Profile of regulator T-box(Phe) in Lactobacillaceae

Properties
Regulator family:	RF00230
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Phe-tRNA
Regulog:	T-box(Phe) - Lactobacillaceae

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - T-box
By effector - Phe-tRNA
By pathway - Amino acid metabolism

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Oenococcus oeni PSU-1
	OEOE_0917	pheS	-243	85.8	TTAAAAATTTGTGGAAGATTAGTAGGCTGTGATGTTGCAAGCGAATCGGGATTGGTGGAAGCCGATAACAGTAAAAGCTGAATTTCACTTCCAATTATTCTAGTTAATAGCTGGCGGATGGCTCCGTTATAAGCTTTAAGAGTTAGAAAAGTTTTTTGTTTTCTATAAATTTGGGTGGTAACACGATAAATTCGTCCCTGGTGC
Lactobacillus reuteri JCM 1112
	LAR_1151	pheS	-246	95.6	ATTAAAAGCGATGATGAGAGCTAGTAGCTAAACGATCCTGTTAGAGAGTTGCAACCATGAGCTGAGAATTGCAATCAGTGATCTAAAGCGAATTTCACTTTCGGAGCTGATACGTAATGGTATTCCGGCCAATCACCGTTATTGATTACTAGAGTGTGTAGGATTTTCCCCTACAAACTAGGGTGGTACCGCGAAGCCTCGTCCCTATA
Lactobacillus helveticus DPC 4571
	lhv_1581	pheS	-247	96.8	GTTAATTACTGAGATCAAGACTAGTAACAGTTAATTATCTGAACAGAGAGTCTTCTTTGATAAGCTGAAAGAGAAGGTAGAATAGTTAATTGTGAATTTCATCTTGGGAGTAGAATCTAATCAATTCCGGTATTTCACCGTTAACGAAAACTTGAGTGTGGGCATAGAATGCCCAAACTAGGGTGGTACCGCGACGCTTCGTCCCTATT
Lactobacillus fermentum IFO 3956
	LAF_1289	pheS	-246	100.6	TAAAAAGACAGTGATGGAAACTAGTAACTGTCGCAAGTAGTTTCAGGGAGGTCGGGGTAGCAACTGGAACCCCAACCACTACTTTAGCAGCGAATTTCACTTCCGGAGTCGGTACTTGTACCCGGTTGATTACCGTTACCAATCAAAAAAGTGTTTGGCAATTGTCAAGAACTAGGGTGGTACCGCGAAGCCTCGTCCCTTTT
Lactobacillus salivarius subsp. salivarius UCC118
	LSL_0813	pheS	-280	107	TAAAGATGTAGATGGAAAAGAGTAAGATAAAGTAATATTTTAAGAGAGAAATTAGTTTTGGTGAGATAATTTCAATATTTTTTATCTGAAGTTCACTTCCGGAATCGCTATCGGAATACGATTTAAGTTGAAAGATAGAACGTTGATGCTACGTTAAAGGCATATTAGAGTGTTGTTGTACAATTTTGTATAACAAAACAAGGGTGGTACCGCGAGCCTCGTCCCTTTTGG
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
	LBUL_1383	pheS	-258	107.8	ATTAATTACTAAGAACAAGACTAGTAGCAAGTTCGGTCTTTGACAGGGAGGTTTCTTGGCAACTGAAAGGAAACCAAAGAGCGGCTTGCGAATTTCATCTTGCGAGTAGGATCTAATCAATTCCGGCTGCCACCGTTATCGGTATAGAGCGTAGGCCTTTTTGGGCCTAAACTAGGGTGGTACCGCGAAGCTTCGTCCCTTTT
Lactobacillus acidophilus NCFM
	LBA1519	pheS	-246	95.6	ATTAATTACTAAGATCAAGACTAGTAACGGTTAATTTCTAGACAGAGAATCTTCTTTAAAAAGCTGAAAGAGAAGATAGAATGATAATCGTGAATTTCATCTTGGGAGTAGAATCTAATCAATTCCGGTATTTCACCGTTATCGAAAACTTGAGTGTGGGCATATTTATGTTCAAACTAGGGTGGTACCGCGACGCTTCGTCCCTATT
Lactobacillus johnsonii NCC 533
	LJ1625	pheS	-245	101.5	ATTAAATGCGATGATTAAGATTAGTAGTGTGGATAGCTTTTTAGAGAGAGTTTTACTGGTGGAAGAAACTTAAGTTAGAAGCATGAATTTCATCTTAGGAGCAGAATCTAATCAATTCCGGTATTTCACCGTTATTCGAAAAGAGTGTGAACACGCACTTTATTTGTGCTAGTTCAAACTAGGGTGGTACCGCGAAGCTTCGTCCCTTTT
Lactobacillus plantarum WCFS1
	lp_1558	pheS	-280	94.3	TAAAAGCCTTGACGAGAAATAGTAGTTAGTTACGGCGTCGTAGGGACGGGTGTCACCGATTGAAAGCACCCTGGCGACCAAGATTGACGAATTCACTCTCTGAGCTGAAATTGGGCGTTTGTGTAAACAAATAATTTTCCGGTATCCCGACCGTTATGACGGGTAGTGAGTGTGCATAGTGACTACTATGCAAACAAGGGTGGTACCGCGATGACCTCGTCCCTTTTCA
Lactobacillus casei ATCC 334
	LSEI_1672	pheS	-298	69.3	CGTAAAAACGATGACGAAAGCCCAAACAGGCTGACGAGATAGGGAATGACGTTCATACGACTGCAAGACGTCTATCGCCAAAGTGTTTGTCTTCACTTTCTGAGTTGACTTTTGAAGTGGCAACACTTAGAAAGCTCCGGCCTAGCCGTTACCTTGTTGAGTGCATGGTTATTTCGTGACCATGAACAAGGGTGGTACCGCGATGCTTCGTCCCTTTT
Lactobacillus brevis ATCC 367
	LVIS_1010	pheS	-291	83	GTTAAAAACGATGATAGAAAAGTAGTAACCGGAACGGTTTGTCAGGAAGAGTCTGCCTAGACTGTGAGCAGACTTCAAAGCGATAGGTGAATTCAGTTCTTGAGTTGTCGCCAGGACGCAACTTAGTTGTTGTGAAAAGGTGTTCCGGTACGTGACCGTTATCACGACTGAGTGTGGTTGGGGATGAAATCCCTAACTGAATCAGGGTGGTACCGCGATGCTTCGTCCCTAGT
Lactobacillus sakei subsp. sakei 23K
	LSA1376	pheS	-242	110.5	TTTATAGACAAAGATGAAAAAGAGTAACCTAACAACCAACTTTCAGGGAGAATAATCATAGACTGTAAGTTATTCAGTTGAGTTTAGGTGAAGTTCACTTTCAGAGTTGACCGTTGAGTCCGGTATTGCCCGTTACGCAAACTTGAGTGTATGACTAGGTCATAAACTAGGGTGGTACCGCGAAGCTTCGTCCCTTTT
Pediococcus pentosaceus ATCC 25745
	PEPE_0721	pheS	-207	87.8	AAAGCTCGAAGAGTAGTAGCTGATTTAAATTATCAGACAGAGAAGGAATCGTTAGGTTGAGAGATTCCGATGATGGTTTCAGTGAATTCGCTTCGATTTAAAAATGGGCAGGCCACCCGTATCTGGCTGACCAAGTGTGCATTGAGTTGCAAACAAGGGTGGTACCGCGTTAAAAAACGTCCCTTTCTA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
	LEUM_0447	pheS	-265	105.8	AGCATACGATGAATGACCCAGTAATTGTATTGATGCCCTCAGCGAACGGTGATTAGTGAAAGACCGTGGCTAAGATACGGTGAAATTCAGTCAGGAGTATTGGTTTAATCGCCAACGGTTGTCTCCGTTATGGACACCAAAGCTGGATTTATCCAGGAATTTGGGTGGTACCACGGTATTTAACGTCCCATGTAG
Lactobacillus rhamnosus GG
	LGG_01718	pheS	-293	60.4	TGTAAAAACAATGACGAAAGCCCAAACAGGCTGGTAAATCAGGGAATGACGTTCACGAGACTGCAAGACGTCTGTTACCAAAATGTTTGTCTTCACTTTCTGAGTTGACTTTTGAGGTGGCAACACTTAGAAAGCTCCGGCCTGGCCGTTACCTTGTTGAGTGCATGAGGTTTTTTAATCATGAACAAGGGTGGTACCGCGATGCTTCGTCCCTTTT

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Profile of regulator T-box(Phe) in Lactobacillaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --