Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PsrA in Pseudomonas putida KT2440

Properties
Regulator type: Transcription factor
TF locus tag: PP2144
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Regulog: PsrA - Pseudomonadaceae
Statistics of regulated genes:
- Genes 13
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 69 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -54
Score: 5
Sequence: ATTCAAACGGCTGTTTAATG
Locus tag: PP2008
Name: fadH
Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
PP2008
fadH
2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -83
Score: 5.5
Sequence: TTTCAAACGACTGTTTGAGC
Locus tag: PP4195
Name: null
Funciton: Proteinase inhibitor
PP4195
Proteinase inhibitor
Position: -161
Score: 5.7
Sequence: AATCAAACGGGCGTATGAAT
Locus tag: PP2136
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: PP2137
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
PP2136
fadB
Enoyl-CoA hydratase (EC 4.2.1.17)
PP2137
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Position: -73
Score: 5.8
Sequence: TTTCAAACAACTGTTTGATC
Locus tag: PP0368
Name: acdH1
Funciton: probable acyl-CoA dehydrogenase
PP0368
acdH1
probable acyl-CoA dehydrogenase
Position: -54
Score: 5
Sequence: GCTGAAACGTATGTTTCAAA
Position: -41
Score: 5.7
Sequence: TTTCAAACACCTGTTTGTCT
Locus tag: PP2144
Name: psrA
Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
PP2144
psrA
Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
Position: -163
Score: 5.9
Sequence: ATTCAAACAAACGTTTGTAT
Locus tag: PP4203
Name: etfD
Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
PP4203
etfD
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -98
Score: 5.3
Sequence: TTTCAAACAACCTTTTCAAA
Position: -85
Score: 5.7
Sequence: TTTCAAACGCTTGTATGTTT
Locus tag: PP3923
Name: null
Funciton: Phosphoglycerate mutase family protein
Locus tag: PP3924
Name: scp
Funciton: Sterol-binding domain protein
PP3923
Phosphoglycerate mutase family protein
PP3924
scp
Sterol-binding domain protein
Position: -182
Score: 5.2
Sequence: TATTAAACACTTGTATGAAC
Locus tag: PP0191
Name: algQ
Funciton: Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
PP0191
algQ
Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
Position: -392
Score: 5.6
Sequence: ATACAAACGTTTGTTTGAAT
Locus tag: PP4202
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: PP4201
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
PP4202
etfB
Electron transfer flavoprotein, beta subunit
PP4201
etfA
Electron transfer flavoprotein, alpha subunit
Position: -431
Score: 5.1
Sequence: CTTCAAACGGTAGTTTGAAT
Locus tag: PP1623
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
PP1623
rpoS
RNA polymerase sigma factor RpoS
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