Regulon of Cobalamin in Shewanella sp ANA-3

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Shewanellaceae
Under regulation:
- Genes	10
- Operons	2

Member of regulog collections

By taxonomy - Shewanellaceae
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -348 Score: 58.5 Sequence: CTCAAAGGTCGCAGA... Locus tag: Shewana3_3280 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: Shewana3_3279 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: Shewana3_3278 Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: Shewana3_3277 Name: cobS Funciton: Cobalamin synthase Locus tag: Shewana3_3276 Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Locus tag: Shewana3_3275 Name: cbiP Funciton: Cobyric acid synthase Locus tag: Shewana3_3274 Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) Locus tag: Shewana3_3273 Name: Shewana3_3273 Funciton: Hypothetical protein Locus tag: Shewana3_3272 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
	Shewana3_3280	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	Shewana3_3279	btuC	Vitamin B12 ABC transporter, permease component BtuC
	Shewana3_3278	cobT	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
	Shewana3_3277	cobS	Cobalamin synthase
	Shewana3_3276	cobU	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
	Shewana3_3275	cbiP	Cobyric acid synthase
	Shewana3_3274	btuR	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
	Shewana3_3273	Shewana3_3273	Hypothetical protein
	Shewana3_3272	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
Position: -339 Score: 74.7 Sequence: TTTTTAGTCAACCTT... Locus tag: Shewana3_3472 Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
	Shewana3_3472	btuB	Outer membrane vitamin B12 receptor BtuB

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD