Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PsrA in Chromohalobacter salexigens DSM 3043

Properties
Regulator type: Transcription factor
TF locus tag: Csal_2069
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Regulog: PsrA - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes 13
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 67 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -132
Score: 5
Sequence: ATTAAAACAAACGTTTGCTC
Locus tag: Csal_3004
Name: fadL
Funciton: Long-chain fatty acid transport protein
Csal_3004
fadL
Long-chain fatty acid transport protein
Position: -101
Score: 5
Sequence: AATCAAACGAACGCTTGACT
Position: -61
Score: 5.6
Sequence: TTTCAAACGCATGTTTGATG
Locus tag: Csal_2431
Name: acdH3
Funciton: acyl-CoA dehydrogenase-like protein
Csal_2431
acdH3
acyl-CoA dehydrogenase-like protein
Position: -61
Score: 5.3
Sequence: GTTCATACAGTTGTTTGAAA
Locus tag: Csal_0879
Name: fadH
Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Csal_0879
fadH
2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -246
Score: 5.7
Sequence: TTTTAAACGGTTGTTTGATT
Position: -65
Score: 5
Sequence: TATCAAACGCTTGAATGAAT
Locus tag: Csal_1613
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Csal_1614
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Csal_1613
etfB
Electron transfer flavoprotein, beta subunit
Csal_1614
etfA
Electron transfer flavoprotein, alpha subunit
Position: -39
Score: 5.6
Sequence: ATTCAAACGCTCGTTAGAAT
Locus tag: Csal_1510
Name: fadE
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Csal_1510
fadE
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -36
Score: 5
Sequence: ATTCACACATACGTTTGCAT
Locus tag: Csal_2644
Name: null
Funciton: acyl-CoA dehydrogenase-like protein
Csal_2644
acyl-CoA dehydrogenase-like protein
Position: -59
Score: 5.7
Sequence: TATGAAACATTTGTTTGAAA
Locus tag: Csal_1939
Name: scp
Funciton: Sterol-binding domain protein
Csal_1939
scp
Sterol-binding domain protein
Position: -249
Score: 5.1
Sequence: TTTTAATCGTCTGTTTTAAT
Locus tag: Csal_1468
Name: fadD
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Csal_1468
fadD
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -108
Score: 6
Sequence: ATTCAAACGATTGTATGAAA
Locus tag: Csal_2393
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: Csal_2392
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Csal_2393
fadB
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Csal_2392
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -127
Score: 5.7
Sequence: AATCAAACAACCGTTTAAAA
Locus tag: Csal_1612
Name: etfD
Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Csal_1612
etfD
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -36
Score: 4.9
Sequence: TTTTAAACATTCGTTTATTC
Locus tag: Csal_2069
Name: psrA
Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
Csal_2069
psrA
Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
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