Regulon of T-box(Met) in Lactobacillus fermentum IFO 3956

Properties
Regulator type:	RNA regulatory element
Name:	T-box
RFAM:	RF00230
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Met-tRNA
Regulog:	T-box(Met) - Lactobacillaceae
Under regulation:
- Genes	13
- Operons	6

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - T-box
By effector - Met-tRNA
By pathway - Amino acid metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -284 Score: 72.8 Sequence: GAAAAGTTAGAAAGA... Locus tag: LAF_0793 Name: metQ2 Funciton: Methionine ABC transporter substrate-binding protein Locus tag: LAF_0794 Name: msrA Funciton: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
	LAF_0793	metQ2	Methionine ABC transporter substrate-binding protein
	LAF_0794	msrA	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
Position: -280 Score: 76.1 Sequence: TGTTCACGTTGATGA... Locus tag: LAF_0814 Name: metB Funciton: Cystathionine gamma-lyase (EC 4.4.1.1) Locus tag: LAF_0815 Name: metI Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
	LAF_0814	metB	Cystathionine gamma-lyase (EC 4.4.1.1)
	LAF_0815	metI	Cystathionine gamma-synthase (EC 2.5.1.48)
Position: -317 Score: 90.3 Sequence: AAAACATATCGAAAA... Locus tag: LAF_0053 Name: metQ Funciton: Methionine ABC transporter substrate-binding protein Locus tag: LAF_0054 Name: metN Funciton: Methionine ABC transporter ATP-binding protein Locus tag: LAF_0055 Name: metP Funciton: Methionine ABC transporter permease protein Locus tag: LAF_0056 Name: hmrB Funciton: N-acyl-L-amino acid amidohydrolase
	LAF_0053	metQ	Methionine ABC transporter substrate-binding protein
	LAF_0054	metN	Methionine ABC transporter ATP-binding protein
	LAF_0055	metP	Methionine ABC transporter permease protein
	LAF_0056	hmrB	N-acyl-L-amino acid amidohydrolase
Position: -328 Score: 81.7 Sequence: ATAAGTTGCTGAGAA... Locus tag: LAF_0302 Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
	LAF_0302	metE2	Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Position: -274 Score: 80.5 Sequence: ATAAATTTCGTTGAT... Locus tag: LAF_0826 Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46) Locus tag: LAF_0825 Name: hom Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
	LAF_0826	metA	Homoserine O-succinyltransferase (EC 2.3.1.46)
	LAF_0825	hom	Homoserine dehydrogenase (EC 1.1.1.3)
Position: -316 Score: 72.1 Sequence: AGAAACAGCTGAGAA... Locus tag: LAF_1601 Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14) Locus tag: LAF_1600 Name: rhc Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
	LAF_1601	metE2	Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
	LAF_1600	rhc	S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD