Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Crp in Bacteroides uniformis ATCC 8492

Properties
Regulator type: Transcription factor
TF locus tag: BACUNI_04721
Regulator family: CRP
Regulation mode: activator
Biological process:
Effector:
Regulog: Crp - Bacteroidaceae
Statistics of regulated genes:
- Genes 30
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 113 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -26
Score: 5.1
Sequence: ACTTATGTTGTAAAATATATAT
Locus tag: BACUNI_01486
Name: PF00722
Funciton: Glycoside hydrolase, family 16
Locus tag: BACUNI_01485
Name: PF02836
Funciton: Glycoside hydrolase, family 2
Locus tag: BACUNI_01484
Name: PF00933
Funciton: Glycoside hydrolase, family 3
BACUNI_01486
PF00722
Glycoside hydrolase, family 16
BACUNI_01485
PF02836
Glycoside hydrolase, family 2
BACUNI_01484
PF00933
Glycoside hydrolase, family 3
Position: -225
Score: 5
Sequence: TTTTGTGTTATATAACATGTTG
Locus tag: BACUNI_01489
Name: susC_Crp-3
Funciton: TonB-dependent outer membrane transporter of oligosaccharides
Locus tag: BACUNI_01488
Name: susD_Crp-3
Funciton: Outer membrane polysaccharide binding protein for oligosaccharides
Locus tag: BACUNI_01487
Name: BACCELL_03482
Funciton: Galactose-binding domain-like
BACUNI_01489
susC_Crp-3
TonB-dependent outer membrane transporter of oligosaccharides
BACUNI_01488
susD_Crp-3
Outer membrane polysaccharide binding protein for oligosaccharides
BACUNI_01487
BACCELL_03482
Galactose-binding domain-like
Position: -125
Score: 5.7
Sequence: TTTTGTGTTATAAAACATATAC
Locus tag: BACUNI_03316
Name: null
Funciton: hypothetical protein
BACUNI_03316
hypothetical protein
Position: -117
Score: 6.2
Sequence: TTTTATGCTGTTCAACATAAAA
Locus tag: BACUNI_04526
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: BACUNI_04527
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
BACUNI_04526
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
BACUNI_04527
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -33
Score: 4.7
Sequence: ATTTGTGCTGTATAACACAGTT
Locus tag: BACUNI_04721
Name: crp
Funciton: transcriptional regulator, Crp/Fnr family
BACUNI_04721
crp
transcriptional regulator, Crp/Fnr family
Position: -75
Score: 6.2
Sequence: TTTTATGTTATTTAGCATAAAT
Locus tag: BACUNI_00649
Name: serB
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
BACUNI_00649
serB
Phosphoserine phosphatase (EC 3.1.3.3)
Position: -91
Score: 5.5
Sequence: GTATATGTTACACAACATATAC
Locus tag: BACUNI_03327
Name: xylD
Funciton: Endo-1,4-beta-xylanase D
Locus tag: BACUNI_03328
Name: GH97
Funciton: Alpha-glucosidase, glycoside hydrolase family 97
BACUNI_03327
xylD
Endo-1,4-beta-xylanase D
BACUNI_03328
GH97
Alpha-glucosidase, glycoside hydrolase family 97
Position: -92
Score: 4.1
Sequence: AATAATGCTTTATAATATTATA
Locus tag: BACUNI_00695
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACUNI_00694
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BACUNI_00693
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BACUNI_00692
Name: xylE
Funciton: D-xylose proton-symporter XylE
BACUNI_00695
xylR
Predicted regulator of xylose utilization, NrtR family
BACUNI_00694
xylB
Xylulose kinase (EC 2.7.1.17)
BACUNI_00693
xylA
Xylose isomerase (EC 5.3.1.5)
BACUNI_00692
xylE
D-xylose proton-symporter XylE
Position: -245
Score: 5
Sequence: CAGCATGTTATATAACATAAAC
Locus tag: BACUNI_01546
Name: nupG
Funciton: Nucleoside permease NupG
BACUNI_01546
nupG
Nucleoside permease NupG
Position: -48
Score: 5.7
Sequence: ACTTATGTTGCATAACATATAA
Locus tag: BACUNI_01357
Name: araM
Funciton: Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
Locus tag: BACUNI_01358
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter
Locus tag: BACUNI_01359
Name: araR
Funciton: Predicted transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BACUNI_01360
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BACUNI_01361
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BACUNI_01362
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
BACUNI_01357
araM
Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
BACUNI_01358
araP
Predicted sodium-dependent arabinose transporter
BACUNI_01359
araR
Predicted transcriptional regulator for arabinose utilization, NrtR family
BACUNI_01360
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
BACUNI_01361
araA
L-arabinose isomerase (EC 5.3.1.4)
BACUNI_01362
araB
Ribulokinase (EC 2.7.1.16)
Position: -230
Score: 5
Sequence: TAATATGTTACACAAAAGATAT
Position: -97
Score: 5.8
Sequence: TTTTCTGTTATAGAACAGAATT
Locus tag: BACUNI_03999
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BACUNI_04000
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BACUNI_04001
Name: PF03372
Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BACUNI_04002
Name: PF01432
Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BACUNI_04003
Name: secDF
Funciton: Preprotein translocase subunits SecD-SecF
BACUNI_03999
PF01694
Peptidase S54, rhomboid domain
BACUNI_04000
PF01694
Peptidase S54, rhomboid domain
BACUNI_04001
PF03372
Endonuclease/exonuclease/phosphatase
BACUNI_04002
PF01432
Peptidase M3A/M3B, thimet/oligopeptidase F
BACUNI_04003
secDF
Preprotein translocase subunits SecD-SecF
Position: -105
Score: 5.3
Sequence: TAACGTGTTGTATAACATAAAT
Locus tag: BACUNI_02281
Name: PF09719
Funciton: Putative redox-active protein (C_GCAxxG_C_C)
BACUNI_02281
PF09719
Putative redox-active protein (C_GCAxxG_C_C)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise