Profile of regulator MsmR in Bifidobacteriaceae

Properties
Regulator family:	LacI
Regulation mode:
Biological process:	Carbohydrate metabolism
Effector:
Regulog:	MsmR - Bifidobacteriaceae

Member of regulog collections

By taxonomy - Bifidobacteriaceae
By TF family - LacI
By pathway - Carbohydrate metabolism

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Bifidobacterium longum subsp. infantis ATCC 15697
	Blon_0042	msmR	-162	5.7	TTAGTGAAACGTTTCGACGA
	Blon_0042	msmR	-149	5.5	TCGACGAAACGATTCGATAA
	Blon_0043	msmE	-196	6	TAATCGAAACGATTCGAAAG
	Blon_0043	msmE	-108	6.1	TCGTCGAAACGTTTCGAAAA
Bifidobacterium adolescentis ATCC 15703
	BAD_1584	msmR	-70	5.9	TAAGTGAAACGTTTCGACGA
	BAD_1584	msmR	-57	5.5	TCGACGAAACGATTCGATAA
	BAD_1585	msmE	-186	6.7	TAATCGAAACGTTTCAATGA
	BAD_1585	msmE	-78	6	TCATCGAAACGTTTCAATAC
Bifidobacterium angulatum DSM 20098
	BIFANG_01794	msmR	-132	5.9	TAAGTGAAACGTTTCGACGA
	BIFANG_01794	msmR	-119	5.2	TCGACGAAACGATTCGACAA
	BIFANG_01793	msmE	-168	5.5	AAATCGAAACGATTCGATAT
	BIFANG_01793	msmE	-85	7	TAATCGAAACGTTTCAATTA
Bifidobacterium dentium Bd1
	BDP_2166	msmR	-71	6.3	TTATTGAAACGTTTCGACGA
	BDP_2166	msmR	-58	5.7	TCGACGAAACGATTCGATTA
	BDP_2164	msmF	-242	6.5	TAATCGAAACGTTTCAACAA

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD