# TF - NadQ: mll9106, mll5836 87227 mll5835 nadA1 87226 mll5834 nadB1 87225 mll5833 nadC1 89517 mll9104 nadA2 89516 mll9103 nadB2 89515 mll9102 nadC2 # TF - NrdR: mlr8403 82799 mll0136 nrdJ # TF - SahR: mll1589 86611 mll5088 ahcY 83659 mlr1220 bhmT 83675 mlr1243 metH2 83942 mll1589 sahR 83941 mll1587 metF # TF - Zur: mll3299 89229 mll8315 znuC 89228 mll8314 znuB 89227 mll8313 znuA # TF - HutC: mlr7110, mll8317 88286 mlr7106 COG1028 (FabG) 88287 mlr7107 hisD 88288 mlr7108 COG1063 (Tdh) 88289 mlr7110 hutC 89233 mlr8319 hutI 89234 mlr8321 hutH 89235 mlr8322 hutG 89236 mlr8323 hutU 89237 mlr8324 hutD 88290 mlr7111 SMa0403 88285 mll7105 hisC 89232 mll8318 hutF 89231 mll8317 hutC # TF - RirA: mlr1147 85897 mll4168 exbB 85896 mll4167 exbD 85895 mll4165 tonB 83606 msl1154 hmuP 83605 mll1152 hmuS 83604 mll1151 hmuT 83603 mll1150 hmuU 83602 mll1149 hmuV 85384 mlr3495 fbpA 85385 mlr3497 fbpB 85386 mlr3498 fbpC 88711 mlr7638 cycF 88712 mlr7639 cycG 83601 mlr1147 rirA 83607 mlr1155 hmuR 83608 mlr1156 null # TF - Irr: mlr5570 86801 mll5315 fssA 86973 mlr5523 iprA 86974 msr5525 bfd 86975 mlr5526 bfr 86231 mlr4601 mbfA 88140 mlr6940 katG 82707 mlr0015 sufS2 1782990 mlr0016 sufB 82709 mlr0017 null 82710 mlr0019 sufC 82711 mlr0020 sufD 82712 mlr0021 sufS1 82713 mlr0023 PF01883 82714 mlr0024 sufA 83601 mlr1147 rirA 86267 mlr4647 PF00033 86029 mll4333 ccmA 86028 mll4332 ccmB 86027 msl4331 ccmD 86026 mll4330 ccmG # TF - NagQ: mll4768 86365 mlr4770 murQ 86366 mlr4771 nagT 86367 mlr4772 nagU 86368 mlr4774 nagV 86369 mlr4776 mlr4776 86370 mlr4777 nagD 86371 mlr4779 nagW 86364 mll4769 nagK 86363 mll4768 nagQ 86362 mll4767 nagB2 86361 mll4766 nagA # TF - GlcC: mll6911 88118 mll6911 glcC 88117 mll6909 lldD 88120 mlr6916 glcD 88121 mlr6918 null 88122 mlr6919 glcE 88123 mlr6920 glcF 88119 mlr6914 mlr6914 # TF - NtrC: mlr0398 82959 mll0345 glnB 82958 mll0343 glnA 85962 mll4247 glnK 85961 mll4246 amtB # TF - ModE: mll1462 83847 mll1465 modA 83846 mll1464 modB 83845 mll1463 modC # TF - LexA: mlr0626 86433 mlr4857 rmuC 83195 mlr0626 lexA 83291 mlr0750 uvrA 88534 mll7417 PF04055 82719 mlr0030 recA 88944 mlr7946 uvrD2 83286 mll0743 ssb 83403 mlr0901 parE 83875 mlr1503 uvrD 86097 mlr4426 imuA 83814 mll1421 PF01443 84680 mll2568 greA 83376 mlr0866 dinP 85708 mll3901 ruvC # TF - LiuR: mlr5623, mll1317 88561 mlr7452 acdH2 88562 mlr7453 echH 86009 mll4308 mdh 86008 mll4306 sucC 86007 mll4305 null 86006 mll4304 null 86005 mll4303 sucD 86004 mll4302 null 86003 mll4301 sucA 86002 mll4300 sucB 87049 mlr5623 liuR2 88772 mll7718 PF09917 87050 mlr5624 acdH 87051 mlr5626 acdL 87052 mlr5628 acdA 87053 mlr5629 acdB 87054 mlr5630 null 83734 mll1317 liuR1 # TF - NifA: mll5857, mll5837 87259 mll5873 ahpC1 87684 mlr6364 cpxP 87685 mlr6365 cpxR 87260 mlr5875 mlr5875 87261 mlr5876 cpxA 87255 msr5868 PF05082 87256 mlr5869 fdxB 87257 mlr5871 nifQ 87477 mll6127 ompW 87245 mll5855 nifB 87244 msl8750 fdxN 87243 mll5854 nifZ 87242 msl5852 nifT 87250 mll5862 fixB 87249 mll5861 fixA 87248 mll5860 fixC 87247 msl5859 fixX 87246 mll5857 nifA 87314 mll5942 iscN 87313 mll5941 frxA 87287 mlr5905 nifH 87288 mlr5906 nifD 87289 mlr5907 nifK 87290 mlr5908 nifE 87291 mlr5909 nifN 87292 mlr5911 nifX 87293 mlr5912 PF03270 87305 msr5928 PF05082 87306 mlr5930 fdxB # TF - XylR: mlr3714 86564 mlr5033 xylB 85562 mlr3714 xylR 85561 mll3713 xylF 85560 mll3711 xylH 85559 mll3710 xylG # TF - RutR: mlr1634 85115 mlr3148 pntD 85119 mlr3154 pntA 85120 mlr3155 pntB 85121 mlr3157 pntC 85122 mlr3158 cdd 85123 mlr3159 deoD 85124 mlr3160 deoA 83985 mll1646 pydX 83984 mll1644 mll1644 83983 mll1643 pydA 83976 mlr1634 rutR 85905 mll4178 pytM 85904 mll4176 pytN 85903 mll4175 pytO 85902 mll4174 pytQ 83975 mll1632 praX 83974 mll1631 pydC 83973 mll1629 pydB # TF - PhnF: mll3341 85265 mlr3342 phnG 85266 mlr3343 phnH 85267 mlr3344 phnI 85264 mll3341 phnF # RNA - Cobalamin 83775 mlr1374 cfrX 83776 mlr1375 cobW 83777 mlr1377 cobN 83778 mlr1378 cobG 83779 mlr1379 cbiC 83780 mlr1380 cbiL 83781 mlr1381 cbiH 89159 mlr8225 cfrX 89160 mlr8227 btuD 89161 mlr8228 btuF 89162 mlr8229 btuC 88575 mll7468 bluB 87474 mll6123 null 83728 msl1310 cbtB 83727 mll1309 cbtA 83726 mll1308 cobU 83725 mll1306 btuR 86622 mll5101 ardX 86621 mll5100 frdX # RNA - mini-ykkC 86438 mlr4864 ykkc # RNA - FMN 88431 mll7281 ribH2 # RNA - TPP 85677 mll3867 thiB 85676 mll3865 thiP 85675 mll3864 thiQ 84072 mll1759 ykoF 84071 mll1758 thiX 84070 mll1757 thiZ 84069 mll1755 thiY 87191 mll5795 thiC 87190 mll5793 thiO 87189 msl5792 thiS 87188 mll5790 thiG 87187 mll5789 thiE 87186 mll5788 thiD # RNA - serC 85686 mll3876 serC 85685 mll3875 serA # RNA - speF 84987 mll2974 speF # RNA - Glycine 89597 mlr9201 dadA 83389 mlr0883 gcvT 83390 mlr0884 gcvH 83391 mlr0885 gcvP # RNA - SAM_alpha 85420 mlr3538 metX 85421 mlr3539 metW 87073 mll5651 metY # RNA - Trp_leader 84834 mlr2774 trpEG # RNA - ybhL 86035 mll4343 ybhL # TF - RhaR: mll5707 87118 mll5707 rhaR 87117 mll5706 rhaF 87116 mll5705 rhaG 87115 mll5704 rhaH 87114 mll5703 rhaJ 87113 mll5702 rhaM 87112 mll5701 rhaK 87119 mlr5708 rhaEW 87120 mlr5709 rhaI # TF - AglR: mlr5115 86632 mlr5115 aglR 86631 mll5113 aglE 86630 mll5112 aglF 86629 mll5110 aglG 86628 mll5109 aglA 86627 mll5107 aglK # TF - PckR: mlr5161 85642 mll3821 COG5480 85641 mll3819 pykA 85643 mlr3822 COG3931 85644 mlr3823 COG3492 85002 mlr2994 eda 88668 mlr7586 glgP 88669 mlr7587 glgB 88670 mlr7588 glgC 88671 mlr7589 glgA 88672 mlr7590 pgm 86009 mll4308 mdh 86008 mll4306 sucC 86007 mll4305 null 86006 mll4304 RL4437 86005 mll4303 sucD 86004 mll4302 null 86003 mll4301 sucA 86002 mll4300 sucB 87805 mll6516 zwf 87804 mll6514 pgl 87803 mll6512 edd 85590 mlr3754 fba 86617 mlr5096 pckA 83426 mll0929 glpX 85753 mll3969 pyc # TF - HrcA: mll4621 89719 msr9341 groS 89720 mlr9342 groL 87206 msl5812 groS 87205 mll5810 groL 84549 mlr2393 groS 84550 mlr2394 groL 89140 mll8202 groS 89139 mll8201 groL 84425 mll2233 groS 84424 mll2232 groL # TF - MntR: mll2499 84629 mll2499 mntR 84630 mlr2501 mntH # TF - MocR: mll4997 86539 mlr4998 mocD 86540 mlr4999 mocE 86541 mlr5000 mocF 86538 mll4997 mocR # TF - SmoR: mlr7217 88378 mlr7217 smoR 88377 mll7216 fruK 88376 mll7215 agaZ # TF - SoxR: mlr2720 84794 mlr2720 soxR 88850 mlr7819 PF03992 85099 mlr3125 PF07690 # TF - CueR: mll5312 86810 mlr5325 copA # TF - CadR-PbrR: mlr2476 84611 mll2475 cadA # TF - SMb21598: mlr1512 83881 mlr1512 SMb21598 83880 mll1511 COG0673 83879 mll1509 COG1082 # TF - SMb21706: mlr2242 84432 mlr2242 SMb21706 84433 mlr2244 SMb20634 84434 mlr2245 SMb20633 84435 mlr2246 SMb20632 84436 mlr2247 PF07944 # TF - SMc04260: mlr3320 85251 mlr3320 SMc04260 85250 mll3319 SMc04259 85249 mll3316 SMc04258 85248 mll3315 SMc04257 85247 mll3314 SMc04256 85246 mll3313 COG1082 85245 mll3311 COG0673 # TF - EutR: mlr7131 88304 mlr7131 EutR 88305 mlr7132 ehuA 88306 mlr7133 ehuB 88303 mll7129 doeX 88302 mll7128 doeC 88301 mll7127 doeD 88300 mll7125 COG604 (Qor) # TF - BioR: mlr7428 88542 mlr7428 bioR 88543 mlr7429 bioY # TF - IolR: mlr1005 83488 mll1004 iolK 83487 mll1003 iolL 83486 mll1002 iolM 83485 mll1001 hyi 83484 mll1000 iolG 83483 msl0999 null 83489 mlr1005 iolR 83490 mlr1006 iolE # TF - AfrR: mlr3045 85041 mlr3045 afrR 85042 mlr3046 afr 85043 mlr3047 ydiF 85044 mlr3048 crt 85045 mlr3049 aldh 85046 mlr3050 null 85047 mlr3052 null 85048 mlr3053 null 85049 mlr3054 null 85050 mlr3056 null 85051 mlr3057 fabG 85052 mlr3058 null 85053 mlr3059 null 85040 mll3044 PF06187 # TF - Mll1683: mll1683 84014 mll1682 mll1682 84013 mll1680 mll1680 84012 mll1679 mll1679 84011 mll1678 mll1678 # TF - PdxQ: mlr6174 87696 mll6378 COG3382 87695 mll6377 PF01810 87694 mll6376 PF00701 87520 mlr6176 pdxO2 87521 mlr6177 PF01810 # TF - SMb20039: mlr1139 83594 mll1137 COG697 # TF - Mll0059: mll0059 82740 mll0059 Mll0059 82741 msr0060 PF06568 # TF - PdxW: mlr1821 84115 mll1820 pdxO # TF - Mll2434: mll2434 84582 mlr2436 mviM 84583 mlr2437 iolE # TF - FnrN/FixK/AadR: mll6578, mlr6409, mll6632 87722 mlr6409 fnrN 88750 mlr7688 ccmI 88751 mlr7689 ccmE 88752 mlr7690 ccmF 88753 mlr7691 ccmH 87897 mll6632 fnrN 87728 mlr6415 ccoG 87729 mlr6416 ccoH 87730 mlr6417 ccoI 87731 msr6418 ccoS 87891 mll6626 ccoG 87890 mll6625 ccoH 87889 mll6624 ccoI 87888 msl6623 ccoS 87895 mll6630 ccoN 87894 mll6629 ccoO 87893 msl6627 ccoQ 87892 mll6628 ccoP # TF - FixJ: mll6607 87853 mll6578 fixK 87246 mll5857 nifA