Regulon of KdgR in Bacillus pumilus SAFR-032

Properties
Regulator type:	Transcription factor
TF locus tag:	BPUM_3245
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Galacturonate utilization; Glucuronate utilization
Effector:	2-keto-3-deoxygluconate
Regulog:	KdgR - Bacillales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 13 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - LacI
By effector - 2-keto-3-deoxygluconate
By pathway - Galacturonate utilization
By pathway - Glucuronate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -226 Score: 5.5 Sequence: TTCGAAACCGATTTCAAA Position: -65 Score: 5.8 Sequence: CTTGAAACCGATACCAAA Locus tag: BPUM_3246 Name: kduI Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) Locus tag: BPUM_3247 Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
	BPUM_3246	kduI	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
	BPUM_3247	kduD	2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
Position: -33 Score: 6 Sequence: TTTGAAACCGGTACCAAG Locus tag: BPUM_3244 Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) Locus tag: BPUM_3243 Name: kdgA Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
	BPUM_3244	kdgK	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
	BPUM_3243	kdgA	4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Position: -215 Score: 5.8 Sequence: TTTGGTATCGGTTTCAAG Position: -54 Score: 5.5 Sequence: TTTGAAATCGGTTTCGAA Locus tag: BPUM_3245 Name: kdgR Funciton: Transcriptional regulator of pectin utilization, LacI family
	BPUM_3245	kdgR	Transcriptional regulator of pectin utilization, LacI family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD