Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator PhnF in Rhodobacterales

Properties
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Phosphonate utilization
Effector:
Regulog: PhnF - Rhodobacterales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Paracoccus denitrificans PD1222
Pden_4782 phnG -53 5.6 TTGTCTAGTTGTATAGAAAA
Pden_4782 phnG -45 5.8 TTGTATAGAAAACTAGACAA
Pden_4783 phnF -85 5.4 TTTTCTATACAACTAGACAA
Pden_4783 phnF -93 5.9 TTGTCTAGTTTTCTATACAA
Jannaschia sp. CCS1
Jann_2855 phnN -29 5.3 TTGTATAATTAAATGGACAA
Jann_2856 phnF -85 5.3 TTGTCCATTTAATTATACAA
Rhodobacterales bacterium HTCC2654
RB2654_09759 phnF -75 5 TTGTCTACGCTACTATACAA
RB2654_09754 phnG -37 5.1 TTGTATAGTAGCGTAGACAA
Loktanella vestfoldensis SKA53
SKA53_06742 phnF -71 4.8 TTTACTATACAACTAGACAA
SKA53_06737 phnG -37 5.1 TTGTCTAGTTGTATAGTAAA
Oceanicola batsensis HTCC2597
OB2597_05575 phnG -37 5.9 TTGTATAGGTAAATAGACAA
OB2597_05580 phnF -79 6 TTGTCTATTTACCTATACAA
Roseovarius nubinhibens ISM
ISM_06260 phnG -39 5.6 TTGTATAATAACATAGACAA
ISM_06265 phnF -94 5.5 TTGTCTATGTTATTATACAA
Roseovarius sp. 217
ROS217_04235 phnG -49 5.5 TTGTATAGTGATATCGACAA
ROS217_04230 phnF -85 5.4 TTGTCGATATCACTATACAA
Sulfitobacter sp. EE-36
EE36_08873 phnG -37 6.2 TTGTCTAGTTGTATAGACAA
EE36_08868 phnF -76 6 TTGTCTATACAACTAGACAA
Silicibacter TM1040
TM1040_3703 phnG -53 4.5 TTGTCTAGTTGTATAGGACA
Silicibacter pomeroyi DSS-3
SPO0468 phnG -47 5.1 TTGTCTAGTTGTATAGTGAA
SPO0467 phnF -76 4.8 TTCACTATACAACTAGACAA
Roseobacter sp. MED193
MED193_17604 phnG -52 5.1 TTGTCTAGTTGTATAGAACA
MED193_17599 phnF -76 4.8 TGTTCTATACAACTAGACAA
Export
Regulatory Sites [ FASTA format ] DOWNLOAD