Regulon of NihR in Lactobacillus plantarum WCFS1

Properties
Regulator type:	Transcription factor
TF locus tag:	lp_0103
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nickel homeostasis
Effector:
Regulog:	NihR - Lactobacillaceae
Statistics of regulated genes:
- Genes	6
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 10 sites [see more]

Member of regulog collections

By taxonomy - Lactobacillaceae
By TF family - CRP
By pathway - Nickel homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -120 Score: 4.8 Sequence: GTATACATTTGTTAAC Locus tag: lp_0104 Name: PF09861 Funciton: Conserved hypothetical protein, PF09861 family Locus tag: lp_0105 Name: PF00731 Funciton: Predicted enzyme, PF00731 family
	lp_0104	PF09861	Conserved hypothetical protein, PF09861 family
	lp_0105	PF00731	Predicted enzyme, PF00731 family
Position: -148 Score: 4.8 Sequence: GTTAACAAATGTATAC Locus tag: lp_0103 Name: nihR Funciton: Predicted transcriptional regulator for nickel homeostasis, Crp family Locus tag: lp_0102 Name: nikM Funciton: Nickel ECF transporter, substrate-binding protein Locus tag: lp_0101 Name: nikQ Funciton: Nickel ECF transporter, transmembrane component Locus tag: lp_0100 Name: nikO Funciton: Nickel ECF transporter, ATP-binding protein
	lp_0103	nihR	Predicted transcriptional regulator for nickel homeostasis, Crp family
	lp_0102	nikM	Nickel ECF transporter, substrate-binding protein
	lp_0101	nikQ	Nickel ECF transporter, transmembrane component
	lp_0100	nikO	Nickel ECF transporter, ATP-binding protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD