Regulon of LexA in Clostridium scindens ATCC 35704

Properties
Regulator type:	Transcription factor
TF locus tag:	CLOSCI_00491
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Clostridia-3
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 102 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -129 Score: 4.8 Sequence: GAAAACATTTGTTTGT Position: -81 Score: 4.8 Sequence: TCGAACGCATGTTTGT Position: -44 Score: 4.9 Sequence: TCGAACATATTTTCTA Locus tag: CLOSCI_00491 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	CLOSCI_00491	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -38 Score: 5 Sequence: ACGAACGTTCGTTCGA Locus tag: CLOSCI_01391 Name: recA Funciton: Recombination protein A Locus tag: CLOSCI_01392 Name: recX Funciton: regulatory protein RecX
	CLOSCI_01391	recA	Recombination protein A
	CLOSCI_01392	recX	regulatory protein RecX
Position: -66 Score: 5.4 Sequence: AAGAACATATGTTTGT Position: -37 Score: 5.1 Sequence: ACAAACGTATGTTCTT Locus tag: CLOSCI_01206 Name: COG4277 Funciton: Predicted DNA-binding protein with the Helix-hairpin-helix motif Locus tag: CLOSCI_01207 Name: BACPEC_02112 Funciton: Uracil-DNA glycosylase, family 1
	CLOSCI_01206	COG4277	Predicted DNA-binding protein with the Helix-hairpin-helix motif
	CLOSCI_01207	BACPEC_02112	Uracil-DNA glycosylase, family 1
Position: -141 Score: 4.9 Sequence: TAGAAAATATGTTCGA Position: -104 Score: 4.8 Sequence: ACAAACATGCGTTCGA Position: -56 Score: 4.8 Sequence: ACAAACAAATGTTTTC Locus tag: CLOSCI_00492 Name: PF01476 Funciton: Peptidoglycan-binding lysin domain
	CLOSCI_00492	PF01476	Peptidoglycan-binding lysin domain

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD