# TF - TauR2: RPA0105
569525	RPA0105	TauR2

569524	RPA0104	COG1574
569523	RPA0103	COG0523
569522	RPA0102	oppA
569521	RPA0101	oppB
569520	RPA0100	oppC
569519	RPA0099	oppD
569518	RPA0098	oppF

569532	RPA0112	betB COG1012 (PutA)
569531	RPA0111	COG0730


# TF - NadQ: RPA1063
570486	RPA1055	nadA
570485	RPA1054	nadB
570484	RPA1053	nadC


# TF - NrdR: RPA2725
572424	RPA2977	nrdJ


# TF - NikR: RPA4756
574229	RPA4757	omp_Ni

574228	RPA4756	nikR


# TF - Zur: RPA0517
570894	RPA1462	yciC2

573842	RPA4384	PF11162
573843	RPA4385	omr

570288	RPA0858	znuC
570289	RPA0859	znuB
570290	RPA0860	znuA
570291	RPA0861	yciC
570292	RPA0862	PF00400


# TF - NnrR: RPA4143
573603	RPA4145	nirK
573604	RPA4146	nirV

570917	RPA1485	nnrU

570885	RPA1452	null

570918	RPA1486	nnrS

570886	RPA1453	norE
570887	RPA1454	norF

570363	RPA0932	nnrX
570364	RPA0933	PF01136
570365	RPA0934	PF01136

570362	RPA0931	ubiD
570361	RPA0930	ubiX

573601	RPA4143	nnrR

571494	RPA2059	PF02915

571495	RPA2060	nosR
571496	RPA2061	nosZ
571497	RPA2062	nosD
571498	RPA2063	nosF
571499	RPA2064	nosY
571500	RPA2065	nosL
571501	RPA2066	nosX

570888	RPA1455	norC
570889	RPA1456	norB
570890	RPA1457	norQ
570891	RPA1458	norD


# TF - Irr: RPA0424, RPA2339
573761	RPA4303	mbfA

573056	RPA3600	bfr

574101	RPA4636	null
574100	RPA4635	feoB

571556	RPA2121	hmuP
571555	RPA2120	hmuT
571554	RPA2119	hmuU
571553	RPA2118	hmuV

573610	RPA4152	fbpA
573611	RPA4153	fbpB

571559	RPA2124	hmuR
571560	RPA2125	null
571561	RPA2126	null
571562	RPA2127	exbB1
571563	RPA2128	exbD1
571564	RPA2129	tonB

573332	RPA3876	fumA

571310	RPA1876	fhuA
571309	RPA1875	PF03929

572643	RPA3195	iorAB


# TF - NtrC: RPA2593
572413	RPA2966	glnB
572414	RPA2967	glnA

572033	RPA2591	nifR3
572034	RPA2592	ntrB
572035	RPA2593	ntrC

573125	RPA3669	urtA
573124	RPA3668	urtB
573123	RPA3667	urtC
573122	RPA3666	urtD
573121	RPA3665	urtE
573120	RPA3664	ureD
573119	RPA3663	ureA
573118	RPA3662	ureB
573117	RPA3661	null
573116	RPA3660	ureC

570843	RPA1410	uctA
570842	RPA1409	uctB
570841	RPA1408	uctC
570840	RPA1407	uahC
570839	RPA1406	uahB
570838	RPA1405	uahA

569697	RPA0274	glnK
569698	RPA0275	amtB

570905	RPA1473	dppA
570904	RPA1472	dppB
570903	RPA1471	dppC
570902	RPA1470	dppDE


# TF - Mur: RPA0450
572149	RPA2706	mntH

569849	RPA0424	irr1


# TF - LexA: RPA2903
571235	RPA1801	imuA
571236	RPA1802	imuB
571237	RPA1803	dnaE2

572347	RPA2903	lexA

572261	RPA2816	uvrA

570464	RPA1033	PF04055

572247	RPA2802	uvrD2

572535	RPA3089	radA

573307	RPA3851	recA

573838	RPA4380	rna

570531	RPA1099	ruvC
570532	RPA1100	ruvA
570533	RPA1101	cdd
570534	RPA1102	ruvB

569741	RPA0318	yifB

570048	RPA0620	rmuC

572259	RPA2814	ssb


# TF - PsrA: RPA3290
572739	RPA3290	psrA

572738	RPA3289	acdH


# TF - VanR: RPA3620
573075	RPA3619	vanA
573076	RPA3620	vanR
573077	RPA3621	vanB


# TF - PhnF: RPA0696
570125	RPA0696	phnF

570124	RPA0695	phnG
570123	RPA0694	phnH
570122	RPA0693	phnI
570121	RPA0692	phnJ
570120	RPA0691	phnK
570119	RPA0690	phnL
570118	RPA0689	phnM
570117	RPA0688	phnN


# TF - PaaR: RPA3769
571159	RPA1725	paaZ
571160	RPA1726	blr2898

573225	RPA3769	paaR

573475	RPA4019	livK
573476	RPA4020	livH
573477	RPA4021	livF
573478	RPA4022	livM1
573479	RPA4023	livM2

571158	RPA1724	paaY
571157	RPA1723	paaK

573224	RPA3768	paaA
573223	RPA3767	paaB
573222	RPA3766	paaC
573221	RPA3765	paaD
573220	RPA3764	paaE


# RNA - Cobalamin
570425	RPA0994	crdX

571832	RPA2397	metE

571526	RPA2091	null
571525	RPA2090	cbiC
571524	RPA2089	cbiL
571523	RPA2088	cbiH

570142	RPA0713	cfrX
570143	RPA0714	cobU
570144	RPA0715	cobW
570145	RPA0716	cobN
570146	RPA0717	btuR
570147	RPA0718	cbiP

571529	RPA2094	cobT
571530	RPA2095	cobS
571531	RPA2096	cbiP
571532	RPA2097	cobF

570153	RPA0724	hoxN
570152	RPA0723	btuC1
570151	RPA0722	btuD1

571516	RPA2081	btuF1

574276	RPA4803	btuB

569831	RPA0407	btuB2
569830	RPA0406	btuN


# RNA - mini-ykkC
571719	RPA2284	ykkc

570840	RPA1407	amt1
570839	RPA1406	amt2
570838	RPA1405	ucaA
570837	RPA1404	ucaB


# RNA - TPP
573029	RPA3573	thiO
573030	RPA3574	thiS
573031	RPA3575	thiG
573032	RPA3576	thiE
573033	RPA3577	thiC


# RNA - serC
573767	RPA4309	serC
573766	RPA4308	serA


# RNA - speF
570300	RPA0870	speF


# RNA - Glycine
573304	RPA3848	gcvT
573305	RPA3849	gcvH
573306	RPA3850	gcvP


# RNA - SAM_alpha
574239	RPA4766	metY

573901	RPA4437	metX
573900	RPA4436	metW


# RNA - ykkC-yxkD
570843	RPA1410	uctB
570842	RPA1409	uctP
570841	RPA1408	uctA
570840	RPA1407	amt3
570839	RPA1406	amt4
570838	RPA1405	ucaA
570837	RPA1404	ucaB


# RNA - Trp_leader
573961	RPA4498	trpEG


# TF - NifA: RPA4632
570393	RPA0962	hupS
570394	RPA0963	hupL
570395	RPA0964	hupC

570806	RPA1373	nifE
570805	RPA1372	nifN
570804	RPA1371	nifX

574070	RPA4605	fixB
574069	RPA4604	fixA
574068	RPA4603	fixC
574067	RPA4602	fixX

574075	RPA4610	iscN
574074	RPA4609	nifU
574073	RPA4608	nifS
574072	RPA4607	nifV
574071	RPA4606	nifW

574085	RPA4620	nifH
574084	RPA4619	nifD
574083	RPA4618	nifK
574082	RPA4617	nifE
574081	RPA4616	nifN
574080	RPA4615	nifX
574079	RPA4614	PF03270
574078	RPA4613	PF05082
574077	RPA4612	fdxB
574076	RPA4611	nifQ

574096	RPA4631	fdxN
574095	RPA4630	nifB
574094	RPA4629	frxA
574093	RPA4628	hesB
574092	RPA4627	RPA4627
574091	RPA4626	PF05484
574090	RPA4625	nifZ
574089	RPA4624	nifZ
574088	RPA4623	nifT

574099	RPA4634	xdhC

570432	RPA1001	cheY
570431	RPA1000	nifO

574098	RPA4633	fixR


# TF - HrcA: RPA0330
570573	RPA1141	groS
570572	RPA1140	groL

571600	RPA2165	groS
571599	RPA2164	groL


# TF - CadR-PbrR: RPA3261
572708	RPA3260	cadA


# TF - ModE: RPA0147, RPA4718
574190	RPA4718	modE
574189	RPA4717	modA
574188	RPA4716	modB
574187	RPA4715	modC

569572	RPA0152	RPA0152
569571	RPA0151	RPA0151
569570	RPA0150	RPA0150
569569	RPA0149	RPA0149
569568	RPA0148	modC2
569567	RPA0147	modE


# TF - PdxR: RPA2797
572243	RPA2798	PF03594
572244	RPA2799	pdxK

572241	RPA2796	glyA
572240	RPA2795	PF01168


# TF - FnrN/FixK/AadR: RPA4250, RPA4234
570937	RPA1505	hemC
570938	RPA1506	bchI
570939	RPA1507	bchD

573692	RPA4234	aadR

573693	RPA4235	blr6062

569437	RPA0019	ccoN
569436	RPA0018	ccoO
569435	RPA0017	ccoQ
569434	RPA0016	ccoP
569433	RPA0015	ccoG
569432	RPA0014	ccoH
569431	RPA0013	ccoI
569430	RPA0012	ccoS

573965	RPA4502	ompW

574110	RPA4645	cbbF
574109	RPA4644	cbbP
574108	RPA4643	cbbT1
574107	RPA4642	cbbA
574106	RPA4641	cbbM

571353	RPA1919	ccmI
571354	RPA1920	ccmE
571355	RPA1921	ccmF
571356	RPA1922	ccmH

571101	RPA1668	bchE

571774	RPA2339	irr

573699	RPA4241	COG2524

570284	RPA0854	hemA

573700	RPA4242	COG2187

570522	RPA1090	RPA1090

573926	RPA4462	null

573722	RPA4264	nuoA
573721	RPA4263	nuoB
573720	RPA4262	nouD
573719	RPA4261	nuoE
573718	RPA4260	nuoF
573717	RPA4259	nuoG
573716	RPA4258	nuoH
573715	RPA4257	nuoI
573714	RPA4256	nuoJ
573713	RPA4255	nuoK
573712	RPA4254	nuoL
573711	RPA4253	nuoM
573710	RPA4252	nuoN

573707	RPA4249	bll2758

572461	RPA3015	phyB1
572462	RPA3016	phyB2
572463	RPA3017	rphyB
572464	RPA3018	COG0642

570437	RPA1006	mhpA
570438	RPA1007	mhpB

570957	RPA1525	pufB
570958	RPA1526	pufA

574166	RPA4694	COG3181
574167	RPA4695	ligR

570099	RPA0670	hbaB
570100	RPA0671	hbaC
570101	RPA0672	hbaD

570656	RPA1224	iorA
570657	RPA1225	iorB
570658	RPA1226	korA
570659	RPA1227	korB
570660	RPA1228	korC
570661	RPA1229	paaK

573701	RPA4243	phaC

573603	RPA4145	nirK
573604	RPA4146	nirV

570175	RPA0746	mtrA

570086	RPA0657	badD
570087	RPA0658	badE
570088	RPA0659	badF
570089	RPA0660	badG
570090	RPA0661	badA

569682	RPA0260	RPA0260

570445	RPA1014	bsr3073


# TF - RPA0105: RPA0105
569524	RPA0104	COG1574
569523	RPA0103	COG0523
569522	RPA0102	oppA
569521	RPA0101	oppB
569520	RPA0100	oppC
569519	RPA0099	oppD
569518	RPA0098	oppF

569532	RPA0112	betB
569531	RPA0111	COG0730


# TF - FixJ: RPA4247
573708	RPA4250	fixK