Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NarP in Vibrio cholerae O1 biovar eltor str. N16961

Properties
Regulator type: Transcription factor
TF locus tag:
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Regulog: NarP - Vibrionales
Statistics of regulated genes:
- Genes 26
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 135 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -232
Score: 4.8
Sequence: TACCCATTTAGGGCTA
Locus tag: VC1024
Name: moaA
Funciton: Molybdenum cofactor biosynthesis protein MoaA
Locus tag: VC1025
Name: moaB
Funciton: Molybdenum cofactor biosynthesis protein MoaB
Locus tag: VC1026
Name: moaC
Funciton: Molybdenum cofactor biosynthesis protein MoaC
Locus tag: VC1027
Name: moaD
Funciton: Molybdenum cofactor biosynthesis protein MoaD
Locus tag: VC1028
Name: moaE
Funciton: Molybdenum cofactor biosynthesis protein MoaE
VC1024
moaA
Molybdenum cofactor biosynthesis protein MoaA
VC1025
moaB
Molybdenum cofactor biosynthesis protein MoaB
VC1026
moaC
Molybdenum cofactor biosynthesis protein MoaC
VC1027
moaD
Molybdenum cofactor biosynthesis protein MoaD
VC1028
moaE
Molybdenum cofactor biosynthesis protein MoaE
Position: -95
Score: 5.1
Sequence: TACCTCTTAGGAGGTA
Position: -21
Score: 4.4
Sequence: TAGCCCTAAAGAGGTG
Locus tag: VCA0675
Name: narQ
Funciton: Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
VCA0675
narQ
Nitrate/nitrite sensor protein NarQ (EC 2.7.3.-)
Position: -192
Score: 4.1
Sequence: TACCACTTGTTAGGTA
Locus tag: VC2033
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
VC2033
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -133
Score: 4.7
Sequence: TACCACTTAATGGGTG
Locus tag: VC2656
Name: frdA
Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: VC2657
Name: frdB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: VC2658
Name: frdC
Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: VC2659
Name: frdD
Funciton: Fumarate reductase subunit D (EC 1.3.5.4)
VC2656
frdA
Fumarate reductase subunit A (EC 1.3.5.4)
VC2657
frdB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
VC2658
frdC
Fumarate reductase subunit C (EC 1.3.5.4)
VC2659
frdD
Fumarate reductase subunit D (EC 1.3.5.4)
Position: -61
Score: 3.9
Sequence: CTACCCTTTAGGGTTA
Locus tag: VC1434
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
VC1434
fnr
Fumarate and nitrate reduction regulatory protein, Crp family
Position: -152
Score: 4.5
Sequence: CACCTCTTTAGGGCTA
Position: -78
Score: 5.1
Sequence: TACCTCCTAAGAGGTA
Locus tag: VCA0676
Name: napF
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Locus tag: VCA0677
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: VCA0678
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: VCA0679
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: VCA0680
Name: napC
Funciton: Cytochrome c-type protein NapC
VCA0676
napF
Periplasmic nitrate reductase, ferredoxin-type protein NapF
VCA0677
napD
Periplasmic nitrate reductase component NapD
VCA0678
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
VCA0679
napB
Nitrate reductase cytochrome c550-type subunit
VCA0680
napC
Cytochrome c-type protein NapC
Position: -46
Score: 5.2
Sequence: TACCCCAAAAGGGGTA
Locus tag: VC1951
Name: torY
Funciton: Biotin sulfoxide reductase, cytochrome c-type
Locus tag: VC1950
Name: torZ
Funciton: Biotin sulfoxide reductase
VC1951
torY
Biotin sulfoxide reductase, cytochrome c-type
VC1950
torZ
Biotin sulfoxide reductase
Position: -144
Score: 4.4
Sequence: TAACTACAAAGGGTTA
Locus tag: VC2057
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: VC2056
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: VC2055
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: VC2054
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: VC2053
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: VC2052
Name: ccmF
Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: VC2051
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
VC2057
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
VC2056
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
VC2055
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
VC2054
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
VC2053
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
VC2052
ccmF
Cytochrome c heme lyase, subunit CcmF
VC2051
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
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