Regulog YdcR - Moraxellaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes					Function

CRON 1.
PF01654	* Acinetobacter baumannii AB0057 Site: position = -377 score = 8.96017 sequence = AACTGTTATAGTTTT-(9)-TTCTGTATCTACATA Gene: AB57_1667: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Acinetobacter sp. ADP1	Psychrobacter arcticum 273-4	Psychrobacter sp. PRwf-1	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
PF02322	Acinetobacter baumannii AB0057 Gene: AB57_1666: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Acinetobacter sp. ADP1	Psychrobacter arcticum 273-4	Psychrobacter sp. PRwf-1	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)

CRON 2.
AB57_1669	* Acinetobacter baumannii AB0057 Site: position = -260 score = 6.56477 sequence = GCGTGCTATAGTTTT-(9)-ATCTGTAGCTATATA Gene: AB57_1669: hypothetical protein	* Acinetobacter sp. ADP1 Site: position = -107 score = 9.68618 sequence = AACTGTTATAGTTTT-(9)-GACTGTTTCTATTTT Gene: ACIAD2031: hypothetical protein	Psychrobacter arcticum 273-4	Psychrobacter sp. PRwf-1	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --