Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of IscR in Oceanicola batsensis HTCC2597

Properties
Regulator type: Transcription factor
TF locus tag: OB2597_03589
Regulator family: Rrf2
Regulation mode: repressor (activator)
Biological process: Iron-sulfur cluster biogenesis; Iron homeostasis
Effector: Iron-sulfur cluster redox state; Iron ion, (Fe2+)
Regulog: IscR - Rhodobacterales
Statistics of regulated genes:
- Genes 29
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 125 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -154
Score: 4.2
Sequence: ATCGACTGTTTTTGTCGGT
Position: -123
Score: 3.8
Sequence: CCCGCCCAAAACTGTCGGG
Locus tag: OB2597_09404
Name: fecB
Funciton: ABC-type Fe3+-hydroxamate transport system, periplasmic component
Locus tag: OB2597_09399
Name: fecC
Funciton: ABC-type Fe3+-siderophore transport system, permease component
Locus tag: OB2597_09394
Name: fecD
Funciton: ABC-type Fe3+-siderophore transport system, permease component
Locus tag: OB2597_09389
Name: fecE
Funciton: ABC Fe+3-siderophore transporter, ATPase subunit
Locus tag: OB2597_09384
Name: mxcB
Funciton: Siderophore-interacting protein
OB2597_09404
fecB
ABC-type Fe3+-hydroxamate transport system, periplasmic component
OB2597_09399
fecC
ABC-type Fe3+-siderophore transport system, permease component
OB2597_09394
fecD
ABC-type Fe3+-siderophore transport system, permease component
OB2597_09389
fecE
ABC Fe+3-siderophore transporter, ATPase subunit
OB2597_09384
mxcB
Siderophore-interacting protein
Position: -101
Score: 4.2
Sequence: TCTGACGGTTTTTATCAAC
Locus tag: OB2597_05460
Name: OB2597_05460
Funciton: TonB-dependent hemin, ferrichrome receptor
OB2597_05460
OB2597_05460
TonB-dependent hemin, ferrichrome receptor
Position: -166
Score: 4.7
Sequence: TCCGACTGATATAGTCACC
Locus tag: OB2597_08064
Name: ISM_05670
Funciton: Outer membrane receptor proteins, mostly Fe transport
OB2597_08064
ISM_05670
Outer membrane receptor proteins, mostly Fe transport
Position: -192
Score: 4.7
Sequence: CTTGACTAATTTGATCGGA
Position: -149
Score: 3.9
Sequence: TCCGAGTCGAATGCTCGGA
Locus tag: OB2597_05425
Name: hemP
Funciton: Hemin uptake protein HemP
Locus tag: OB2597_05430
Name: Mlr1156
Funciton: Mlr1156 protein
Locus tag: OB2597_05435
Name: exbB
Funciton: Ferric siderophore transport system, biopolymer transport protein ExbB
Locus tag: OB2597_05440
Name: exbD1
Funciton: Ferric siderophore transport system, periplasmic binding protein ExbD
Locus tag: OB2597_05445
Name: exbD2
Funciton: Ferric siderophore transport system, periplasmic binding protein ExbD
Locus tag: OB2597_05450
Name: tonB
Funciton: Ferric siderophore transport system, periplasmic binding protein TonB
OB2597_05425
hemP
Hemin uptake protein HemP
OB2597_05430
Mlr1156
Mlr1156 protein
OB2597_05435
exbB
Ferric siderophore transport system, biopolymer transport protein ExbB
OB2597_05440
exbD1
Ferric siderophore transport system, periplasmic binding protein ExbD
OB2597_05445
exbD2
Ferric siderophore transport system, periplasmic binding protein ExbD
OB2597_05450
tonB
Ferric siderophore transport system, periplasmic binding protein TonB
Position: -390
Score: 4.4
Sequence: CATGATTGTTTCAGTCGGA
Position: -318
Score: 3.8
Sequence: CCCGACAGTTTTGGGCGGG
Position: -287
Score: 4.2
Sequence: ACCGACAAAAACAGTCGAT
Locus tag: OB2597_09409
Name: RSP_3417
Funciton: Ferrichrome-iron receptor
OB2597_09409
RSP_3417
Ferrichrome-iron receptor
Position: -26
Score: 4.1
Sequence: CCTTAGTAAATCCATCGGA
Locus tag: OB2597_00425
Name: fbpC
Funciton: Ferric iron ABC transporter, ATP-binding protein
OB2597_00425
fbpC
Ferric iron ABC transporter, ATP-binding protein
Position: -134
Score: 3.8
Sequence: CTTGACGACTTTGGTCAAG
Locus tag: OB2597_03589
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR, Rrf2 family
Locus tag: OB2597_03584
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: OB2597_03579
Name: sufB
Funciton: Iron-sulfur cluster assembly protein SufB
Locus tag: OB2597_03574
Name: RSP_0439
Funciton: protein of unknown function DUF74
Locus tag: OB2597_03569
Name: null
Funciton: hypothetical protein
Locus tag: OB2597_03564
Name: sufC
Funciton: Iron-sulfur cluster assembly ATPase protein SufC
Locus tag: OB2597_03559
Name: sufD
Funciton: Iron-sulfur cluster assembly protein SufD
Locus tag: OB2597_03554
Name: RSP_0433
Funciton: hypothetical protein
Locus tag: OB2597_03549
Name: null
Funciton: hypothetical protein
Locus tag: OB2597_03544
Name: sufS
Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
OB2597_03589
iscR
Iron-sulfur cluster regulator IscR, Rrf2 family
OB2597_03584
iscS
Cysteine desulfurase (EC 2.8.1.7)
OB2597_03579
sufB
Iron-sulfur cluster assembly protein SufB
OB2597_03574
RSP_0439
protein of unknown function DUF74
OB2597_03569
hypothetical protein
OB2597_03564
sufC
Iron-sulfur cluster assembly ATPase protein SufC
OB2597_03559
sufD
Iron-sulfur cluster assembly protein SufD
OB2597_03554
RSP_0433
hypothetical protein
OB2597_03549
hypothetical protein
OB2597_03544
sufS
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Position: -125
Score: 4.1
Sequence: GTTGATCGAAAAAGTCGGA
Position: -97
Score: 4.3
Sequence: GGTGAGCAAAATAGTCAGG
Locus tag: OB2597_06825
Name: null
Funciton: hypothetical protein
Locus tag: OB2597_06820
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: OB2597_06815
Name: bfr
Funciton: Bacterioferritin (cytochrome b1)
OB2597_06825
hypothetical protein
OB2597_06820
bfd
Bacterioferritin-associated ferredoxin
OB2597_06815
bfr
Bacterioferritin (cytochrome b1)
Position: -60
Score: 4.9
Sequence: CCTGACCAAAATACTCGGA
Locus tag: OB2597_04193
Name: fbpA
Funciton: Ferric iron ABC transporter, iron-binding protein
OB2597_04193
fbpA
Ferric iron ABC transporter, iron-binding protein
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