Regulon of TPP in Vibrio shilonii AK1

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Vibrionales
Under regulation:
- Genes	14
- Operons	3

Member of regulog collections

By taxonomy - Vibrionales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -217 Score: 78 Sequence: TCAATACTTGTCGGA... Locus tag: VSAK1_24309 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: VSAK1_24304 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: VSAK1_24299 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: VSAK1_24294 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: VSAK1_24289 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: VSAK1_24284 Name: thiH Funciton: Thiazole biosynthesis protein ThiH
	VSAK1_24309	thiC	Thiamin biosynthesis protein ThiC
	VSAK1_24304	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	VSAK1_24299	thiF	Sulfur carrier protein adenylyltransferase ThiF
	VSAK1_24294	thiS	Sulfur carrier protein ThiS
	VSAK1_24289	thiG	Thiazole biosynthesis protein ThiG
	VSAK1_24284	thiH	Thiazole biosynthesis protein ThiH
Position: -171 Score: 71.3 Sequence: CTCATTAGTCGGGGA... Locus tag: VSAK1_11975 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: VSAK1_11980 Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component Locus tag: VSAK1_11985 Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component Locus tag: VSAK1_11990 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Locus tag: VSAK1_11995 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
	VSAK1_11975	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	VSAK1_11980	thiZ	Hydroxymethylpyrimidine ABC transporter, ATPase component
	VSAK1_11985	thiX	Hydroxymethylpyrimidine ABC transporter, transmembrane component
	VSAK1_11990	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	VSAK1_11995	tenA	Thiaminase II (EC 3.5.99.2)
Position: -160 Score: 68.3 Sequence: TGTGACTCACGGGGT... Locus tag: VSAK1_01889 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: VSAK1_01894 Name: thiP Funciton: Thiamin ABC transporter, transmembrane component Locus tag: VSAK1_01899 Name: thiQ Funciton: Thiamin ABC transporter, ATPase component
	VSAK1_01889	thiB	Thiamin ABC transporter, substrate-binding component
	VSAK1_01894	thiP	Thiamin ABC transporter, transmembrane component
	VSAK1_01899	thiQ	Thiamin ABC transporter, ATPase component

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD