Regulon of PsrA in Idiomarina loihiensis L2TR

Properties
Regulator type:	Transcription factor
TF locus tag:	IL0918
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid degradation
Effector:	Oleate
Regulog:	PsrA - Alteromonadales
Statistics of regulated genes:
- Genes	9
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - PsrA
By TF family - TetR
By effector - Oleate
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -62 Score: 5.5 Sequence: GTTTAAACAAGCGTTTAAAT Locus tag: IL1963 Name: null Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	IL1963		Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -133 Score: 5.8 Sequence: ATTCAAACGCATGTTTAAAT Locus tag: IL0011 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: IL0010 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	IL0011	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	IL0010	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -110 Score: 5 Sequence: TGATAAACGCCCGTTTAAAT Locus tag: IL1314 Name: ldh Funciton: Leucine dehydrogenase (EC 1.4.1.9)
	IL1314	ldh	Leucine dehydrogenase (EC 1.4.1.9)
Position: -104 Score: 5.7 Sequence: AATTAAACACCCGTTTAAAA Locus tag: IL1748 Name: fadH1 Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	IL1748	fadH1	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -97 Score: 5 Sequence: ATTCAAACGCCCGTTCAATT Locus tag: IL1665 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	IL1665	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -38 Score: 5.3 Sequence: GATTAAACGCATGTTTAAAT Locus tag: IL0918 Name: psrA Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family Locus tag: IL0917 Name: fadE1 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	IL0918	psrA	Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
	IL0917	fadE1	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -30 Score: 5.7 Sequence: AATCAAACAGTCGTTTAAAT Locus tag: IL0656 Name: null Funciton: putative acyl-CoA thioesterase, TesB family
	IL0656		putative acyl-CoA thioesterase, TesB family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD