Profile of regulator S15 in Lactobacillaceae

Properties
Regulator family:	RF00114
Regulation mode:
Biological process:	Ribosome biogenesis
Effector:
Regulog:	S15 - Lactobacillaceae

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - S15
By pathway - Ribosome biogenesis

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Oenococcus oeni PSU-1
	OEOE_1283	rpsO	-62	22.8	CTTTTCGCGAACCTACCTTTTACGAATCGCTCGGTAATTGGAAATTTTGAGGAGGTAAAATCATGGCTTTAACTCAAGAAGCAAAGAACCAGATTATTAAAGAATATGCTCGCCATAATGG
Lactobacillus reuteri JCM 1112
	LAR_0625	rpsO	-75	15.9	TTCTCAGTTTAACGATCCTCACCGACGTTATACTTAGATCTTAGGCGCATTAATATTGAAAGGTGGGAAAATAGCATGGCTATTTCAAAAGAACGTAAAGATCAAATTATTAAGGAATTCGCAACTCACGAAGG
Lactobacillus salivarius subsp. salivarius UCC118
	LSL_0638	rpsO	-75	14.6	CTTTTTACTGAGTTTGGCGGGTCACCGTCGTCTTATCTCGGATTAAGGCAACTATTATGAAAGGTGGGAAATACATTGGCTATTTCACAAGAAAAGAAAAACGAAATTATGAAGAAGTATGCTCGTCATGAAGG
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
	LBUL_0706	rpsO	-82	14.1	GTGAACCCCGGACGTTGTCTTTACGTTTCACCTAACGGCTGACGCTGTCCGGGGCAATTTTTCAAAAGAAAGGTGCAGAAACATGGCAGTTTCAAAAGAAAGAAAGAACGAAATCATCAAGGAATACGCAACTCACGAAGG
Lactobacillus johnsonii NCC 533
	LJ1006	rpsO	-73	23.2	ATTGACGCTGTTTTCCCGCCGCCGACGGTTAACGTTGTTAATGGCAATTATTTAAAAGAGAGGTATTTTTCTAATGGCTATTTCAAAAGAAAAGAAAGATGAATTAATCAAAGAATACGCACGTCACGATGG
Lactobacillus brevis ATCC 367
	LVIS_1392	rpsO	-53	13.9	CACCGCCGGCTTACTCAGTTCGGGGCACTTATTTGAAAGGTGGTACTTTTACCATGGCTATTAGTCAAGCAAAGAAGAACGAAATCATCAAGCAATACGCTCGTCACGAA
Lactobacillus sakei subsp. sakei 23K
	LSA1066	rpsO	-70	18.7	TCTGTTTAGCGACGTTCACCCGACGCTATTCGTTGTTTCGGGTAATATAACTGAAGGGTGGAAATTAGCAATGGCTATTTCACAAGCAAGAAAAAACGAAATCATCAATGAATATGCACGTCACGAA
Pediococcus pentosaceus ATCC 25745
	PEPE_1146	rpsO	-54	25.6	ATCTGCCGACGATTTACTCAGTCTTGGGGAATTTAAAGAATGAGGTGTTTTAACATGGCAATTTCACAAGAAAAGAAAAACGAAATTATTGCAAAGTATGCTCGTCACGAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
	LEUM_1582	rpsO	-65	17	TTGTTGAGCGGCTCACCATCGCTTTACGCAGTCTCTGGCGACATTTTAGAAAGGTGGATATAAATATGGCACTTACACAAGAACGTAAGAACGAAATCATCAAGGCATACGCCCGCCACGAAGG

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD