Regulon of FadR in Pseudoalteromonas haloplanktis TAC125

Properties
Regulator type:	Transcription factor
TF locus tag:	PSHAa0838
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Alteromonadales
Statistics of regulated genes:
- Genes	6
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - FadR
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -31 Score: 5.1 Sequence: AGGTGGTCTGACCTCTA Locus tag: PSHAa1952 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	PSHAa1952	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -33 Score: 5.5 Sequence: AACAGGTCAGACCTGTC Locus tag: PSHAa0966 Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex Locus tag: PSHAa0967 Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex
	PSHAa0966	fadI	FadI component of anaerobic fatty acid oxidation complex
	PSHAa0967	fadJ	FadJ component of anaerobic fatty acid oxidation complex
Position: -18 Score: 4.8 Sequence: CACAGGTTAGACCAGTT Locus tag: PSHAa1410 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	PSHAa1410	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -67 Score: 4.3 Sequence: TGCTGGTCTGACAAGTT Locus tag: PSHAb0355 Name: tesB Funciton: Acyl-CoA thioesterase
	PSHAb0355	tesB	Acyl-CoA thioesterase
Position: -22 Score: 4.3 Sequence: ATCTGGTCGGATGAGTT Locus tag: PSHAb0374 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	PSHAb0374	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD