Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PsiR in Rhizobium sp. NGR234

Properties
Regulator type: Transcription factor
TF locus tag: NGR_b11520
Regulator family: LacI
Regulation mode:
Biological process: Psicose utilization
Effector: Psicose
Regulog: PsiR - Rhizobiales
Statistics of regulated genes:
- Genes 8
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 16 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -173
Score: 6.6
Sequence: TTGCACCATCGATTGTGCAA
Position: -151
Score: 5.2
Sequence: AAGAAATATCGATTGTGCAG
Locus tag: NGR_b11530
Name: psiA
Funciton: Predicted psicose ABC transporter, substrate-binding protein
Locus tag: NGR_b11540
Name: psiB
Funciton: Predicted psicose ABC transporter, ATP-binding protein
Locus tag: NGR_b11550
Name: psiC
Funciton: Predicted psicose ABC transporter, inner membrane protein
Locus tag: NGR_b11560
Name: psiD
Funciton: Predicted psicose ABC transporter, inner membrane protein
Locus tag: NGR_b11570
Name: psiE
Funciton: Fructose:psicose-3-epimerase (EC 5.3.1.-)
Locus tag: NGR_b11580
Name: psiK
Funciton: Predicted fructokinase, FGGY family
Locus tag: NGR_b11590
Name: fucA
Funciton: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
psiA
Predicted psicose ABC transporter, substrate-binding protein
psiB
Predicted psicose ABC transporter, ATP-binding protein
psiC
Predicted psicose ABC transporter, inner membrane protein
psiD
Predicted psicose ABC transporter, inner membrane protein
psiE
Fructose:psicose-3-epimerase (EC 5.3.1.-)
psiK
Predicted fructokinase, FGGY family
fucA
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Position: -109
Score: 5.2
Sequence: CTGCACAATCGATATTTCTT
Position: -87
Score: 6.6
Sequence: TTGCACAATCGATGGTGCAA
Locus tag: NGR_b11520
Name: psiR
Funciton: Predicted transcriptional regulator for psicose utilization, LacI family
psiR
Predicted transcriptional regulator for psicose utilization, LacI family
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD