Regulon of NtrC in Serratia proteamaculans 568

Properties
Regulator type:	Transcription factor
TF locus tag:	Spro_4883
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Enterobacteriales
Statistics of regulated genes:
- Genes	35
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 130 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -29 Score: 5.8 Sequence: TGCACTAAAAAGGTGCA Locus tag: Spro_4882 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Spro_4883 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Spro_4882	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Spro_4883	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -220 Score: 5.2 Sequence: TGCACCATTACAGTGCT Position: -188 Score: 5.2 Sequence: TGCACCATTTAAGTGCA Locus tag: Spro_4881 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Spro_4881	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -230 Score: 3.9 Sequence: TGCACCTTTAATGAGCA Locus tag: Spro_1823 Name: rutA Funciton: Pyrimidine oxygenase Locus tag: Spro_1822 Name: rutB Funciton: Peroxyureidoacrylate / ureidoacrylate amido hydrolase Locus tag: Spro_1821 Name: rutC Funciton: Aminoacrylate peracid reductase Locus tag: Spro_1820 Name: rutD Funciton: Aminoacrylate hydrolase Locus tag: Spro_1819 Name: rutF Funciton: Flavin reductase Locus tag: Spro_1818 Name: rutG Funciton: Uracil permease
	Spro_1823	rutA	Pyrimidine oxygenase
	Spro_1822	rutB	Peroxyureidoacrylate / ureidoacrylate amido hydrolase
	Spro_1821	rutC	Aminoacrylate peracid reductase
	Spro_1820	rutD	Aminoacrylate hydrolase
	Spro_1819	rutF	Flavin reductase
	Spro_1818	rutG	Uracil permease
Position: -204 Score: 4.4 Sequence: TGCCCAATTGTTGTGCA Locus tag: Spro_2345 Name: CKO_01526 Funciton: Predicted transcriptional regulator, RpiR family Locus tag: Spro_2346 Name: ddpX Funciton: D-alanyl-D-alanine dipeptidase (EC 3.4.13.-) Locus tag: Spro_2347 Name: ddpA Funciton: Dipeptide ABC transporter, substrate-binding component (TC 3.A.1.5.2) Locus tag: Spro_2348 Name: ddpB Funciton: Dipeptide ABC transporter, transmembrane component 1 (TC 3.A.1.5.2) Locus tag: Spro_2349 Name: ddpC Funciton: Dipeptide ABC transporter, transmembrane component 2 (TC 3.A.1.5.2) Locus tag: Spro_2350 Name: ddpD Funciton: Dipeptide ABC transporter, transmembrane component 3 (TC 3.A.1.5.2) Locus tag: Spro_2351 Name: ddpF Funciton: Dipeptide ABC transporter, ABC-binding component (TC 3.A.1.5.2)
	Spro_2345	CKO_01526	Predicted transcriptional regulator, RpiR family
	Spro_2346	ddpX	D-alanyl-D-alanine dipeptidase (EC 3.4.13.-)
	Spro_2347	ddpA	Dipeptide ABC transporter, substrate-binding component (TC 3.A.1.5.2)
	Spro_2348	ddpB	Dipeptide ABC transporter, transmembrane component 1 (TC 3.A.1.5.2)
	Spro_2349	ddpC	Dipeptide ABC transporter, transmembrane component 2 (TC 3.A.1.5.2)
	Spro_2350	ddpD	Dipeptide ABC transporter, transmembrane component 3 (TC 3.A.1.5.2)
	Spro_2351	ddpF	Dipeptide ABC transporter, ABC-binding component (TC 3.A.1.5.2)
Position: -192 Score: 5.3 Sequence: CGCACCAAAGTAGTGCG Locus tag: Spro_1109 Name: glnK Funciton: nitrogen regulatory protein P-II Locus tag: Spro_1110 Name: amtB Funciton: Ammonium transporter
	Spro_1109	glnK	nitrogen regulatory protein P-II
	Spro_1110	amtB	Ammonium transporter
Position: -212 Score: 4.8 Sequence: GGCACCATAAGGGTGCA Position: -183 Score: 5 Sequence: TGCATTAATTTGGTGCG Locus tag: Spro_1214 Name: gltI Funciton: Glutamate-aspartate ABC transporter, substrate-binding component Locus tag: Spro_1213 Name: gltJ Funciton: Glutamate-aspartate ABC transporter, transmembrane component 1 Locus tag: Spro_1212 Name: gltK Funciton: Glutamate-aspartate ABC transporter, transmembrane component 2 Locus tag: Spro_1211 Name: gltL Funciton: Glutamate-aspartate ABC transporter, ATP-binding component
	Spro_1214	gltI	Glutamate-aspartate ABC transporter, substrate-binding component
	Spro_1213	gltJ	Glutamate-aspartate ABC transporter, transmembrane component 1
	Spro_1212	gltK	Glutamate-aspartate ABC transporter, transmembrane component 2
	Spro_1211	gltL	Glutamate-aspartate ABC transporter, ATP-binding component
Position: -265 Score: 4.4 Sequence: CGCACTGAATTAGGGCG Position: -243 Score: 4.3 Sequence: TGCACCATAATGATCCC Locus tag: Spro_3326 Name: hisJ Funciton: Histidine ABC transporter, substrate-binding component Locus tag: Spro_3325 Name: hisQ Funciton: Histidine ABC transporter, transmembrane component 1 Locus tag: Spro_3324 Name: hisM Funciton: Histidine ABC transporter, transmembrane component 2 Locus tag: Spro_3323 Name: hisP Funciton: Histidine ABC transporter, ATP-binding component
	Spro_3326	hisJ	Histidine ABC transporter, substrate-binding component
	Spro_3325	hisQ	Histidine ABC transporter, transmembrane component 1
	Spro_3324	hisM	Histidine ABC transporter, transmembrane component 2
	Spro_3323	hisP	Histidine ABC transporter, ATP-binding component
Position: -176 Score: 4.2 Sequence: AGCACCATTTTGGGGCC Position: -163 Score: 4.3 Sequence: GGCCTCAATTTGGTGCA Locus tag: Spro_1479 Name: glnH Funciton: Glutamine ABC transporter, substrate-binding component Locus tag: Spro_1478 Name: glnP Funciton: Glutamine ABC transporter, transmembrane component Locus tag: Spro_1477 Name: glnQ Funciton: Glutamine ABC transporter, ATP-binding component
	Spro_1479	glnH	Glutamine ABC transporter, substrate-binding component
	Spro_1478	glnP	Glutamine ABC transporter, transmembrane component
	Spro_1477	glnQ	Glutamine ABC transporter, ATP-binding component
Position: -214 Score: 4.5 Sequence: AGCGCCATTTTGGTGCT Position: -195 Score: 4.5 Sequence: CGCACTTTGATGGTGCG Locus tag: Spro_0932 Name: EAM_0872 Funciton: Predicted ABC transporter, substrate-binding component Locus tag: Spro_0933 Name: EAM_0873 Funciton: Predicted ABC transporter, permease component 1 Locus tag: Spro_0934 Name: EAM_0874 Funciton: Predicted ABC transporter, permease component 2 Locus tag: Spro_0935 Name: EAM_0875 Funciton: Predicted ABC transporter, ATP-binding component Locus tag: Spro_0936 Name: pucG Funciton: Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) Locus tag: Spro_0937 Name: amaB Funciton: N-carbamoyl-L-amino acid hydrolase
	Spro_0932	EAM_0872	Predicted ABC transporter, substrate-binding component
	Spro_0933	EAM_0873	Predicted ABC transporter, permease component 1
	Spro_0934	EAM_0874	Predicted ABC transporter, permease component 2
	Spro_0935	EAM_0875	Predicted ABC transporter, ATP-binding component
	Spro_0936	pucG	Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44)
	Spro_0937	amaB	N-carbamoyl-L-amino acid hydrolase

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NtrC in Serratia proteamaculans 568

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --