Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Bamb_6386 in Burkholderia phymatum STM815

Properties
Regulator type: Transcription factor
TF locus tag: Bphy_6987, Bphy_3552
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Regulog: Bamb_6386 - Burkholderia
Statistics of regulated genes:
- Genes 8
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -90
Score: 10.3
Sequence: TCTTGGTACA-(14)-TCCTGGTGCT
Locus tag: Bphy_6988
Name: COG1917
Funciton: Uncharacterized conserved protein, contains double-stranded beta-helix domain
Locus tag: Bphy_6989
Name: COG2128
Funciton: Uncharacterized conserved protein
COG1917
Uncharacterized conserved protein, contains double-stranded beta-helix domain
COG2128
Uncharacterized conserved protein

Position: -175
Score: 6.9
Sequence: CGATAGTACA-(14)-TCTTGGGTCT
Locus tag: Bphy_3551
Name: PF01966
Funciton: Metal-dependent phosphohydrolase, HD subdomain
Locus tag: Bphy_3550
Name: COG1028
Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PF01966
Metal-dependent phosphohydrolase, HD subdomain
COG1028
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Position: -176
Score: 6.7
Sequence: CGATAGTACA-(14)-TCTTGGGCCT
Position: -114
Score: 5.8
Sequence: CCCAGGTGCA-(14)-TTCCGGCGCG
Locus tag: Bphy_6986
Name: PF01966
Funciton: Metal-dependent phosphohydrolase, HD subdomain
Locus tag: Bphy_6985
Name: COG1028
Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PF01966
Metal-dependent phosphohydrolase, HD subdomain
COG1028
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Position: -89
Score: 10.3
Sequence: TCTTGGTACA-(14)-TCCTGGTGCT
Locus tag: Bphy_3553
Name: COG1917
Funciton: Uncharacterized conserved protein, contains double-stranded beta-helix domain
Locus tag: Bphy_3554
Name: COG2128
Funciton: Uncharacterized conserved protein
COG1917
Uncharacterized conserved protein, contains double-stranded beta-helix domain
COG2128
Uncharacterized conserved protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD