>MED193_05524(rutR) Score=6 Pos=-155 [Roseobacter sp. MED193]
ATTTGACCAACTGGTCAAAC
>MED193_12973(deoC) Score=5.5 Pos=-105 [Roseobacter sp. MED193]
ATTTGTCCAAAAGGTCAAAT
>MED193_17244(pytM) Score=5 Pos=74 [Roseobacter sp. MED193]
TTTTTACCCTTTGGACAAGA
>MED193_05484(pytD) Score=5.1 Pos=-60 [Roseobacter sp. MED193]
ATTTGATCGAAGGGTCAAAT
>MED193_05519(pydC) Score=6.1 Pos=-119 [Roseobacter sp. MED193]
GTTTGACCAGTTGGTCAAAT
# TF - PhnF: MED193_17599
>MED193_17604(phnG) Score=5.1 Pos=-52 [Roseobacter sp. MED193]
TTGTCTAGTTGTATAGAACA
>MED193_17599(phnF) Score=4.8 Pos=-76 [Roseobacter sp. MED193]
TGTTCTATACAACTAGACAA
# TF - EutR: MED193_04751
>MED193_04751(eutR) Score=6.9 Pos=-80 [Roseobacter sp. MED193]
ATTGTGTTGATACAAT
>MED193_04751(eutR) Score=5.7 Pos=-48 [Roseobacter sp. MED193]
AGAGTTTTGATACAAT
>MED193_04751(eutR) Score=7.4 Pos=-6 [Roseobacter sp. MED193]
ATTGTAATGGTACAAT
# TF - PaaR: MED193_17324
>MED193_17304(paaZ) Score=6.7 Pos=-114 [Roseobacter sp. MED193]
ATAAACCGACCGGACGGTCAAT
>MED193_17309(paaF) Score=6.7 Pos=-95 [Roseobacter sp. MED193]
ATTGACCGTCCGGTCGGTTTAT
# TF - EutR: MED193_10021
>MED193_10026(eutA) Score=5.1 Pos=-64 [Roseobacter sp. MED193]
TCTGAAATTATATTGACAGA
>MED193_10026(eutA) Score=5.1 Pos=-34 [Roseobacter sp. MED193]
CGTGAAAAGATTTTTCCAAA
>MED193_10021(eutR) Score=5.1 Pos=-143 [Roseobacter sp. MED193]
TTTGGAAAAATCTTTTCACG
>MED193_10021(eutR) Score=5.1 Pos=-113 [Roseobacter sp. MED193]
TCTGTCAATATAATTTCAGA
# RNA - Cobalamin
>MED193_19614(cfrX) Score=93.5 Pos=-216 [Roseobacter sp. MED193]
GCGCAAGGGGGTTTTTGTTGGTTCCTGCAAATTGCAGGCGAAGAGGGAATGTGACAGGCTGATAGGGATTTTTGCTATCAGCTCTCAAGCACAGCCGCCCCCGCGACCGTGACCGGAAAGGTCTCTGATGCCACTGGCCCACCGTGCCGGGAAGGCAAGAGCACCGCAGACAGGCATCGCCCGTCGAAATCCGCAAGCCGGGAGACCTGCCAACGCATGAGACAACGAG
>MED193_19549(cbtC) Score=126.3 Pos=-280 [Roseobacter sp. MED193]
AGAGCAGTGACCTATCGATGGTTCCACTGAAGCCCAAGGCTTTTGGATGAAAAGGGAATCCGGTGAGGTGTAGCCAAAAGGCGCCAAACCCGGAACTGCCCCCGCAACTGTGAGCGGCGAGCCACTGGGATAAGCCACTGATCTGCACAGCAGGTCGGGAAGGCCCCAGACCGGCCCAGACCCGCAAGTCAGGAGACCTGCCCTCGTGAGTTGACCATAG
>MED193_11852(RSP_0787) Score=123.2 Pos=-441 [Roseobacter sp. MED193]
ATAGCCGTGTAACGGATGGTTCTTGCGACGCATAAATCTAGTGTCCGGGATGAAAAGGGAACGTGGTGCGGAGAGGTTAGTTCAGCCGATCCAATTCCACGACTGCCCCCGCAACTGTAAGCGGTGAGCGCTTCGGATTAACCACTGGTACAGGGACATGATCCCCGGCTGGGAAGGACCGAAATCGCGTTGACCCGCAAGTCAGGAGACCTGCCATCACGTATGAAACTCGAAA
>MED193_18509(btuF) Score=112 Pos=-303 [Roseobacter sp. MED193]
TCTAAACGGCAAGAGTCGGTTTTCTAGGAAATTAATAGGGAATTCGTGGCGACAAACCTGTAGCTAAGCGAAACTGCCCCCGCAACTGTATGCGATACGCCGCATTTCGAGATCCACTGGGCTGAAGGGCCTGGGAAGGTGAAATGAGGCTTAAGTCGTTAGTCAGGAGACCTGCCGACATGACACTGGAACCGGA
# RNA - S15
>MED193_13063(rpsO) Score=21.6 Pos=-60 [Roseobacter sp. MED193]
GCCTGCGCTGGACGACATCCCGGCCTGTGCCATCACTCTAACCTTTTAAAGGAGACCCCGATGTCGATCACAGCTGAAGAAAAAGCACGCCTGATGAAAGAATTCGCAACCAAAGAAGG
# RNA - serC
>MED193_13323(serC) Score=66.7 Pos=-53 [Roseobacter sp. MED193]
GCGGCGGGACACCCTTCCCCAACGAAGGGCAGATATCTGTAAGGATAGCATCA
# RNA - SAM_alpha
>MED193_20939(metY) Score=58.9 Pos=-135 [Roseobacter sp. MED193]
ATCAACACCGTGGCGATTTGTAACCGGATTGCGGGCCACGTTAAATATCCGCTAAAGAGGTCAGGATGTGAAGGACCC
# RNA - TPP
>MED193_07728(thiC) Score=49.9 Pos=-246 [Roseobacter sp. MED193]
TAGCCTACGCAGGGGAGTCCCACCGAGGGGACTGAGAGGCTGACAGGGCAGAGCAATCTGACCGGCGACGCGACCCTTAGAACCTGACCCAGTTGACACTGGCGTAGGAAGCTAGGACGCATTGCTTGC
>MED193_14432(thiB) Score=67 Pos=-128 [Roseobacter sp. MED193]
GAGATACCTCGGGGTGCCAGGACGACATTGGCTGAGAGTAAACCCGTTGAACCTGAACCGGCTAAAACCGGCGGAGGGAAGGTTTCGGAGTTCCTCCA
# RNA - FMN
>MED193_14447(ribH2) Score=98.8 Pos=-292 [Roseobacter sp. MED193]
GCGCTGTTCTCAGGGCGGGGCGAAATTCCCCACCGGCGGTATGCGAGGGGTCTCCCTTTGCAAGCCCGCGAGCGGCTTTTGCTGTGTCCACGATCCAAAAAGTGGGAACCGGTTTTTGGATGAATTGTGGAACACCAGCAAAAGTGTCAGCAGATCTGGTGTGATTCCAGAGCCGACGGTCATAGTCCGGATGGAAGAGAACGTGC
# RNA - Glycine
>MED193_00175(dadA) Score=55.4 Pos=-187 [Roseobacter sp. MED193]
CCAAGCTGTCACAGGAGAGGCCGACCCAGTCGGCGCCGAAGGAGCAACCCCCCGGCACCTCTCAGGCAAAAGGACTGTGATCAGCGC
>MED193_09370(gcvH) Score=32.7 Pos=-348 [Roseobacter sp. MED193]
CCCTGTGTATATGGGAGAACCGTCGCTGTGATGTCGGGCCTTTGGCCTGCCCCGCAAGCTCGGTGCCGAAGGAGCAACCGCCCCGGAAACTCTCAGGCAGAAGGGACCTTATAC
>MED193_09370(gcvH) Score=42.2 Pos=-235 [Roseobacter sp. MED193]
CACGAAAGACTCTGGAGAGAGCTCGAGGGAACTCGAGCCGCCGAAGGGATAACGATCTCAGGCACCGGGACAGAGGGGGCATC
# RNA - SAM-SAH
>MED193_17904(metK) Score=51.9 Pos=-54 [Roseobacter sp. MED193]
TCCTCTCACAACGGCTTCCTGACGTGACGAGGTTAACCCAATGGAGCATT
# TF - HrcA: MED193_13862
>MED193_20209(groS) Score=7.1 Pos=-93 [Roseobacter sp. MED193]
TTAGCACTCATCAGGTGTGAGTGATAA
# TF - SoxR: MED193_10733
>MED193_10733(soxR) Score=6.1 Pos=-57 [Roseobacter sp. MED193]
TTCTAAACCTAACTTTAGCT
>MED193_22126(PF01370) Score=6.2 Pos=-57 [Roseobacter sp. MED193]
AGCTAAAGTTAGCTTTAGAT
>MED193_10738(PF00903) Score=6.1 Pos=-71 [Roseobacter sp. MED193]
AGCTAAAGTTAGGTTTAGAA
# TF - CueR: MED193_02425, MED193_18164
>MED193_02420(copA) Score=4.7 Pos=-36 [Roseobacter sp. MED193]
ACCTTCCGGTAACTGGAAGCC
>MED193_18159(copA) Score=5 Pos=-62 [Roseobacter sp. MED193]
ACCTTCCCCTAACTGGAGGCC
# TF - CadR-PbrR: MED193_02240, MED193_15022
>MED193_02180(cadA) Score=5.2 Pos=-60 [Roseobacter sp. MED193]
AAGCTCTAGCTACTGTAGGGG
>MED193_02240(cadR) Score=6.2 Pos=-117 [Roseobacter sp. MED193]
ATCCTCTAGCTACTAGAGGTT
>MED193_02255(PF01841) Score=4.9 Pos=-57 [Roseobacter sp. MED193]
AAGCTACAGTAACTATAGAGA
>MED193_02170(PF03734) Score=5.6 Pos=-88 [Roseobacter sp. MED193]
AACCTCTAGCCACTAGAAGTC
>MED193_15017(cadA) Score=5.9 Pos=-58 [Roseobacter sp. MED193]
AACCTCTAGTCACTGTAGGTC
# TF - BioR
>MED193_07723(bioB) Score=4.8 Pos=-164 [Roseobacter sp. MED193]
TTATAGATAA
>MED193_07723(bioB) Score=3.6 Pos=-132 [Roseobacter sp. MED193]
TTATAGATGG
>MED193_07723(bioB) Score=4.1 Pos=-67 [Roseobacter sp. MED193]
ATATCTATAA
# TF - SPO0590: MED193_17089
>MED193_17079(dctP) Score=6.7 Pos=-275 [Roseobacter sp. MED193]
CCATGTAAGCGCTTACATTG
>MED193_17079(dctP) Score=6.1 Pos=-298 [Roseobacter sp. MED193]
CAATGTAAGGGCTTGCATAA
>MED193_17089(SPO0590) Score=6.7 Pos=-136 [Roseobacter sp. MED193]
CAATGTAAGCGCTTACATGG
>MED193_17089(SPO0590) Score=6.1 Pos=-113 [Roseobacter sp. MED193]
TTATGCAAGCCCTTACATTG
# TF - CceR (GapR): MED193_14932, MED193_10066
>MED193_12017(pykA) Score=5.2 Pos=-78 [Roseobacter sp. MED193]
TGCTGTTTGCGGTAACATTT
>MED193_16479(pckA) Score=4.3 Pos=-183 [Roseobacter sp. MED193]
CAATGGTTGCGCTAAACTCC
>MED193_16479(pckA) Score=4.8 Pos=-162 [Roseobacter sp. MED193]
CCTTGGTGGCGCTAACTGCG
>MED193_16479(pckA) Score=3.7 Pos=-95 [Roseobacter sp. MED193]
AACCGGTGGCGATACCGGCA
>MED193_03557(gapA) Score=4.5 Pos=-132 [Roseobacter sp. MED193]
AAGCGTTAGCGCCACCGTGT
>MED193_03557(gapA) Score=3.9 Pos=-99 [Roseobacter sp. MED193]
TCCCGTTAACGCCACCGGTA
>MED193_03557(gapA) Score=4.1 Pos=-77 [Roseobacter sp. MED193]
AACCGTTAACGCCACCGGTC
>MED193_03557(gapA) Score=4.6 Pos=-58 [Roseobacter sp. MED193]
CTAGTTTTGCGCTAACATAC
>MED193_10071(gapB) Score=4 Pos=-110 [Roseobacter sp. MED193]
CTCCGTTATCGATACCGATA
>MED193_10071(gapB) Score=4.9 Pos=-88 [Roseobacter sp. MED193]
TAATGTTAGCGATAACGAAT
>MED193_07548(pycA) Score=4.2 Pos=-104 [Roseobacter sp. MED193]
GAATGAGAGCGCAATCATGC
>MED193_09260(tal) Score=4 Pos=-48 [Roseobacter sp. MED193]
AAAGGCTAGCGCAATCAAGG
>MED193_03562(yedI) Score=4.6 Pos=-156 [Roseobacter sp. MED193]
GTATGTTAGCGCAAAACTAG
>MED193_03562(yedI) Score=4.1 Pos=-137 [Roseobacter sp. MED193]
GACCGGTGGCGTTAACGGTT
>MED193_03562(yedI) Score=4.5 Pos=-82 [Roseobacter sp. MED193]
ACACGGTGGCGCTAACGCTT
>MED193_20764(fba) Score=4.7 Pos=-100 [Roseobacter sp. MED193]
GCCCGTTAGCGCAAGCGCTT
>MED193_22551(eno) Score=4.5 Pos=-136 [Roseobacter sp. MED193]
TACCGGTGGCGCAAACAGGT
>MED193_22551(eno) Score=4 Pos=-116 [Roseobacter sp. MED193]
GAATGGTAACGTTAACTGTG
>MED193_22551(eno) Score=5.1 Pos=-87 [Roseobacter sp. MED193]
TGCCGTTAGCGGTAACGAAG
>MED193_10066(cceR2) Score=4.9 Pos=-119 [Roseobacter sp. MED193]
ATTCGTTATCGCTAACATTA
>MED193_17414(pgi) Score=5 Pos=-77 [Roseobacter sp. MED193]
TACCGTTATCGCTAACAGTA
# TF - Chvl: MED193_16484
>MED193_16484(chvI) Score=8.2 Pos=-93 [Roseobacter sp. MED193]
GATTCG------------GATTCG
# TF - HypR2: MED193_09635
>MED193_09635(hypR2) Score=4.6 Pos=-86 [Roseobacter sp. MED193]
TATTGGATCCAATT
>MED193_08463(hypY) Score=4.5 Pos=-39 [Roseobacter sp. MED193]
GATTGGATACAATA
>MED193_09625(hypD) Score=4.6 Pos=-151 [Roseobacter sp. MED193]
AATTGGATCCAATA
# TF - MetR: MED193_22236
>MED193_22236(metR) Score=5 Pos=-49 [Roseobacter sp. MED193]
GTGAAACAATTTCAT
>MED193_22231(metF) Score=5 Pos=-62 [Roseobacter sp. MED193]
ATGAAATTGTTTCAC
# TF - TauR: MED193_12203
>MED193_12208(xsc) Score=9.1 Pos=-116 [Roseobacter sp. MED193]
TTGGATCTAT------------CTGGCCCTAT
>MED193_12173 Score=8.5 Pos=-130 [Roseobacter sp. MED193]
CTGGATGCAA------------CTGGCCCTAG
# TF - FnrN: MED193_11238
>MED193_08963(ctaC) Score=5.4 Pos=-178 [Roseobacter sp. MED193]
TTTTTGATCTAAATCAAGAA
>MED193_11238(fnrN) Score=5.3 Pos=-29 [Roseobacter sp. MED193]
ACTTTGACTTGGATCAAACG
>MED193_21064(hemA) Score=5.4 Pos=-162 [Roseobacter sp. MED193]
TATTTGACCTGTATCAAAGT
>MED193_08728(ctaD) Score=5.6 Pos=-122 [Roseobacter sp. MED193]
ATCTTGATCCAGATCAAACT
>MED193_11233(uspA) Score=5.5 Pos=-114 [Roseobacter sp. MED193]
GCATTGATCTGCATCAAGAC
>MED193_11228(ccoN) Score=5.5 Pos=-93 [Roseobacter sp. MED193]
GTCTTGATGCAGATCAATGC
>MED193_11193(ccoG) Score=5.4 Pos=-180 [Roseobacter sp. MED193]
TTTTTGATCCACGTCAAAGA