Regulon of NtrC in Rhodospirillum rubrum ATCC 11170

Properties
Regulator type:	Transcription factor
TF locus tag:	Rru_A1678
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Rhodospirillales
Statistics of regulated genes:
- Genes	12
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 40 sites [see more]

Member of regulog collections

By taxonomy - Rhodospirillales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -162 Score: 4.6 Sequence: TGCCTAATATTTAACCA Locus tag: Rru_A1676 Name: nifR3 Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family Locus tag: Rru_A1677 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Rru_A1678 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family Locus tag: Rru_A1679 Name: ntrY Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-) Locus tag: Rru_A1680 Name: ntrX Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
	Rru_A1676	nifR3	Nitrogen assimilation transcriptional regulator NtrX, Fis family
	Rru_A1677	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Rru_A1678	ntrC	Nitrogen regulation protein NR(I), Fis family
	Rru_A1679	ntrY	Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
	Rru_A1680	ntrX	Nitrogen assimilation transcriptional regulator NtrX, Fis family
Position: -160 Score: 3.9 Sequence: TGCCCGCTTTACGGGCA Locus tag: Rru_A1129 Name: amtB Funciton: Ammonium transporter
	Rru_A1129	amtB	Ammonium transporter
Position: -153 Score: 4.5 Sequence: TGCAAAAATAATGGGCA Position: -114 Score: 3.8 Sequence: CGCCCGTATTTAAGGCA Locus tag: Rru_A2048 Name: potA Funciton: Putrescine ABC transporter, ATP-binding component (TC_3.A.1.11.1) Locus tag: Rru_A2047 Name: potD Funciton: Putrescine ABC transporter, substrate-binding component (TC_3.A.1.11.1) Locus tag: Rru_A2046 Name: potB Funciton: Putrescine ABC transporter, transmembrane component 1 (TC_3.A.1.11.1) Locus tag: Rru_A2045 Name: potC Funciton: Putrescine ABC transporter, transmembrane component 2 (TC_3.A.1.11.1)
	Rru_A2048	potA	Putrescine ABC transporter, ATP-binding component (TC_3.A.1.11.1)
	Rru_A2047	potD	Putrescine ABC transporter, substrate-binding component (TC_3.A.1.11.1)
	Rru_A2046	potB	Putrescine ABC transporter, transmembrane component 1 (TC_3.A.1.11.1)
	Rru_A2045	potC	Putrescine ABC transporter, transmembrane component 2 (TC_3.A.1.11.1)
Position: -194 Score: 4.7 Sequence: TGCCTATATTTCGGGCA Locus tag: Rru_A2085 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Rru_A2086 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Rru_A2085	glnB	Nitrogen regulatory protein P-II
	Rru_A2086	glnA	Glutamine synthetase type I (EC 6.3.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD