Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Desulfohalobium retbaense DSM 5692

Properties
Regulator type: Transcription factor
TF locus tag: Dret_2085
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Desulfovibrionales
Statistics of regulated genes:
- Genes 34
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 107 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -11
Score: 4.6
Sequence: CTTGTGAATGAATGCACGAA
Locus tag: Dret_2089
Name: atpI1
Funciton: ATP synthase protein I
Locus tag: Dret_2088
Name: atpI2
Funciton: ATP synthase protein I2
Locus tag: Dret_2087
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: Dret_2086
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Dret_2089
atpI1
ATP synthase protein I
Dret_2088
atpI2
ATP synthase protein I2
Dret_2087
atpB
ATP synthase A chain (EC 3.6.3.14)
Dret_2086
atpE
ATP synthase C chain (EC 3.6.3.14)
Position: -19
Score: 4.5
Sequence: ATTGTGAAATTTAGAGCAAA
Locus tag: Dret_2085
Name: rex
Funciton: Redox-sensing transcriptional repressor Rex
Dret_2085
rex
Redox-sensing transcriptional repressor Rex
Position: -29
Score: 4.8
Sequence: TTTGTGAAATTTTTCTTCAG
Locus tag: Dret_1683
Name: adk
Funciton: Adenylate kinase (EC 2.7.4.3)
Dret_1683
adk
Adenylate kinase (EC 2.7.4.3)
Position: -176
Score: 4.8
Sequence: ATCGTGAAATTTTTCATGAG
Position: -102
Score: 4.7
Sequence: CTCGTGAAATTGTGCACAGG
Locus tag: Dret_0270
Name: qrcA
Funciton: cytochrome c class III family protein
Locus tag: Dret_0271
Name: qrcB
Funciton: molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
Locus tag: Dret_0272
Name: qrcC
Funciton: molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
Locus tag: Dret_0273
Name: qrcD
Funciton: molybdopterin oxidoreductase, transmembrane subunit, putative
Dret_0270
qrcA
cytochrome c class III family protein
Dret_0271
qrcB
molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
Dret_0272
qrcC
molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
Dret_0273
qrcD
molybdopterin oxidoreductase, transmembrane subunit, putative
Position: -273
Score: 4.8
Sequence: CTTGTGCAATAGCGCACAAG
Position: -130
Score: 5.1
Sequence: ATTGATAAAAAAATCACAAA
Locus tag: Dret_1968
Name: sat
Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Dret_1968
sat
Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Position: -84
Score: 5.3
Sequence: TTTGTGCTATTTGGCACAAA
Locus tag: Dret_1594
Name: ppaC
Funciton: Manganese-dependent inorganic pyrophosphatase
Dret_1594
ppaC
Manganese-dependent inorganic pyrophosphatase
Position: -167
Score: 4.4
Sequence: CTTGCGCTAAATTTCACTTT
Locus tag: Dret_1967
Name: apsB
Funciton: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Locus tag: Dret_1966
Name: apsA
Funciton: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Locus tag: Dret_1965
Name: qmoA
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit A
Locus tag: Dret_1964
Name: qmoB
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit B
Locus tag: Dret_1963
Name: qmoC
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit C
Locus tag: Dret_1962
Name: null
Funciton: hypothetical protein
Dret_1967
apsB
Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Dret_1966
apsA
Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Dret_1965
qmoA
quinone-interacting membrane-bound oxidoreductase complex subunit A
Dret_1964
qmoB
quinone-interacting membrane-bound oxidoreductase complex subunit B
Dret_1963
qmoC
quinone-interacting membrane-bound oxidoreductase complex subunit C
Dret_1962
hypothetical protein
Position: -109
Score: 4.1
Sequence: GTTGTACGAAAAATCACAAT
Locus tag: Dret_0244
Name: dsrA
Funciton: Sulfite reductase alpha subunit (EC 1.8.99.1)
Locus tag: Dret_0245
Name: dsrB
Funciton: Sulfite reductase beta subunit (EC 1.8.99.1)
Locus tag: Dret_0246
Name: dsrD
Funciton: Dissimilatory sulfite reductase D
Dret_0244
dsrA
Sulfite reductase alpha subunit (EC 1.8.99.1)
Dret_0245
dsrB
Sulfite reductase beta subunit (EC 1.8.99.1)
Dret_0246
dsrD
Dissimilatory sulfite reductase D
Position: -35
Score: 4.3
Sequence: TTTGAACCAAAATTCACATA
Locus tag: Dret_2217
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: Dret_2216
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: Dret_2215
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Dret_2214
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Dret_2213
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Dret_2212
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Dret_2211
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
Dret_2217
atpF1
ATP synthase B' chain (EC 3.6.3.14)
Dret_2216
atpF2
ATP synthase F0, B subunit
Dret_2215
atpH
ATP synthase delta chain (EC 3.6.3.14)
Dret_2214
atpA
ATP synthase alpha chain (EC 3.6.3.14)
Dret_2213
atpG
ATP synthase gamma chain (EC 3.6.3.14)
Dret_2212
atpD
ATP synthase beta chain (EC 3.6.3.14)
Dret_2211
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: -70
Score: 3.8
Sequence: AATGTGAAATTCGGCACACA
Locus tag: Dret_0234
Name: null
Funciton: hypothetical protein
Locus tag: Dret_0235
Name: dsrM
Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC)
Locus tag: Dret_0236
Name: dsrK
Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD)
Locus tag: Dret_0237
Name: dsrJ
Funciton: Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ (=HmeF)
Locus tag: Dret_0238
Name: dsrO
Funciton: Sulfite reduction-associated complex DsrMKJOP iron-sulfur protein DsrO (=HmeA)
Locus tag: Dret_0239
Name: dsrP
Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrP (= HmeB)
Dret_0234
hypothetical protein
Dret_0235
dsrM
Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC)
Dret_0236
dsrK
Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD)
Dret_0237
dsrJ
Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ (=HmeF)
Dret_0238
dsrO
Sulfite reduction-associated complex DsrMKJOP iron-sulfur protein DsrO (=HmeA)
Dret_0239
dsrP
Sulfite reduction-associated complex DsrMKJOP protein DsrP (= HmeB)
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