Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of XosR in Bifidobacterium dentium Bd1

Properties
Regulator type: Transcription factor
TF locus tag: BDP_0563
Regulator family: LacI
Regulation mode:
Biological process: Xylooligosacharides utilization
Effector:
Regulog: XosR - Bifidobacteriaceae
Statistics of regulated genes:
- Genes 5
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -79
Score: 5.7
Sequence: AATCCGAAAGTTTCGAAAT
Position: -56
Score: 5.7
Sequence: AATTCGAAACTTTCGCTCT
Locus tag: BDP_0563
Name: xosR
Funciton: Transcriptional regulator of xylooligosacharides utilization, LacI family
xosR
Transcriptional regulator of xylooligosacharides utilization, LacI family

Position: -329
Score: 5.7
Sequence: AGAGCGAAAGTTTCGAATT
Position: -306
Score: 5.7
Sequence: ATTTCGAAACTTTCGGATT
Position: -65
Score: 5.3
Sequence: CTTTCGAAGCTTTCGTTCT
Locus tag: BDP_0565
Name: xosA
Funciton: Xylooligosacharides ABC transporter, substrate binding protein
Locus tag: BDP_0566
Name: xosB
Funciton: Xylooligosacharides ABC transporter, permease protein 2
Locus tag: BDP_0567
Name: xosC
Funciton: Xylooligosacharides ABC transporter, permease protein 2
Locus tag: BDP_0568
Name: xynB
Funciton: Beta-xylosidase (EC 3.2.1.37)
xosA
Xylooligosacharides ABC transporter, substrate binding protein
xosB
Xylooligosacharides ABC transporter, permease protein 2
xosC
Xylooligosacharides ABC transporter, permease protein 2
xynB
Beta-xylosidase (EC 3.2.1.37)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD