Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Geobacillus kaustophilus HTA426

Properties
Regulator type: Transcription factor
TF locus tag: GK1328
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Bacillales
Statistics of regulated genes:
- Genes 20
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 206 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -419
Score: 5.1
Sequence: ACAAACATAGGTTCGA
Position: -390
Score: 4.6
Sequence: ACAAACAAATGTTCCT
Position: -357
Score: 4
Sequence: GCGAACAAACATTCTA
Locus tag: GK1330
Name: yneB
Funciton: Site-specific recombinase, DNA invertase
Locus tag: GK1331
Name: ynzC
Funciton: Hypothetical protein
Locus tag: GK1332
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
Locus tag: GK1333
Name: yneE
Funciton: Hypothetical protein
Locus tag: GK1334
Name: yneF
Funciton: Hypothetical protein
GK1330
yneB
Site-specific recombinase, DNA invertase
GK1331
ynzC
Hypothetical protein
GK1332
tkt
Transketolase (EC 2.2.1.1)
GK1333
yneE
Hypothetical protein
GK1334
yneF
Hypothetical protein
Position: -39
Score: 4.4
Sequence: AAGAACACATGTTCCT
Locus tag: GK0489
Name: xkdA
Funciton: Phage-like element PBSX protein xkdA
GK0489
xkdA
Phage-like element PBSX protein xkdA
Position: -85
Score: 4.8
Sequence: ACGAATATGAGTTCGC
Locus tag: GK3086
Name: uvrB
Funciton: Excinuclease ABC subunit B
Locus tag: GK3085
Name: uvrA
Funciton: Excinuclease ABC subunit A
GK3086
uvrB
Excinuclease ABC subunit B
GK3085
uvrA
Excinuclease ABC subunit A
Position: -105
Score: 3.9
Sequence: CAGAACGGTTGTTCTC
Locus tag: GK2527
Name: sda
Funciton: Sporulation inhibitor sda
GK2527
sda
Sporulation inhibitor sda
Position: -85
Score: 4.4
Sequence: ACGAATGGACGTTCGT
Locus tag: GK1295
Name: recA
Funciton: Recombination protein A
GK1295
recA
Recombination protein A
Position: -40
Score: 4.1
Sequence: AGAAACAGGTGTTCTT
Locus tag: GK1751
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: GK1750
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
GK1751
parE
Topoisomerase IV subunit B (EC 5.99.1.-)
GK1750
parC
Topoisomerase IV subunit A (EC 5.99.1.-)
Position: -136
Score: 4.5
Sequence: TAGAATGTTTGTTCGC
Position: -103
Score: 4.9
Sequence: AGGAACATTTGTTTGT
Position: -74
Score: 5.1
Sequence: TCGAACCTATGTTTGT
Locus tag: GK1328
Name: lexA
Funciton: SOS-response transcriptional repressor
GK1328
lexA
SOS-response transcriptional repressor
Position: -55
Score: 4.1
Sequence: GCGAACATACGTGCTA
Locus tag: GK0681
Name: addB
Funciton: ATP-dependent deoxyribonuclease (subunit B)
Locus tag: GK0682
Name: addA
Funciton: ATP-dependent deoxyribonuclease (subunit A)
Locus tag: GK0683
Name: sbcD
Funciton: DNA repair exonuclease subunit D
Locus tag: GK0684
Name: sbcC
Funciton: DNA repair exonuclease subunit C
GK0681
addB
ATP-dependent deoxyribonuclease (subunit B)
GK0682
addA
ATP-dependent deoxyribonuclease (subunit A)
GK0683
sbcD
DNA repair exonuclease subunit D
GK0684
sbcC
DNA repair exonuclease subunit C
Position: -31
Score: 4.8
Sequence: TAGAACATATGTTTTG
Locus tag: GK0275
Name: pcrA
Funciton: ATP-dependent DNA helicase
Locus tag: GK0276
Name: ligA
Funciton: NAD-dependent DNA ligase
Locus tag: GK0277
Name: yerH
Funciton: Putative lipoprotein
GK0275
pcrA
ATP-dependent DNA helicase
GK0276
ligA
NAD-dependent DNA ligase
GK0277
yerH
Putative lipoprotein
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