Regulon of PsrA in Shewanella baltica OS155

Properties
Regulator type:	Transcription factor
TF locus tag:	Sbal_2245
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid degradation
Effector:	Oleate
Regulog:	PsrA - Shewanellaceae
Statistics of regulated genes:
- Genes	26
- Operons	17
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 295 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - PsrA
By TF family - TetR
By effector - Oleate
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -79 Score: 6.1 Sequence: AATTAAACAGCTGTTTGAAT Locus tag: Sbal_3582 Name: echH Funciton: enoyl-CoA hydratase/isomerase family protein
	Sbal_3582	echH	enoyl-CoA hydratase/isomerase family protein
Position: -330 Score: 5.7 Sequence: ATTTAAATAAGCGTTTAAAT Locus tag: Sbal_2519 Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit Locus tag: Sbal_2518 Name: sdhD Funciton: succinate dehydrogenase subunit D Locus tag: Sbal_2517 Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit Locus tag: Sbal_2516 Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein
	Sbal_2519	sdhC	succinate dehydrogenase, cytochrome b556 subunit
	Sbal_2518	sdhD	succinate dehydrogenase subunit D
	Sbal_2517	sdhA	succinate dehydrogenase, flavoprotein subunit
	Sbal_2516	sdhB	succinate dehydrogenase, iron-sulfur protein
Position: -121 Score: 5.4 Sequence: ATGCAAACAGGCGTTTGACT Locus tag: Sbal_2847 Name: etfB Funciton: electron transfer flavoprotein, beta subunit Locus tag: Sbal_2846 Name: etfA Funciton: electron transfer flavoprotein, alpha subunit
	Sbal_2847	etfB	electron transfer flavoprotein, beta subunit
	Sbal_2846	etfA	electron transfer flavoprotein, alpha subunit
Position: -42 Score: 5.4 Sequence: ATTCGAACACACGTTTAATT Locus tag: Sbal_0657 Name: Sbal_0657 Funciton: hypothetical protein
	Sbal_0657	Sbal_0657	hypothetical protein
Position: -168 Score: 5.4 Sequence: AAACAAACAGGTGTTTAAAA Locus tag: Sbal_2761 Name: fadI Funciton: fatty oxidation complex, beta subunit Locus tag: Sbal_2760 Name: fadJ Funciton: fatty oxidation complex, alpha subunit
	Sbal_2761	fadI	fatty oxidation complex, beta subunit
	Sbal_2760	fadJ	fatty oxidation complex, alpha subunit
Position: -155 Score: 5.9 Sequence: ATTAAAACGTGTGTTTAATT Locus tag: Sbal_3483 Name: SO0881 Funciton: conserved hypothetical protein Locus tag: Sbal_3482 Name: SO0882 Funciton: oxidoreductase, GMC family
	Sbal_3483	SO0881	conserved hypothetical protein
	Sbal_3482	SO0882	oxidoreductase, GMC family
Position: -41 Score: 6.1 Sequence: ATTAAAACAACTGTTTTAAT Locus tag: Sbal_2077 Name: acdH Funciton: acyl-CoA dehydrogenase family protein
	Sbal_2077	acdH	acyl-CoA dehydrogenase family protein
Position: -156 Score: 5.9 Sequence: ATTTAAACAATTGTTTGAAA Locus tag: Sbal_2306 Name: fadE2 Funciton: oxidoreductase, acyl-CoA dehydrogenase family
	Sbal_2306	fadE2	oxidoreductase, acyl-CoA dehydrogenase family
Position: -86 Score: 4.5 Sequence: TTTCATTCATTTGTTTGAAA Position: -73 Score: 4.5 Sequence: TTTGAAACATGCGTTTATCA Locus tag: Sbal_2694 Name: SO2935 Funciton: oxidoreductase, short-chain dehydrogenase/reductase family
	Sbal_2694	SO2935	oxidoreductase, short-chain dehydrogenase/reductase family
Position: -66 Score: 5.4 Sequence: ATCTAAACACCTGTTTAACT Locus tag: Sbal_0956 Name: fadD2 Funciton: long-chain-fatty-acid--CoA ligase
	Sbal_0956	fadD2	long-chain-fatty-acid--CoA ligase
Position: -515 Score: 5.9 Sequence: AATAAAACGGTCGTTTAAAT Locus tag: Sbal_1316 Name: aceB Funciton: malate synthase A Locus tag: Sbal_1317 Name: aceA Funciton: isocitrate lyase
	Sbal_1316	aceB	malate synthase A
	Sbal_1317	aceA	isocitrate lyase
Position: -137 Score: 5.4 Sequence: ATTAAAACGCTCGTATGATT Locus tag: Sbal_1864 Name: fadD1 Funciton: long-chain-fatty-acid--CoA ligase
	Sbal_1864	fadD1	long-chain-fatty-acid--CoA ligase
Position: -70 Score: 5.4 Sequence: AATAAAACGCCCGTTTACAA Locus tag: Sbal_0283 Name: etfD Funciton: electron-transferring-flavoprotein dehydrogenase
	Sbal_0283	etfD	electron-transferring-flavoprotein dehydrogenase
Position: -162 Score: 6.1 Sequence: AATTAAACAGTCGTTTAAAT Locus tag: Sbal_0021 Name: fadB Funciton: fatty oxidation complex, alpha subunit Locus tag: Sbal_0020 Name: fadA Funciton: fatty oxidation complex, beta subunit
	Sbal_0021	fadB	fatty oxidation complex, alpha subunit
	Sbal_0020	fadA	fatty oxidation complex, beta subunit
Position: -105 Score: 5.7 Sequence: ATTTAAACGCTTATTTAAAT Locus tag: Sbal_2520 Name: gltA Funciton: citrate synthase
	Sbal_2520	gltA	citrate synthase
Position: -31 Score: 5 Sequence: TTTAAATCACTTGTTTTAAA Position: -18 Score: 5.4 Sequence: TTTTAAAAGGATGTTTGAAT Locus tag: Sbal_2056 Name: fadH Funciton: NADP-dependent 2,4-dienoyl-CoA reductase
	Sbal_2056	fadH	NADP-dependent 2,4-dienoyl-CoA reductase
Position: -38 Score: 5.9 Sequence: ATTTAAACGAGTGTTTTAAA Locus tag: Sbal_2245 Name: psrA Funciton: fatty acid degradation transcriptional regulator, TetR family Locus tag: Sbal_2244 Name: fadE1 Funciton: oxidoreductase, acyl-CoA dehydrogenase family
	Sbal_2245	psrA	fatty acid degradation transcriptional regulator, TetR family
	Sbal_2244	fadE1	oxidoreductase, acyl-CoA dehydrogenase family

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of PsrA in Shewanella baltica OS155

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --