Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator T-box(Cys) in Clostridiaceae

Properties
Regulator family: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Cys-tRNA
Regulog: T-box(Cys) - Clostridiaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium kluyveri DSM 555
CKL_1001 ubiG -370 84 TAATTGCGATGATGAGAAGAGTAAATTACACAAAACTACAAGAGAGAATTCCCCTTGGGTGTAAGGGAGTTTTGGTGGGAGGTAATTGAAGTGCATCTTTGAGCACTGAGTTGAATCTTAGTAGATTTCAGCGTGTACGTACGTTAAAACGTTGAGGTATGATTGTACCAATAAAGAGTTTTCACATGTAAACTTGTATTTATATAGTTTTTATAAAGTTTATATGGGATAAACAGAGTGGAACCGCGGAAGTAACCTTCTGCCTCTGTATA
CKL_3413 cysK -330 115.1 CAGAAATACTTTGAAAAAGAAAAGTAGTTTAAATAAAGTTTCACAGAGAGGAAGCTGTAGGCTGAAAGGCTTCTAAATGGAATTTAAATGAAGTGCTCTTTGGAGTTATTGGCCGAACTGATAGTAGGTTGTATCGGGTTCACCCGTTATAGTGATAGAACATAGTGTTGTGTTTGATGAGTGAGGTCAAAAGATCTAAAAAGAGTGGAACCACGGAGTAGTACTTCGTCTCTATA
Clostridium sp. SS2/1
CLOSS21_00208 cysE -225 102 TAAATGCAATGAACAGAATTAGTACAGACAAGTTGGAACTGTCAGAGAGAAGCTGCCATCGGCTGGAAGCGGCTTTGAGGGAAGATGTCTGGAATGCATCTGGGAGCAGACAAGATGAATAAAGTAGTTTTGTACGTTGCCGGCGTTAACGGATTCGAGTGAAAGTATCCTGATCAAGTGATATTAGTCAGATATATAATAAGAAGATCAGGAACTTTTAAAAGAGTGGAACCGCGGATATACTCCGTCTCTTTATT
Clostridium phytofermentans ISDg
null cysE -370 114.4 GTGAAAAGCATTGATCGGAAAGAGTAGCTTATTCTGAAATCACAGAGAGGGAATGTCACCGGCTGAAAGCATTCTTGAATTTCTTATAAGCGAAGTGCATCCGTGAGCTGGTTAGGCGAAGAGAGTAGCTTAACTCGGTTACAGCCGTTACCTGTTTTGAGCTCGCTATTATGCGAATTTGAGTGGAACCGCGGATTACTTCGTCTCTTAG
Clostridium tetani E88
CTC00351 cysE -282 92.1 AAAATACATTGAAAGAGGAAAGTAATATATATGGAATTTTTAGAGAGAAAATCCCGTCGGCTGTAAGGATTTTTAAAGGAAGTATATGTGAAGTGCCCTCTGGAGTATTGCACCGAAATCAGTAGGCTGCAACGGTTTTACCCGTTATAGTAATAAAGCATTATAGTGCTTGAACTTTATTCTAAGCCTAATTTATAGGTAGAGTGGAATACGAAAGATACAACTTCGTCTCTATTTT
Clostridium acetobutylicum ATCC 824
CAC3325 tcyA -327 87.4 GATTTGCTAGGATAAGAACCAGTAACATAGCGGAAACTTACAGAGAAAAATCTCCAAGGCTGAAAGGGATTTTAAGTATGAACTATGTGAATGCATCTTTGAGCACTGCTCCGAACTTTGTAGGCAGCAGCGGATACGCACGTTAAAGCGTTATGGTATTTTTTATACCTTAAAACGAGATACCTTAACTTTACGTTTTGGTAATTAGAGTGGTACCGTGGAATTCAACTTCTGCCTCTAACTA
CAC0687 cysE -269 89 GAAATGCTTTGATAAAGTAAAGTAGTATAGTGAAAGTTTTAAGAGAGGGAATGTTAGCTGAAAAATTCCTAAATGGAAGCTGTATGAAGTGCGCTTTGGAGTACATCATTTGAAGTATGAGTAGGATGATGCGGTAATACCCGTTATAGTATGGAGCATTATATGTGCTTTTGTTTTAGAGTGGAATAGCGAGTAAGTATGACTTCGTCTCTAGTGA
CAC0929 ubiG -377 98.1 TAAATACTGTGATAAGAAATAGTAGCATAAATAAAACTTAACAGAGAGATCTCCCTGGCTGAAAGAGATTAAGATTAAGTTTATGCGAATGCATCTTGGAGTACTGCCTCGAAATGTGAAATTAATATATACTAAAATTTTTATAGTAGACGGCAGCGGGTACGCCCGATTAAAGCGTTATGGTATGTTAGTACCTAAGTTATGAGTTGTCATATTAGTTTTTATGTGATAATTAGAGTGGAACCGCGGAGTAAACTTCTGCCTCTATATT
Clostridium botulinum A str. ATCC 3502
CBO0727 ubiG -407 98.6 GATAAATGCTATGATAAGAAATAGTAACATAAGGTAATCTATTAGAGAGAAATCCTCTTGGCTGAAAGGGATTTTTAGTGTAACTTATGTGAATGCATCTTTGAGCACTGTCTCGAAATATAGTAGACGACAGCGTGTACGCCCGTTAAAGCGTTGAGGTATTATTGTACCAAAATGAGATGTTATTGTATATTTACTGCAATAATAATTAGAGTGGAATCGCGGAAGTTAACTTCTGCCTCTAAA
CBO0205 cysK -297 121.7 TAAAAACGTTGAAAAAGGAAAGTAGCATAATTAATCTTTTCAGAGAGGAAATTGTTTTGCTGAAAAATTTCTAAAGAAGATTTATGTGAAGTGCCCTTTGGAGTTGTGTACCGAATAAAGTAGGCTACATCGGGTTCACCCGTTATAGTGATAGGGTATAAATTTATTAAGTACCTGATAAAGTGAGATTTTAATATCTAACTAGAGTGGAACCACGGAGAATATACTTCGTCTCTATATT
CBO0235 cysP1 -395 87.3 ATTAAAAGCTATGAATAGAGAAAGTACGTTAATAGAAACTTTCAGAGAGAAGTCTCCCCTGGCTGAAAGAGACTTTAAGTGAAAATTATCAGAAGTGCCTCTAGGAGCTCTTTTTCGAATTAAGTAGATTTTAGCGTGGACGCCCGTTATAGCGTTAAGGTATGTTTGTGCCTGATATTTTTGAGTTATATGCATGTTTTTTATTTGCATATAAACAGAGTGGAACCGCGGAATATAACTTCTGCCTCTGTA
Clostridium novyi NT
NT01CX_1391 cysE -305 75.3 GAAATACAGTGAAGAAGGAAAGTAATATAAATTGTGCATTCAGAGAGGAAATCATATGCTGTGAGATTTCTATGTAAGATTTATGTGAAGTGCCCTTTGGAGTTTTGCACCGAATAAAGTAGGCTGCAACGGGATTACCCGTTATAGTAATAGAGCATAAAATTTAAATTATATTTTAAATGACGGTGCTTGAA
Clostridium perfringens ATCC 13124
CPF_1223 cysP1 -331 67.6 GAAAAGCTGTGATTAGAAAAGTAGAATTAATTTCTTTATTCAGAGAGAGTCTTCTAGGCTGAAAAAGACTTTAAAGAATTTTTTCATGAGTGCATCTATGAGCTTGTTTCCAGAAATAATCTTAGGTTAGAGTAGGGGAATGCGGGTATGCCCGTTATAGCAGAGTGGTATATTTGTACCTAAAGAGATTTTGTAGTTTAATTTAGCTTACTACTTAAAATCAGAGTGGAACCGTGGAATTTTACTTCTGCCTCTGTATA
CPF_1191 cysP2 -376 104.2 TAAATGCGTTGAAGAGGGAAAGTAAATATTATAAGTTACTACAGAGAGAGGTTAGTTTGCTGAGATAACCTGTAATGAGTATTATTGAAGTGCCCCTTGGAGCTTAAGTGCCGAATTAAGTAGGTGTTTATGGGAACTCCCATTATAGAGTTAGGGTATGAATGTACCTAAATAGAGATGGATATTATATATCTAATCAGAGTGGAACCGTGGAAGTATAGTCTTCTGCCTCTGTAAT
CPF_1529 cysK -281 109.7 GATAAATGTTGTGATAAAGTAAAGTATTATAAGGATAGGTCACAGAGAGAAAGTGGGGCTGGAAATCTTTCACCAAAGCTTTATAAGAAGTGCGCTTTTGAACAGGAATTTCGAAAAGTTATAAGTAGAAATTTTCGAGTATCACCCGTTAACGTGATAGAGTATTTATAGTACTTGATTAAGTGAGGTCTTTACCTAATTAGAGTGGAACCACGGAGTAAAAAGCTTCGTCTCTAAA
CPF_0168 ubiG -380 131.4 TAAATGCATTGAAAAAGTAAAGTAGCATTTTGGAAAATCACAGAGAGGAAAATGATGGTGAGAGTTTTCTATTTAGAAGAAATGTGAAGTGCACTTTGGAGCAGAAATCCGAAATTTTTAGTAGGGTTCTCCGGGATCACCCGTTATAGTGATTAGGCATGTTAGTGCTAAATTTTGAGTGCAGGTATATCTTTTATATCTGAATTAGAGTGGAACCGCGAGTTACCTCGTCTCTATAGA
Clostridium beijerincki NCIMB 8052
Cbei_0577 cysK -267 47.8 TTAAAAAATGGAGCGATAGTATAGCCATTGATTTTTTGATATATTTTTTAGTATGATTTTCCGGGATCACCCGTTATAGTGATATGATATCTTAAGTATCAAAATTGAGAGGGATTAGTTATTTAATCCAATTAGAGTGGAACCGCGAAATTTACTTCGTCTCTATAAT
Clostridium sp. OhILAs
Clos_0468 cysE -315 107.5 AAAAAGCGAAGAACAGAAGAAGTAAGTTCATACGAATTGCAAGAGATAAGCTGCCATTGGCTGAAAGCAGCTTTCAATAGACGGTGGACTGAAATGCATCTGGGAGCTATGGCTTGAAATTTTAGTAGGGCTAATCGGGTGGTTCCGTTAAAGACTTGGAGTGGAATGCTTTTTATGGTTCAACCAGAGTGGGACCGCGGATTAAATACAACCGCCTCTGATCT
Clostridium scindens ATCC 35704
CLOSCI_01225 cysE -305 102 AAAAGACGCTGAACGGAAAGAGTAGCAGGCTATGGAACTGAAAGAGAGAAACTGTCACCGGCTGAAAGCAGTTTTAAGGGAAGTATCTGTGAAGTGCATCCGGGAGTCGATTTGGCGAACGCGTGCGGCAAGTAGCCAGGTACGGGATTACACACGTTACGTGTACCAAGGTGGAGGATGTTTTTGTGCACGAATGTCCTCTATAAGAGTGGAACCGCGGATATACTCCGTCTCTTGCAT
Clostridium nexile DSM 1787
CLONEX_00247 cysE -311 110.1 GAGAAAGACTTAGAACGAAAAGAGTAGTATATTTGGAACTGACAGAGAGAGATTGCCATCGGCTGAAAGCAATTTTGAGGAAAGAATATATGAAGTGCATTCGGGAGTTGGTTTGGCGAACAGACAGTAGCCGAATTCGGGCAGCATACGTTACATGCATCAAGTGAAGGAAGGAGATTCCTTTATTAGAGTGGAACCGCGGATTGAACTTCGTCTCTAGA
Clostridium butyricum 5521
CBY_4054 cysK -477 117.9 TAAAAACTATGAAAAAGGAAAGTAGCATATTGGAACGTTAACAGAGAGGAAAGGAAGCTGAGAACTTTCTATCAGGAAACTATGTGAAGTGCCCTTTGGAGTTGAAATCTGAATAGTAGTAAGATTCTCCGGGTTCACCCGTTATAGTGATAGGCATGATTAGTGCTCGATTTGAGGTGGGATTATATTAATCCAATTAGAGTGGGACCGCGAAGTAACTTCGTCTCTATAAG
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