Regulon of SdaR in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type:	Transcription factor
TF locus tag:	PSPTOA0035
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucarate utilization; Galactarate utilization
Effector:
Regulog:	SdaR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By TF family - GntR/Others
By pathway - Glucarate utilization
By pathway - Galactarate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -36 Score: 5.5 Sequence: ATGTTGTCAGACAACCT Locus tag: PSPTO_B0042 Name: COG579 Funciton: 2-hydroxyglutarate dehydrogenase Locus tag: PSPTO_B0043 Name: sdaP Funciton: Predicted glucarate/galactarate transporter, MFS superfamily
	PSPTO_B0042	COG579	2-hydroxyglutarate dehydrogenase
	PSPTO_B0043	sdaP	Predicted glucarate/galactarate transporter, MFS superfamily
Position: -37 Score: 5.9 Sequence: AGGTTGTCAGACAACCT Locus tag: PSPTOA0036 Name: COG579 Funciton: 2-hydroxyglutarate dehydrogenase Locus tag: PSPTOA0037 Name: sdaP Funciton: Predicted glucarate/galactarate transporter, MFS superfamily
	PSPTOA0036	COG579	2-hydroxyglutarate dehydrogenase
	PSPTOA0037	sdaP	Predicted glucarate/galactarate transporter, MFS superfamily
Position: -29 Score: 4.3 Sequence: TGATTGTCTGACAACAG Locus tag: PSPTOA0035 Name: sdaR Funciton: Predicted regulator of D-glucarate/D-galactarate utilization, GntR family
	PSPTOA0035	sdaR	Predicted regulator of D-glucarate/D-galactarate utilization, GntR family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD