Regulon of VanR in Agrobacterium tumefaciens str. C58 (Cereon)

Properties
Regulator type:	Transcription factor
TF locus tag:	Atu1419
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Vanillate utilization
Effector:	Vanillate
Regulog:	VanR - Rhizobiales
Statistics of regulated genes:
- Genes	3
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 18 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By trascription factor - VanR
By TF family - GntR/Others
By effector - Vanillate
By pathway - Vanillate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -279 Score: 4.9 Sequence: TGTATACA Position: -195 Score: 4.1 Sequence: TGAATACA Position: -79 Score: 4.9 Sequence: TGTATACA Locus tag: Atu1419 Name: vanR Funciton: Transcriptional regulator for ferulate or vanillate catabolism, GntR family
	Atu1419	vanR	Transcriptional regulator for ferulate or vanillate catabolism, GntR family
Position: -236 Score: 4.9 Sequence: TGTATACA Position: -120 Score: 4.1 Sequence: TGTATTCA Position: -36 Score: 4.9 Sequence: TGTATACA Locus tag: Atu1418 Name: metF Funciton: methylenetetrahydrofolate reductase
	Atu1418	metF	methylenetetrahydrofolate reductase
Position: -225 Score: 4.1 Sequence: TGAATACA Position: -37 Score: 4.9 Sequence: TGTATACA Locus tag: Atu1420 Name: gcvT Funciton: vanillate/3-O-methylgallate O-demethylase
	Atu1420	gcvT	vanillate/3-O-methylgallate O-demethylase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD