Regulon of NanR (SiaQ) in Vibrio cholerae O1 biovar eltor str. N16961

Properties
Regulator type:	Transcription factor
TF locus tag:	VC1775
Regulator family:	RpiR
Regulation mode:	repressor
Biological process:	Sialic acid utilization
Effector:	N-acetylmannosamine-6-phosphate
Regulog:	NanR (SiaQ) - Vibrionales
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By TF family - RpiR
By effector - N-acetylmannosamine-6-phosphate
By pathway - Sialic acid utilization

Regulated operons
	Locus Tag	Name	Function
Position: -118 Score: 5.9 Sequence: TTTGAAAATAATCTCCACC Locus tag: VC1779 Name: siaP Funciton: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Locus tag: VC1778 Name: siaS Funciton: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Locus tag: VC1777 Name: siaT Funciton: TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter Locus tag: VC1776 Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3) Locus tag: VC1775 Name: nanR Funciton: Sialic acid utilization regulator, RpiR family
	VC1779	siaP	TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
	VC1778	siaS	TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
	VC1777	siaT	TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
	VC1776	nanA	N-acetylneuraminate lyase (EC 4.1.3.3)
	VC1775	nanR	Sialic acid utilization regulator, RpiR family
Position: -123 Score: 5.6 Sequence: AGTGAAGATAATTTTTACT Locus tag: VC1774 Name: nanM Funciton: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Locus tag: VC1773 Name: nanM Funciton: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
	VC1774	nanM	Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
	VC1773	nanM	Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
Position: -115 Score: 5.9 Sequence: GGTGGAGATTATTTTCAAA Locus tag: VC1781 Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Locus tag: VC1782 Name: nanK Funciton: N-acetylmannosamine kinase (EC 2.7.1.60) Locus tag: VC1783 Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	VC1781	nanE	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
	VC1782	nanK	N-acetylmannosamine kinase (EC 2.7.1.60)
	VC1783	nagA	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)

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